Mock Version: 1.4.15
Mock Version: 1.4.15
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/lammps.spec'], chrootPath='/var/lib/mock/f30-build-16475339-1180881/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff88a6ddd8>timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/lammps.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: aarch64
Building for target aarch64
Wrote: /builddir/build/SRPMS/lammps-20190605-3.fc30.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/lammps.spec'], chrootPath='/var/lib/mock/f30-build-16475339-1180881/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff88a6ddd8>timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/lammps.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: aarch64
Building for target aarch64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.r2kGXz
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf lammps-stable_5Jun2019
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-stable_5Jun2019.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd lammps-stable_5Jun2019
+ /usr/bin/tar -xof -
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-testing-827be7af84ca100d394ea1cf6d3bc49f6a8eef92.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ find . -type f '(' -name '*.cpp' -or -name '*.h' ')' -exec sed -e '/#pragma omp/s/default(none)/default(shared)/' -e '/#pragma omp/s/shared([^)]\+)//' -i '{}' +
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.v84QTy
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ . /etc/profile.d/modules.sh
BUILDSTDERR: ++ '[' -z '' ']'
BUILDSTDERR: ++ '[' -z /usr/share/modulefiles ']'
BUILDSTDERR: ++ PS_CMD=/usr/bin/ps
BUILDSTDERR: ++ '[' '!' -x /usr/bin/ps ']'
BUILDSTDERR: ++ EXPR_CMD=/usr/bin/expr
BUILDSTDERR: ++ '[' '!' -x /usr/bin/expr ']'
BUILDSTDERR: ++ BASENAME_CMD=/usr/bin/basename
BUILDSTDERR: ++ '[' '!' -x /usr/bin/basename ']'
BUILDSTDERR: +++ /usr/bin/ps -p 18585 -ocomm=
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/expr sh : '-*\(.*\)'
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/basename sh
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: ++ '[' -f /usr/share/lmod/lmod/init/sh ']'
BUILDSTDERR: ++ . /usr/share/lmod/lmod/init/sh
BUILDSTDERR: +++ LMOD_PKG=/usr/share/lmod/lmod
BUILDSTDERR: +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
BUILDSTDERR: +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
BUILDSTDERR: +++ MODULESHOME=/usr/share/lmod/lmod
BUILDSTDERR: +++ export LMOD_CMD
BUILDSTDERR: +++ export LMOD_PKG
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: +++ export MODULESHOME
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ for mpi in '' mpich openmpi
+ test -n ''
+ mkdir -p serial
+ pushd serial
~/build/BUILD/lammps-stable_5Jun2019/serial ~/build/BUILD/lammps-stable_5Jun2019
+ cp -al ../lammps-testing-827be7af84ca100d394ea1cf6d3bc49f6a8eef92 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
BUILDSTDERR: ++ test -n ''
+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.7/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64 -DLAMMPS_MACHINE= -DLAMMPS_LIB_SUFFIX= -DCMAKE_INSTALL_MANDIR=/usr/share/man -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_5Jun2019/serial/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 9.1.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- The C compiler identification is GNU 9.1.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Running test discovery...
-- Found 53 tests.
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.6.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found PythonLibs: /usr/lib64/libpython3.7m.so (found version "3.7.3") 
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.36") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib64/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.0.2
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.8.20")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") 
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/atom_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/beck_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/born_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/born_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/born_coul_long_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/born_coul_wolf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/born_coul_wolf_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/buck_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/buck_coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/buck_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/charmm_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/colloid_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/coul_debye_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/coul_dsf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/coul_long_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/device_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/dipole_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/dipole_lj_sf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/dipole_long_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/dpd_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/eam_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/ellipsoid_nbor_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/gauss_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj96_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_class2_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_coul_debye_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_coul_msm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_cubic_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_dsf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_expand_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_expand_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_gromacs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_sdk_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/lj_sdk_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/mie_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/morse_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/neighbor_cpu_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/neighbor_gpu_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/pppm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/soft_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/sw_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/table_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/ufm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/vashishta_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/yukawa_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/yukawa_colloid_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/zbl_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/gayberne_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/gayberne_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/re_squared_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/re_squared_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/tersoff_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/tersoff_zbl_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.3") 
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * OpenMP
 * FFTW3
 * LAPACK
 * Threads
 * BLAS
 * PythonLibs
 * JPEG
 * PNG
 * ZLIB
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      9.1.1
   C++ Flags        -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;LMP_USER_OMP
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  9.1.1
     C Flags  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp 
-- Linker flags:
   Executable      -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
-- Shared libraries  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
-- Link libraries: mpi_stubs;/usr/lib64/libfftw3.so;/usr/lib64/libpython3.7m.so;/usr/lib64/libjpeg.so;/usr/lib64/libpng.so;/usr/lib64/libz.so;/usr/lib64/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as FFT
-- Configuring done
-- Generating done
BUILDSTDERR: CMake Warning:
BUILDSTDERR:   Manually-specified variables were not used by the project:
BUILDSTDERR:     CMAKE_CXX_FLAGS_RELEASE
BUILDSTDERR:     CMAKE_C_FLAGS_RELEASE
BUILDSTDERR:     CMAKE_Fortran_FLAGS_RELEASE
BUILDSTDERR:     INCLUDE_INSTALL_DIR
BUILDSTDERR:     LIB_INSTALL_DIR
BUILDSTDERR:     LIB_SUFFIX
BUILDSTDERR:     SHARE_INSTALL_PREFIX
BUILDSTDERR:     SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_5Jun2019/serial
+ /usr/bin/make -O -j4
/usr/bin/cmake -S/builddir/build/BUILD/lammps-stable_5Jun2019/cmake -B/builddir/build/BUILD/lammps-stable_5Jun2019/serial --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
Scanning dependencies of target mpi_stubs
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target msi2lmp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/poems.dir/DependInfo.cmake --color=
Scanning dependencies of target poems
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/colvars.dir/DependInfo.cmake --color=
Scanning dependencies of target colvars
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Linking C static library libmpi_stubs.a
/usr/bin/cmake -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1
/usr/bin/ar qc libmpi_stubs.a  CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o
/usr/bin/ranlib libmpi_stubs.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Built target mpi_stubs
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:5:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:847:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:856:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:864:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:873:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:881:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:979:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:987:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:994:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1001:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1008:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1026:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1035:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1039:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1048:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1052:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/atc.dir/DependInfo.cmake --color=
Scanning dependencies of target atc
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:5:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:479:3,
BUILDSTDERR:     inlined from 'MakeLists' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:46:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:500:7,
BUILDSTDERR:     inlined from 'MakeLists' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:46:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c: In function 'ReadCarFile':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:101:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   101 |   fgets(line,MAX_LINE_LENGTH,CarF); /* Read header line */
BUILDSTDERR:       |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:108:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   108 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Comment line */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:109:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   109 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Date stamp */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:110:5: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   110 |     fscanf(CarF,"%*s %lf %lf %lf %lf %lf %lf %*s",
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   111 |            &pbc[0],&pbc[1],&pbc[2],&pbc[3],&pbc[4],&pbc[5]);
BUILDSTDERR:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:124:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   124 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Comment line */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:125:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   125 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Date Stamp */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:146:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   146 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:180:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   180 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:189:7: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |       fscanf(CarF,"%s %lf %lf %lf %*s %d %s %s %lf",
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   190 |              atoms[k].name,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~
BUILDSTDERR:   191 |              &(atoms[k].x[0]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   192 |              &(atoms[k].x[1]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   193 |              &(atoms[k].x[2]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   194 |              &(atoms[k].molecule),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   195 |              atoms[k].potential,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   196 |              atoms[k].element,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   197 |              &(atoms[k].q));
BUILDSTDERR:       |              ~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:209:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:210:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   210 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c: In function 'SearchAndFill':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:114:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   114 |     fgets(line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:119:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |   fgets(line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:121:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   121 |     fgets( line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:223:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   223 |     fgets( line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:13:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:198:11:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:216:9:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Linking C executable msi2lmp
/usr/bin/cmake -E cmake_link_script CMakeFiles/msi2lmp.dir/link.txt --verbose=1
/usr/bin/cc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o  -o msi2lmp -lm 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Built target msi2lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/cslib.dir/DependInfo.cmake --color=
Scanning dependencies of target cslib
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp:636:11: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   636 |   int64_t bigbytes,bigbytesround;
BUILDSTDERR:       |           ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:125:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   125 |   if (me == 0) fread(lengths,sizeof(int),2,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:132:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   132 |   if (me == 0) fread(header,sizeof(int),nheader,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:135:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   135 |   if (me == 0) fread(buf,1,nbuf,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp:60:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    60 |       fgets(port,MPI_MAX_PORT_NAME,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Linking CXX static library libcsnompi.a
/usr/bin/cmake -P CMakeFiles/cslib.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/cslib.dir/link.txt --verbose=1
/usr/bin/ar qc libcsnompi.a  CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/ranlib libcsnompi.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Built target cslib
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/h5md.dir/DependInfo.cmake --color=
Scanning dependencies of target h5md
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building C object CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Linking C static library libh5md.a
/usr/bin/cmake -P CMakeFiles/h5md.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/h5md.dir/link.txt --verbose=1
/usr/bin/ar qc libh5md.a  CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o
/usr/bin/ranlib libh5md.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Built target h5md
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:35,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp:25:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Built target ocl_get_devices
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Scanning dependencies of target gpu
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   182 |     if (_ef_atom)
BUILDSTDERR:       |        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   196 |       if (_vf_atom)
BUILDSTDERR:       |          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   231 |     if (_ef_atom)
BUILDSTDERR:       |        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   250 |       if (_vf_atom)
BUILDSTDERR:       |          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:313:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
BUILDSTDERR:   224 |   int ii, vstart=0, iend=_inum;
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
BUILDSTDERR:    36 |  int data;
BUILDSTDERR:       |      ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
BUILDSTDERR:    32 |  TreeNode *left;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
BUILDSTDERR:    22 | TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
BUILDSTDERR:       | ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  0%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Linking CXX static library libpoems.a
/usr/bin/cmake -P CMakeFiles/poems.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/poems.dir/link.txt --verbose=1
/usr/bin/ar qc libpoems.a  CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o
/usr/bin/ranlib libpoems.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Built target poems
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
Scanning dependencies of target gitversion
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles" -P /builddir/build/BUILD/lammps-stable_5Jun2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Built target gitversion
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp: In instantiation of 'void LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, int, double**, int*, int*, int*, int**, bool, bool, bool, bool, int&, double, bool&) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:396:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:269:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   269 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp: In instantiation of 'int** LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, double**, int*, double*, double*, tagint*, int**, tagint**, bool, bool, bool, bool, int&, int**, int**, double, bool&) [with numtyp = float; acctyp = double; tagint = int]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:396:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:338:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   338 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::CHARMMLong<numtyp, acctyp>::init(int, double, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double, double, double*, double, double, double, double, double**, double**, bool) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:79:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp> host_write(h_size*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Colloid<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, double**, double**, double**, double**, double**, double**, double**, int**, int, int, int, int, double, double, FILE*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview_form +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:97:18: note: '*((void*)& dview_form +24)' was declared here
BUILDSTDERR:    97 |   UCL_H_Vec<int> dview_form(lj_types*lj_types,*(this->ucl_device),
BUILDSTDERR:       |                  ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp: In member function 'int LAMMPS_AL::CoulDSF<numtyp, acctyp>::init(int, int, int, int, int, double, double, FILE*, double, double*, double, double, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:83:5: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    83 |     host_write[i]=host_special_coul[i];
BUILDSTDERR:       |     ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:533:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   448 |   int eflag, vflag;
BUILDSTDERR:       |              ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'void LAMMPS_AL::GayBerne<numtyp, acctyp>::clear() [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:587:37: warning: '*((void*)& err_flag +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   587 |     CL_SAFE_CALL(clEnqueueReadBuffer(cq,src.cbegin(),block,src_offset,n,
BUILDSTDERR:       |                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:155:18: note: '*((void*)& err_flag +24)' was declared here
BUILDSTDERR:   155 |   UCL_H_Vec<int> err_flag(1,*(this->ucl_device));
BUILDSTDERR:       |                  ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::LJClass2Long<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:75:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    75 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::LJDSF<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:79:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::CGCMMLong<numtyp, acctyp>::init(int, double**, int**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:76:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    76 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:35,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_kernel.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_kernel.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_texture.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'void LAMMPS_AL::RESquared<numtyp, acctyp>::clear() [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:587:37: warning: '*((void*)& err_flag +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   587 |     CL_SAFE_CALL(clEnqueueReadBuffer(cq,src.cbegin(),block,src_offset,n,
BUILDSTDERR:       |                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:144:18: note: '*((void*)& err_flag +24)' was declared here
BUILDSTDERR:   144 |   UCL_H_Vec<int> err_flag(1,*(this->ucl_device));
BUILDSTDERR:       |                  ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp: In member function 'int LAMMPS_AL::RESquared<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, int**, double**, double**, double**, double**, double**, const double*, int, int, int, int, double, double, FILE*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:105:3: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   105 |   host_write[1]=static_cast<numtyp>(host_special_lj[1]);
BUILDSTDERR:       |   ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::SW<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:75:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    75 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Table<numtyp, acctyp>::init(int, double**, double***, double**, double*, int, int, int, int, double, double, FILE*, int, int, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write_int +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:90:18: note: '*((void*)& host_write_int +24)' was declared here
BUILDSTDERR:    90 |   UCL_H_Vec<int> host_write_int(lj_types*lj_types,*(this->ucl_device),
BUILDSTDERR:       |                  ^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp: In instantiation of 'void LAMMPS_AL::Tersoff<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:331:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:261:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   261 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Tersoff<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:159:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   159 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:83:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    83 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Array.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Array2D.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp: In instantiation of 'void LAMMPS_AL::TersoffMod<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:331:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:261:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   261 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::TersoffMod<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:159:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   159 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:83:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    83 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp: In instantiation of 'void LAMMPS_AL::TersoffZBL<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:357:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:286:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   286 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::TersoffZBL<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double, double, double, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:179:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   179 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:90:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    90 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Vashishta<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:79:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 15%] Linking CXX static library libgpu.a
/usr/bin/cmake -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1
/usr/bin/ar qc libgpu.a  CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/ranlib libgpu.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 15%] Built target gpu
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 15%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp:164:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   164 |         fread(&myVal,sizeof(double),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 17%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 17%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 17%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    91 |     for (int i = 0; i < node.getChildren().size(); i++) {
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   113 |             for (int i = 1; i < args.size(); i++)
BUILDSTDERR:       |                             ~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<double*, double*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   170 |     for (int i = 0; i < variablesToCopy.size(); i++)
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::Operation*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   175 |     for (int step = 0; step < operation.size(); step++) {
BUILDSTDERR:       |                        ~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   180 |             for (int i = 0; i < args.size(); i++)
BUILDSTDERR:       |                             ~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    40 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    47 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    53 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    58 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:181:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   181 |             if (pos != tokens.size())
BUILDSTDERR:       |                 ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:190:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   190 |         if (pos != tokens.size())
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::__cxx11::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:201:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   201 |     if (pos == tokens.size())
BUILDSTDERR:       |         ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:227:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   227 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:241:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   241 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Linking CXX static library libcolvars.a
/usr/bin/cmake -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc libcolvars.a  CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/ranlib libcolvars.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Built target colvars
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseVector.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.h:11,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.h:11,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Linking CXX static library libatc.a
/usr/bin/cmake -P CMakeFiles/atc.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1
/usr/bin/ar qc libatc.a  CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/ranlib libatc.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Built target atc
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/lammps.dir/DependInfo.cmake --color=
Scanning dependencies of target lammps
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp:132:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   132 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:337:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:346:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp:979:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   979 |       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp:130:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   130 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:338:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:347:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:350:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp:714:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   714 |   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
BUILDSTDERR:       |                            ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp:312:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |   int x0;
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp:1449:16: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1449 |   int index=-1,dir;
BUILDSTDERR:       |                ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp:818:34: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   818 |         for (i = atom->nlocal; i < nlast; i++) {
BUILDSTDERR:       |                                ~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |           ptr[n] = 180.0*theta/MY_PI;
BUILDSTDERR:       |                    ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:308:60: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |           ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:400:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             ptr[n] = engrot;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:397:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |             ptr[n] = engvib;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:403:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   403 |             ptr[n] = engtrans;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:391:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |             ptr[n] = engpot;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:231:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   231 |   double inertia,omegasq;
BUILDSTDERR:       |                  ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:409:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ptr[n] = vvib;
BUILDSTDERR:       |             ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:412:62: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |             ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |         btype = onemols[imol]->bond_type[iatom][i];
BUILDSTDERR:       |                                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |         btype = onemols[imol]->bond_type[iatom][i];
BUILDSTDERR:       |                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1512 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1513 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1512 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1586:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1586 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1587:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1587 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1586:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1586 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1691:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1691 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1692:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1692 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1691:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1691 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:416:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |         if (minflag[idim] == COORD) minvalue[idim] *= scale;
BUILDSTDERR:       |                                     ~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp:320:60: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |           ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp:244:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp:513:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   513 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
BUILDSTDERR:       |                           ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp:444:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   444 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
BUILDSTDERR:       |                           ~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   218 |           cbuf[n] = 180.0*acos(c)/MY_PI;
BUILDSTDERR:       |                 ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp:197:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   198 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
BUILDSTDERR:       |                 ~~~~~~~~~                     
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:668:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
BUILDSTDERR:       |                                                ~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:668:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
BUILDSTDERR:       |                        ~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   229 |     ranmol = new RanMars(lmp,molseed+comm->me);
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:119:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   119 |     if (strcmp(arg[iarg],"basis") == 0) {
BUILDSTDERR:       |                        ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   129 |   } else if (style == SANGLE) {
BUILDSTDERR:       |          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:322:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:331:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:334:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:516:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   516 |     atom->v = vhold;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:515:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   515 |     atom->x = xhold;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:517:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     atom->image = imagehold;
BUILDSTDERR:       |     ~~~~~~~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:855:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:855:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:756:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:756:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                         ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1033:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1033 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1027:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1027 |             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
BUILDSTDERR:       |                                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
BUILDSTDERR:       |                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:893:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   893 |           image->draw_sphere(bodyarray[k],color,bodyarray[k][3]);
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1033:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1033 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:1032:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |                 (*ptr != 0.0 && value != 0.0))
BUILDSTDERR:       |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:529:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |     double *values;
BUILDSTDERR:       |             ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:528:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |     double *ptr,*ptrhold;
BUILDSTDERR:       |                  ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp:777:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   777 |     tmp = MAX(nneigh,nneighfull);
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp:777:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp:537:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   537 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp:482:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   482 |     values[lastindex][i] = scalar;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp:499:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp:1057:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1057 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp:854:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp:299:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   299 |   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:700:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:911:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   911 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:968:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |         else if (lengthone != length)
BUILDSTDERR:       |              ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   629 |     else vector[i] += scalar;
BUILDSTDERR:       |          ~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |         if (value == -1)
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp:151:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   151 |         set[index].style = FINAL;
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:844:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   844 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:814:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   814 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:784:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   784 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::post_neighbor()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_onesided()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_no_newton()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_newton()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual int LAMMPS_NS::FixNeighHistory::unpack_exchange(int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::FixNeighHistory::allocate_pages()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::unpack_restart(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   566 |   df1 = df1*cos_target[m] - ddf1*sin_target[m];
BUILDSTDERR:       |                             ~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   457 |       if (imageflag)
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |     extarray = finalvalue;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |     else if (value != finalvalue)
BUILDSTDERR:       |          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp:65:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    65 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp:56:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    56 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp:518:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   518 |           bool xin = ((surface[0]+tdir[0]) >= -radius) &&
BUILDSTDERR:       |                       ~~~~~~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:739:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   739 |   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:751:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   751 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:755:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   755 |       if (me == 0) fread(names[i],sizeof(char),n,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:319:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:328:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:331:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:7: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:33: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |                      ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:20: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |         ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   271 |   p[3] = c_phi*p[3] + s_phi*kp[3];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |   p[2] = c_phi*p[2] + s_phi*kp[2];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |   p[1] = c_phi*p[1] + s_phi*kp[1];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |   p[0] = c_phi*p[0] + s_phi*kp[0];
BUILDSTDERR:       |                       ~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp:14:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::NeighList::setup_pages(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1675 |     if (newtflag) {
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1783 |     if (newtflag) {
BUILDSTDERR:       |     ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   103 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBinAtomonly::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   109 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   110 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   110 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   111 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   105 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    89 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   103 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinAtomonlyNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   107 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   108 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   116 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   147 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   105 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   106 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    90 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:99:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    99 |         if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                              ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    91 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:149:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   131 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   132 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:149:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    72 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:195:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   177 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   178 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:150:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    71 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    72 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   129 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   130 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    76 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1363 |   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1380:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1380 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1383:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1383 |     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1386:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1386 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1389:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1389 |     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1392:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1392 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1395:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1395 |     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1405:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1405 |   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1422:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1422 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1425:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1425 |     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1428:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1428 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1431:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1431 |     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1434:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1434 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:165:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   149 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:165:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    78 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   117 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    79 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalffullNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalffullNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkip::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:153:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   153 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    64 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSize::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2on::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2onOneside::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:281:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:285:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   285 |           fread(&AA[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |           fread(&BB[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&aa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&beta[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:321:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:1678:17: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1678 |       e = single(0,1,itype,jtype,rsq,1.0,1.0,f);
BUILDSTDERR:       |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:1688:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1688 |   if (atom->q) atom->q = q_hold;
BUILDSTDERR:       |                ~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:389:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |         ftable[i] = qqrd2e/r * fgamma;
BUILDSTDERR:       |                     ~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:390:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |         etable[i] = qqrd2e/r * egamma;
BUILDSTDERR:       |                     ~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:39: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
BUILDSTDERR:       |                                ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:39: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
BUILDSTDERR:       |                                         ~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:333:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:337:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:338:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:339:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   339 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:340:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:341:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:342:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   342 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:373:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:374:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:376:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:365:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:369:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   369 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:374:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:410:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:488:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   488 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:489:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   488 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   489 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:483:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   483 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:484:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   484 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:483:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   483 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:167:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:163:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   163 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:164:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:168:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:163:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   163 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:364:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:368:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   368 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:369:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   369 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:486:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   486 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:487:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   486 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   487 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:481:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:482:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   482 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:481:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:170:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:167:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:171:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:311:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:317:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:318:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:348:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:349:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:350:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:248:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   248 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:251:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:275:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   275 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:276:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   276 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:277:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:367:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:374:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:375:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:410:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:468:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:468:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:147:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:152:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   152 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:153:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   153 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:154:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   154 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:155:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   155 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:256:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   256 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:281:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:253:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:277:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:278:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   278 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:318:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:323:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:324:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:355:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:233:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   233 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:237:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:238:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   238 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:266:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   266 |     fread(&t_start,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:267:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   267 |     fread(&t_stop,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:268:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   268 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:269:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   269 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:270:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   270 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:284:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&b[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:317:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:318:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    47 |   int multflag;
BUILDSTDERR:       |       ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:610:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   610 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:614:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:615:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   615 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:616:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   616 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:645:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   645 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:646:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   646 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:647:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   647 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:648:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   648 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:392:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |             fpair = factor_lj*forcelj*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:395:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   395 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   396 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:674:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   674 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:697:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   697 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:700:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:706:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   706 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:710:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   710 |       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:713:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   713 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:717:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   717 |       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   399 |   int multflag;
BUILDSTDERR:       |       ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:316:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:348:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   348 |       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:345:46: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:133:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:130:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:173:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   173 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:174:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:175:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:176:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   176 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:177:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   177 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:215:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   215 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   216 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:211:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:109:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:112:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:356:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:361:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:362:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:363:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:394:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   394 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:396:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:452:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   453 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:139:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   139 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:604:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   604 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:608:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   608 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:609:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:610:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   610 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:639:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   639 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:640:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   640 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:641:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   641 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:642:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   642 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:386:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             fpair = factor_lj*forcelj*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:389:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   390 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:379:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:383:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:465:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   465 |     eng += phicoul;
BUILDSTDERR:       |     ~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:464:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:464:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:458:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   458 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   459 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:167:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   162 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:167:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:375:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:379:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:380:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:381:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:412:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:413:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   413 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:414:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   414 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:171:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:164:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   165 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:327:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:331:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:332:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:333:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |           fread(&shift[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:334:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:364:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:365:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:366:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:344:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:348:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:349:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:350:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:351:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:381:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:382:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:383:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:438:44: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:140:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:382:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&cut_coul_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:421:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   421 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:503:30: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   503 |         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:500:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |     philj += ljsw5[itype][jtype];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:492:29: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         tc*tc*tc * (coulsw3 + coulsw4*tc);
BUILDSTDERR:       |                    ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:159:49: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
BUILDSTDERR:       |                                        ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:169:38: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:166:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:165:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                                              ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:355:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:359:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   359 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:361:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:362:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:394:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   394 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:453:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   453 |       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:451:33: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   451 |     philj = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:448:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   448 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   449 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:143:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:141:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   141 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:138:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                              lj4[itype][jtype]) - offset[itype][jtype];
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:286:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:291:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   291 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:292:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   292 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:268:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   268 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:272:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   272 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:273:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   273 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:274:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   274 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:275:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   275 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:303:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   303 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:304:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:305:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   305 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:631:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   631 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:635:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   635 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:636:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   636 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:637:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   637 |           fread(&gamR[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:638:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   638 |           fread(&gamA[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:639:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   639 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:670:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   670 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:671:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   671 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:672:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   672 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:673:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   673 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   394 |             fpair = factor_mie*forcemie*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   398 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:249:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:253:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |           fread(&prefactor[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:254:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   254 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:289:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:293:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   293 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:294:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   294 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:295:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   295 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:324:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:255:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   255 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:259:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   259 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:260:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   260 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:287:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:288:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:289:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:290:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:978:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   978 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:979:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   979 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:980:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   980 |     fread(&ewaldflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:981:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   981 |     fread(&pppmflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:982:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   982 |     fread(&msmflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:983:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |     fread(&dispersionflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:984:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |     fread(&tip4pflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1043:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1043 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
BUILDSTDERR:       |                                   ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1043:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1043 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
BUILDSTDERR:       |        ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1040:9: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1040 |     phi = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |     ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp:141:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   141 |               (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp:289:26: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   289 |       (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:175:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:179:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   179 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:204:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   204 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:205:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   205 |     fread(&coeffflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:687:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   687 |   vec[5] = kme + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:686:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   686 |   vec[4] = jme + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:685:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   685 |   vec[3] = ime + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:881:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   881 |   return index;
BUILDSTDERR:       |          ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:559:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   559 |       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:487:18: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   487 |     else lo[dim] = valuehalf;
BUILDSTDERR:       |          ~~~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:1051:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1051 |       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:307:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |       fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:311:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       fread(&procsperfile,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:314:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |         fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:318:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |         fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:324:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |         fread(buf,sizeof(double),n,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:384:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |       fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:387:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |       fread(&procsperfile,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:396:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |         fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:400:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |         fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:406:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |         fread(buf,sizeof(double),n,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1106:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1106 |           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1288:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1288 |   if (me == 0) fread(value,sizeof(char),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1300:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1300 |   if (me == 0) fread(vec,sizeof(int),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1311:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1311 |   if (me == 0) fread(vec,sizeof(double),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:191:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |       contact[i].delz = xorig[2] - zs;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:190:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |       contact[i].dely = xorig[1] - ys;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:189:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |       contact[i].delx = xorig[0] - xs;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   335 |   add_contact(0,x,xp,yp,zp);
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   717 |     add_contact(0,x,xp,yp,zp);
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp:173:35: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |     if (stopflag) update->endstep = stop;
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp:171:38: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |     if (startflag) update->beginstep = start;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~~~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp:1152:19: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1152 |           quat[1] = 0.0;
BUILDSTDERR:       |           ~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp:149:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |   MPI_Comm_split(uorig,0,key,&uworld);
BUILDSTDERR:       |   ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:547:48: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |       if (vfield) input->variable->compute_atom(zvar,igroup,&vfield[0][2],3,0);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:540:61: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |     if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:535:61: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |     if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:527:31: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   527 |           if (zstyle) v[i][2] += vz;
BUILDSTDERR:       |                       ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:526:31: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   526 |           if (ystyle) v[i][1] += vy;
BUILDSTDERR:       |                       ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:521:31: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   521 |           if (xstyle) v[i][0] = vx;
BUILDSTDERR:       |                       ~~~~~~~~^~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:34:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h:173:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |     sfree(array);
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:169:12: note: 'vhold' was declared here
BUILDSTDERR:   169 |   double **vhold;
BUILDSTDERR:       |            ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:684:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   684 |       fscanf(fp,"%d",&nextindex);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3929:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3929 |     newtree->value = value;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4703:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4703 |   int op,opprevious,flag1,flag2;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4193:30: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4193 |     if (method == AVE) value /= nvec;
BUILDSTDERR:       |                        ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4007:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4007 |     int index,nvec,nstride;
BUILDSTDERR:       |                    ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:1185:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1185 |   int op,opprevious;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:1007:53: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1007 |         if (mask[i] & groupbit) result[m] = vstore[i];
BUILDSTDERR:       |                                             ~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3487:38: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3487 |       argstack[nargstack++] = value1 + value2*randomequal->gaussian();
BUILDSTDERR:       |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3382:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3382 |       argstack[nargstack++] = sqrt(value1);
BUILDSTDERR:       |                               ~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   139 |         inertia[0] = tbonus[tri[i]].inertia[0];
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |         length = lbonus[line[i]].length;
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    94 |       shape = bonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                 ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp:306:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   306 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   307 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:466:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:469:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:473:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:477:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:478:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:479:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:511:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   511 |     fread(&gamma,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&upsilon,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:515:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:516:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   516 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:729:30: warning: '*((void*)& dchi2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   729 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:728:30: warning: '*((void*)& dchi2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   728 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:727:30: warning: 'dchi2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   727 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:729:45: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   729 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:728:45: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   728 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:727:45: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   727 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:444:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:447:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:451:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   451 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:455:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   455 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:456:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   456 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:457:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:485:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   485 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:486:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   486 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp:380:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   381 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |   int nedges,nentries;
BUILDSTDERR:       |       ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp:340:26: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   340 |       vertex_against_wall(i, wall_pos, x, f, torque, side,
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   341 |                           contact_list, num_contacts, facc);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp:303:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   303 |         if (delr > eradi) dz = cylradius;
BUILDSTDERR:       |         ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp:899:6: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without
BUILDSTDERR:   899 | void LAMMPS::init_pkg_lists()
BUILDSTDERR:       |      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp:335:28: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   335 |         sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque);
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp:326:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   327 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:186:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   186 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:187:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:188:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   188 |     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:189:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:376:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:377:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:378:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:380:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:381:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:382:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:385:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:245:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   245 |       int interact, num_contacts, done;
BUILDSTDERR:       |           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                                   ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:602:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   602 |   double eradi,eradj,rradi,rradj;
BUILDSTDERR:       |          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:602:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   602 |   double eradi,eradj,rradi,rradj;
BUILDSTDERR:       |                ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:604:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   604 |   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
BUILDSTDERR:       |                                ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:604:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   604 |   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
BUILDSTDERR:       |                                      ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:707:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   707 |   int ni, npi, ifirst, nei, iefirst;
BUILDSTDERR:       |                        ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:707:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   707 |   int ni, npi, ifirst, nei, iefirst;
BUILDSTDERR:       |                             ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:708:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   708 |   int nj, npj, jfirst, nej, jefirst;
BUILDSTDERR:       |           ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:709:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   709 |   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
BUILDSTDERR:       |                                ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   107 |   int nei,nej,iefirst,jefirst;
BUILDSTDERR:       |               ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:107:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   107 |   int nei,nej,iefirst,jefirst;
BUILDSTDERR:       |       ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |   int ni,nj,npi,npj,ifirst,jfirst;
BUILDSTDERR:       |                     ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:213:15: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |       if (npi == 1 && npj == 1) {
BUILDSTDERR:       |           ~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:277:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   277 |       int interact, num_contacts;
BUILDSTDERR:       |           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:2347:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2347 |   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
BUILDSTDERR:       |                      ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:2347:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2347 |   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
BUILDSTDERR:       |                            ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:221:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   221 |       if (r > eradi + eradj + cut_inner) continue;
BUILDSTDERR:       |               ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                                           ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                                   ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                     ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:269:14: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |       } else if (npi == 1) {
BUILDSTDERR:       |              ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:608:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   608 |     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:609:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:611:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   611 |     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:612:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   612 |     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:613:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   613 |     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:614:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:615:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   615 |     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:616:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   616 |     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:821:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   821 |       ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   822 |                fabcd[0],fabcd[2],fabcd[3],
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   823 |                delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   824 |                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:310:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   310 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:348:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:841:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:842:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:843:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:844:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:846:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:847:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:848:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:849:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:851:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   851 |     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:852:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   852 |     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:853:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:854:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:856:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   856 |     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:857:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   857 |     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:858:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   858 |     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:859:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   859 |     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:861:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   861 |     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:862:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   862 |     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:863:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   863 |     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:864:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   864 |     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/buimake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: ld/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:866:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   866 |     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:867:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:868:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:869:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:871:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:875:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   875 |     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:876:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   876 |     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:877:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   877 |     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:366:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:464:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   465 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:464:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   145 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:406:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:410:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:411:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   411 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:412:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:445:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:538:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   539 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:538:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:531:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:534:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   534 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:176:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   185 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:178:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:609:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:613:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   613 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:614:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:649:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   649 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:650:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   650 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:651:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   651 |     fread(&flagfld,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:652:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   652 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:653:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   653 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:654:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   654 |     fread(&t_target, sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:655:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   655 |     fread(&seed, sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:656:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   656 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:657:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   657 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:658:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   658 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:659:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   659 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:308:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |           Fbmag = prethermostat*sqrt(a_pu);
BUILDSTDERR:       |                                 ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:96:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    96 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                     ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp:82:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp:82:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                     ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:400:31: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:404:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |           fread(&a12[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:438:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:439:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   439 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:440:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:543:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |   return factor_lj*phi;
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:194:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   194 |       f[i][2] += delz*fpair;
BUILDSTDERR:       |                  ~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:689:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   689 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:693:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   693 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:694:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   694 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:727:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:728:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   728 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:729:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   729 |     fread(&flagfld,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:730:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   730 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:731:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   731 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:732:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   732 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:733:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:734:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:735:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1916:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1916 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1920:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1920 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1921:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1921 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1953:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1953 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1954:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1954 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1955:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1955 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1956:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1956 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1957:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1957 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1958:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1958 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1959:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1959 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1960:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1960 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:143:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:148:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:143:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:188:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:180:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:185:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:182:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:149:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:146:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:150:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:168:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:168:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:170:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:170:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:186:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:178:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:186:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:180:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:180:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:517:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:543:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:543:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:188:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:192:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   192 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   193 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:185:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   245 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                                     ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:301:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   302 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |           fread(&epsilon_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |           fread(&sigma_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   357 |           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:680:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   680 |   int ninserted_mols = ninserted_atoms / natom;
BUILDSTDERR:       |       ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:696:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   696 |       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:654:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   654 |           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:503:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   503 |         coords[0][3] = radtmp;
BUILDSTDERR:       |         ~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:14: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |                             ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:27: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |                ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1174:25: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1174 |   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
BUILDSTDERR:       |   ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1201:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1201 |     F_pulloff = 3*M_PI*coh*Reff;
BUILDSTDERR:       |                 ~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:546:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&kn,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   573 |     fread(&kt,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   574 |     fread(&gamman,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:575:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   575 |     fread(&gammat,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:576:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   576 |     fread(&xmu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:577:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   577 |     fread(&dampflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |               ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1254:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1254 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1258:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1258 |           fread(&normal_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1259:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1259 |           fread(&damping_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1260:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1260 |           fread(&tangential_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1261:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1261 |           fread(&roll_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1262:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1262 |           fread(&twist_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1263:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1263 |           fread(&normal_coeffs[i][j],sizeof(double),4,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1264:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1264 |           fread(&tangential_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1265:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1265 |           fread(&roll_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1266:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1266 |           fread(&twist_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1267:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1267 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1645:14: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1645 |   svector[8] = magtortwist;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1643:14: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1643 |   svector[6] = fr3;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1642:14: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1642 |   svector[5] = fr2;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1641:14: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1641 |   svector[4] = fr1;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1644:14: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1644 |   svector[7] = fr;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:14: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                             ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:27: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1327:11: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1327 |   double *history,*allhistory;
BUILDSTDERR:       |           ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1462:25: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1462 |   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
BUILDSTDERR:       |   ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1427:13: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1427 |     t0 = coh*coh*R2*R2*E;
BUILDSTDERR:       |          ~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1427:20: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1427 |     t0 = coh*coh*R2*R2*E;
BUILDSTDERR:       |          ~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:385:19: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |           history = &allhistory[size_history*jj];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:440:24: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             history[1] += vtr2*dt;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:312:21: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |           touch[jj] = 1;
BUILDSTDERR:       |           ~~~~~~~~~~^~~
/buildmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: dir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |           F_pulloff = 3*MY_PI*coh*Reff;
BUILDSTDERR:       |                       ~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:20: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |           ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:42: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                                   ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:33: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                      ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:356:31: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:229:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   229 |       allhistory = firsthistory[i];
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:228:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   228 |       touch = firsttouch[i];
BUILDSTDERR:       |                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:918:36: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   918 |           FOURTHIRDS*mix_stiffnessE(Emod[i][j],Emod[i][j],
BUILDSTDERR:       |                      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   919 |                                     poiss[i][j],poiss[i][j]);
BUILDSTDERR:       |                                     ~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:913:30: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   913 |       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:924:32: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:933:36: warning: 'tangential_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   933 |         tangential_coeffs[i][j][0] = tangential_coeffs[j][i][0] =
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   934 |           tangential_coeffs_one[0];
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~~  
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:915:20: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   915 |         Emod[i][j] = Emod[j][i] = normal_coeffs_one[0];
BUILDSTDERR:       |         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:937:36: warning: 'tangential_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   937 |         tangential_coeffs[i][j][k] = tangential_coeffs[j][i][k] =
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   938 |           tangential_coeffs_one[k];
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~~  
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:937:36: warning: 'tangential_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1214:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1214 |   return cutoff;
BUILDSTDERR:       |          ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp: In member function 'virtual void LAMMPS_NS::FixTuneKspace::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:158:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   158 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:163:33: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   163 |       sprintf(new_pair_style,"%s/msm",base_pair_style);
BUILDSTDERR:       |                                 ^~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 24 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:148:31: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   148 |     sprintf(new_pair_style,"%s/msm",base_pair_style);
BUILDSTDERR:       |                               ^~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 24 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:141:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   141 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:134:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   134 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:247:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   247 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:247:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   247 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   248 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:243:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   243 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:242:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:188:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:185:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:184:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:426:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:430:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:431:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:432:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:433:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   433 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:434:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   434 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:435:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:469:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:470:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:471:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   471 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:472:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:567:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:567:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   568 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   560 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:560:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   560 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:563:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   563 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:190:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                    make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR:                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:191:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:242:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:242:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:238:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:237:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:184:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:181:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:180:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:403:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:409:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:410:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:445:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:538:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:538:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:531:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:534:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   534 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:183:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:183:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:177:36: warning: 'itable' may be used uninitiamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: lized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:360:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |           fread(&buck_a_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:366:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |           fread(&buck_c_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:367:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&cut_buck_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:404:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:206:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:208:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:208:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:206:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:146:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:146:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:148:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:148:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:296:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   296 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:299:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   299 |         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:376:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:378:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:378:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:376:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:162:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:162:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1642:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1642 |                 v5sum += v5_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1641:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1641 |                 v4sum += v4_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1640:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1640 |                 v3sum += v3_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1639:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1639 |                 v2sum += v2_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1638:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1638 |                 v1sum += v1_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1637:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1637 |                 v0sum += v0_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1997:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |                 v5sum += v5_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1996:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1996 |                 v4sum += v4_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1995:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1995 |                 v3sum += v3_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1994:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1994 |                 v2sum += v2_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1993:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1993 |                 v1sum += v1_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1992:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1992 |                 v0sum += v0_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:522:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   522 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   514 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   514 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:517:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:512:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   512 |       phicoul = prefactor*egamma;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:216:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   216 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:211:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:220:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:213:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:213:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:220:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:386:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:413:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   413 |               forcecoul = prefactor * fgamma;
BUILDSTDERR:       |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:385:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:416:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:416:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   896 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   900 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:901:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   901 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:902:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   902 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:903:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   903 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   935 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   936 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   937 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:938:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   938 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   939 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   940 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   941 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1049:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1049 |       philj6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  1050 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1044:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1044 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1032:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1032:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1035:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1035 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1030:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1030 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:572:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   572 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: fsw_coul_long.cpp:611:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   611 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   611 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   218 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:223:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:239:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               evdwl6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   240 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:220:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:220:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:115:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   115 |   int i,j,ii,jj,inum,jnum,itype,jtype,itable;
BUILDSTDERR:       |                                 ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:828:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   828 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   832 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:833:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   833 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   834 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   835 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   870 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:972:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   972 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:967:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   967 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:962:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   962 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:520:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   520 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:196:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:201:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:205:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:205:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:474:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   474 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   475 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   466 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   466 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:469:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |       phicoul = prefactor*egamma;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:365:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   365 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:388:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   388 |               forcecoul = prefactor * fgamma;
BUILDSTDERR:       |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:364:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   364 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:391:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:391:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:208:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:203:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:212:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   213 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:205:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:536:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   536 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   537 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   538 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   548 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   414 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:416:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:393:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   393 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:389:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:336:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:332:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   332 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:416:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:798:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   798 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   802 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:803:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:804:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   804 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   835 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   836 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:841:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:932:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   932 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   933 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:924:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:924:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:927:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   927 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   922 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:512:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   512 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:538:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:538:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:21: warning: 'erfcmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: ' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:191:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   192 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:360:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |           fread(&epsilon_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:365:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |           fread(&sigma_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:366:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   398 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:478:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:479:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:382:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   382 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:382:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:384:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   384 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:361:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   361 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:357:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   357 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   304 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   300 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:384:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   384 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1547 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1548 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1549 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1550 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1551 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1553 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1554:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1554 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1555 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1556 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1557 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1558 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:979:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   979 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:975:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   975 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:948:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   948 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:944:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   944 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   450 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:452:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:429:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   429 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:425:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   425 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:372:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   372 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:368:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   368 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:452:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:718:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   718 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:714:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   714 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:687:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   687 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:683:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialimake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: zed]
BUILDSTDERR:   683 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1390:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1390 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1386:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1386 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1321:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1321 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1317:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1317 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp:264:9: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   264 |       i = ilist[ii];
BUILDSTDERR:       |       ~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp:263:21: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   263 |     for (ii = 0; ii < inum; ii++) {
BUILDSTDERR:       |                  ~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp:641:24: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   641 |       if (me == 0) grab(fp,filename,file->nr,&file->w2r[i][j][1]);
BUILDSTDERR:       |                    ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:312:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:315:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:340:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:341:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |     fread(&cut_triple,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairComb::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairComb::Short_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3398:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  3398 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3399:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  3399 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairAIREBO::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairAIREBO::REBO_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:1241:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1241 |             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3283:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3283 |   return piRC;
BUILDSTDERR:       |          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:811:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   811 |           fpair = dC*dwij / rij;
BUILDSTDERR:       |                   ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:873:18: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   873 |           f[atomm][0] += fm[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:837:18: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   837 |           f[atomk][0] -= fi[0] + fj[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:326:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:327:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:338:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:350:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:358:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:366:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:375:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |       fgets(s,MAXLIB,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:384:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:391:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |       fgets(s,MAXLIB,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:404:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:422:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   422 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:431:19: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |              fgets(s,MAXLIB,fp);
BUILDSTDERR:       |              ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:446:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:464:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:473:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |               fgets(s,MAXLIB,fp);
BUILDSTDERR:       |               ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:488:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   488 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:506:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:515:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |               fgets(s,MAXLIB,fp);
BUILDSTDERR:       |               ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairComb3::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairComb3::Short_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:2309:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2309 |             {com6+=prefac_ij2*pcrossk*dfc_k;}
BUILDSTDERR:       |              ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:1794:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1794 |      prady  += 1.0 *  btor[2] * bbtor * att_eng;
BUILDSTDERR:       |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:1793:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1793 |      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
BUILDSTDERR:       |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:469:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:470:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:472:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:787:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   787 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:143:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:168:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:192:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   192 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4981:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4981 |     fgets(s,MAXLINE,fp);  // skip first comment line
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4982:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4982 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4987:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4987 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5016:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5016 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5084:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5084 |     fgets(s,MAXLINE,fp);  // skip first comment line
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5086:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5086 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5088:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5088 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5092:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5092 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5097:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5097 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5101:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5101 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5103:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5103 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5105:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5105 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5114:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5114 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5121:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5121 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5125:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5125 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5129:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5129 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5131:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5131 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5135:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5135 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5137:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5137 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5141:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5141 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5143:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5143 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5147:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5147 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5149:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5149 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5153:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5153 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5155:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5155 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5159:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5159 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5161:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5161 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5163:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5163 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5172:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5172 |             fgets(s,MAXLINE,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5179:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5179 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5187:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5187 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5195:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5195 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5203:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5203 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5210:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5210 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5214:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5214 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5231:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5231 |             fgets(s,MAXLINE,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5222:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  5222 |     if(nws==3) {
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4967:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4967 |   int i,j,k,n,m;
BUILDSTDERR:       |             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3752 |               ev_tally_xyz(bt_i,bt_j,nlocal,newton_pair,0.0,0.0,ftmp[0],ftmp[1]
BUILDSTDERR:       |               ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  3753 |                   ,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1775:56: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1775 |                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
BUILDSTDERR:       |                                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
BUILDSTDERR:  1776 |                         *-dis_jk[2]*r_ik*r_ik)/(r_ik*r_ik*r_jk*r_jk);
BUILDSTDERR:       |                         ~~~~~~~~~~~~~~~~~~~~~~          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1500:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1500 |             bt_sg[nb_jk].temp=temp_jk;
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1763:52: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1763:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                                     ~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1764:25: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  1764 |                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
BUILDSTDERR:       |                         ^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3489:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3489 |               else if(temp_kk==temp_ji&&setting==0) {
BUILDSTDERR:       |                       ~~~~~~~^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp:387:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   387 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:143:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:168:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:194:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   194 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:970:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   970 |           fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:974:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   974 |           fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp: In member function 'void LAMMPS_NS::PairEIM::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:500:22: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |       if (!grabsingle(fptr,i))
BUILDSTDERR:       |            ~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:987:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:993:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:994:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   994 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:995:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:996:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:997:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:998:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:999:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1000:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1001:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1002:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1003:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1004:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1005:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1006:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1007:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1008:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1009:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1010:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1011:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1011 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1012:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1013:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1014:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1015:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1016:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1017:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1017 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1018:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1019:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1020:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1023:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1023 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1032:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fgets(s,MAXLINE,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1039:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1039 |         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
BUILDSTDERR:       |                     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1046:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1046 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1052:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1052 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairLCBOP::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairLCBOP::SR_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:579:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   579 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:580:43: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   580 |     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                      ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:596:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   596 |       fgets(line,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:614:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:650:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   650 |       fgets(line,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:881:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   881 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:199:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |         if (emb > epsilon) {
BUILDSTDERR:       |         ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   290 |         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   629 |   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   607 |   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   202 |   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   618 |   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:596:44: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   596 |   for (iangle = 0; iangle < num_angle[iprev]; iangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   202 |   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:420:24: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   420 |               angle_eng(jnextangletype,j,jnext,jlast);
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:419:24: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |               angle_eng(jangletype,jprev,j,jnext) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:418:24: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |               angle_eng(inextangletype,i,inext,ilast) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:417:24: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   417 |               angle_eng(iangletype,iprev,i,inext) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:201:9: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |   int i,j,ii,jj,m,inum,jnum;
BUILDSTDERR:       |         ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp: In member function 'virtual void LAMMPS_NS::FixTFMC::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp:255:15: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   255 |     group->xcm(igroup,masstotal,cm);
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp:47:63: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    47 |     lmp->cslib = new CSlib(clientserver-1,arg[2],arg[3],&world);
BUILDSTDERR:       |                                                               ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    43 |   if (protocol == MD) {
BUILDSTDERR:       |   ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:350:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:354:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:355:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:383:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&max_cell_size,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:385:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:116:19: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |           x[m][2] = xold[2];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:115:19: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   115 |           x[m][1] = xold[1];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:114:19: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |           x[m][0] = xold[0];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:15:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.h:299:48: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   299 |     if (map_style == 1) return map_array[global];
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
BUILDSTDERR:    42 |   tagint atomid;
BUILDSTDERR:       |          ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp:2297:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2297 |           if (imolecule == molecule[j]) continue;
BUILDSTDERR:       |           ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:559:15: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   559 |   while (size >= num && num_of_bits < 32) {
BUILDSTDERR:       |          ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:600:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:   600 |   while (bytes[num_of_bytes] >= num) {
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:654:19: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   654 |   if (num_of_bits >= num_of_bytes * 8) {
BUILDSTDERR:       |       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:655:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   655 |     for (i = 0; i < num_of_bytes; i++) {
BUILDSTDERR:       |                 ~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:660:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   660 |     for (i = 0; i < num_of_bytes-1; i++) {
BUILDSTDERR:       |                 ~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:695:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:   695 |     if (lastbits < num_of_bits) {
BUILDSTDERR:       |         ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:935:21: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
BUILDSTDERR:   935 |     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
BUILDSTDERR:       |                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:46:25: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:    46 | #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
BUILDSTDERR:       |                     ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
BUILDSTDERR:   939 |     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
BUILDSTDERR:       |              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:46:25: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:    46 | #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
BUILDSTDERR:       |                     ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
BUILDSTDERR:  1115 |     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
BUILDSTDERR:       |              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1141:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1141 |         thiscoord[2] = receivebits(buf, bitsizeint[2]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1140:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1140 |         thiscoord[1] = receivebits(buf, bitsizeint[1]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1139:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1139 |         thiscoord[0] = receivebits(buf, bitsizeint[0]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:950:28: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   950 |           abs(thiscoord[0] - prevcoord[0]) < larger &&
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:951:28: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   951 |           abs(thiscoord[1] - prevcoord[1]) < larger &&
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:952:28: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   952 |           abs(thiscoord[2] - prevcoord[2]) < larger) {
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   324 |         } else if (me == proc && i == iatom) {
BUILDSTDERR:       |                    ~~~~~~~~~~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp:589:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   589 |       atom->nbonds += onemols[imol]->nbonds;
BUILDSTDERR:       |                                   ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:322:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:326:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:327:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:328:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:329:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:330:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:360:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:361:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:362:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:373:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:382:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   414 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:478:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   478 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
BUILDSTDERR:       |                                           ~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:150:65: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~~~~~       
BUILDSTDERR:   150 |                                         r0n[itype][jtype]*rninv -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   151 |                                         nn[itype][jtype] *
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~       
BUILDSTDERR:   152 |                                         r0m[itype][jtype]*rminv) -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~~~~~~~ 
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:152:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   151 |                                         nn[itype][jtype] *
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   152 |                                         r0m[itype][jtype]*rminv) -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:420:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:424:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:425:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:426:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:466:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:467:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   467 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:553:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   553 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:553:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   553 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:556:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:551:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   551 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:563:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   563 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
BUILDSTDERR:       |                                           ~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:186:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:191:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:196:57: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   197 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:188:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
   make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR:    |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:248:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   248 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:249:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:250:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   250 |     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:251:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp:196:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   196 |   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:249:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:250:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   250 |     fread(&b[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:251:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp:218:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp:218:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp:292:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   292 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp:293:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   293 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:220:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   220 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:221:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   221 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:222:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   222 |     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:228:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:229:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:230:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:231:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   231 |     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:232:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   232 |     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:175:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:176:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   176 |     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:177:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   177 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:170:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   170 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:281:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:284:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:430:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:432:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |     fread(&weightflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   471 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&weightflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:338:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:339:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   339 |     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:340:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:208:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |       pd = -pd;
BUILDSTDERR:       |       ~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:207:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |       p = 2.0 - p;
BUILDSTDERR:       |       ~~^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:321:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:374:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   374 |         if (donor_flag == 0) type2param[i][j][k] = nparams;
BUILDSTDERR:       |         ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:301:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |         if (donor_flag == 0) type2param[i][j][k] = nparams;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:378:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   439 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   441 |     fread(&cut_coul_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:501:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   501 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:167:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:200:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   200 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:133:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:133:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:436:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   436 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   441 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:533:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   533 |       philj6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   534 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:528:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:195:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |               evdwl6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   196 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:99:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    99 |   int i,j,ii,jj,inum,jnum,itype,jtype;
BUILDSTDERR:       |                                 ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:479:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:506:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:507:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   507 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:508:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   508 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:509:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   509 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:510:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:321:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   321 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:317:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:264:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   264 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:260:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   620 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   624 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   625 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   626 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   662 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   663 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   665 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   666 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   668 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   669 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   670 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   671 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   672 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:361:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   361 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:357:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   357 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   304 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   300 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp:116:52: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |     if (mask[i] & groupbit) dilatation[i] = theta[i];
BUILDSTDERR:       |                                             ~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:501:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:502:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   502 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:423:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&kspring[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:429:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:430:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:569:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:573:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   573 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:574:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   574 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:575:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   575 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:576:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   576 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:577:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   577 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:578:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   578 |           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:551:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   551 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:555:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   555 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:556:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   556 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:557:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   557 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:558:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   558 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:559:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   559 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:560:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   560 |           fread(&m_lambdai[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:561:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   561 |           fread(&m_taubi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp:490:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   490 |   return m;
BUILDSTDERR:       |          ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp:967:33: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   967 |     if (me == 0) nlen = readline(fp,&line,&maxline);
BUILDSTDERR:       |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:307:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |     fbiasr = fbias / r0max / rmax;
BUILDSTDERR:       |              ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:307:12: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |     fbiasr = fbias / r0max / rmax;
BUILDSTDERR:       |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:326:29: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |   outvec[4] = atom->tag[jmax];
BUILDSTDERR:       |                             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:325:29: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   325 |   outvec[3] = atom->tag[imax];
BUILDSTDERR:       |                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   616 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
BUILDSTDERR:       |                                  ~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   616 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
BUILDSTDERR:       |                                                        ~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp:480:19: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   480 |     maxhalf[iold] = ijhalf;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixHyperLocal::unpack_reverse_comm(int, int*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In constructor 'LAMMPS_NS::FixHyperLocal::FixHyperLocal(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixHyperLocal::build_bond_list(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |      fshake = ((FixShake*) modify->fix[id_shake]);
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:397:23: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |         tflag[m-1][2] = zflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:390:60: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |       if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
BUILDSTDERR:       |                                                      ~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:390:44: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |       if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
BUILDSTDERR:       |                                      ~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   359 |       if (domain->dimension == 2 && zflag == 1.0)
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:365:23: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   365 |         fflag[m-1][1] = yflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:364:23: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   364 |         fflag[m-1][0] = xflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:342:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   342 |     if (strcmp(arg[iarg],"force") == 0) {
BUILDSTDERR:       |                        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |     if (custom_flag) delete [] molecule;
BUILDSTDERR:       |                                ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1483:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1483 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1478:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1478 |         lbonus[line[i]].theta = theta;
BUILDSTDERR:       |                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1462:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1462 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1406:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1406 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1405:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1405 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1405:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1405 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1628:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1628 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1615:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1615 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1577:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1577 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1576:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1576 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1576:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1576 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2224:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2224 |           radone = lbonus[line[i]].length;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2297:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2297 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2123:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2123 |     if (infile && inbody[ibody]) continue;
BUILDSTDERR:       |                   ~~~~~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2104:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2104 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2021:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2021 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2086:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2086 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp: In member function 'virtual void LAMMPS_NS::FixWallPiston::post_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp:289:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   289 |       if (zloflag && x[i][2] < zlo - roughoff) {
BUILDSTDERR:       |                                ~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2561:60: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 93 [-Wformat-truncation=]
BUILDSTDERR:  2561 |       snprintf(str,128,"Cannot open fix rigid restart file %s",outfile);
BUILDSTDERR:       |                                                            ^~  ~~~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:15:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 36 and 163 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2659:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2659 |   if (me == 0) fclose(fp);
BUILDSTDERR:       |                ~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1394 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1389 |         lbonus[line[i]].theta = theta;
BUILDSTDERR:       |                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1374 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1532 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1519 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   515 |   if (langflag) random = new RanMars(lmp,seed + comm->me);
BUILDSTDERR:       |                                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2380 |           radone = lbonus[line[i]].length;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2466:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2466 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2264:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2264 |     if (infile && inbody[ibody]) continue;
BUILDSTDERR:       |                   ~~~~~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2242 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2157 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2224 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:539:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:543:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |           fread(&DM[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:544:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |           fread(&v_dmx[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:545:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |           fread(&v_dmy[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:546:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |           fread(&v_dmz[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:547:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:548:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   548 |           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:549:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   549 |           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:550:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   550 |           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:584:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   584 |     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:585:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   585 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:586:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   586 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:523:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   523 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:527:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |           fread(&ME[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:528:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |           fread(&v_mex[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&v_mey[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&v_mez[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:561:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   561 |     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:562:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   562 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:563:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   563 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:506:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:510:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |           fread(&J1_mag[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:511:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   511 |           fread(&J1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:512:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |           fread(&J2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:513:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |           fread(&J2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:514:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:695:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   695 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:699:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |           fread(&g1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:700:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |           fread(&g1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:701:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   701 |           fread(&g2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:702:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   702 |           fread(&g2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:703:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   703 |           fread(&q1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:704:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |           fread(&q1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:705:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   705 |           fread(&q2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:706:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   706 |           fread(&q2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:707:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   707 |           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:741:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   741 |     fread(&cut_spin_neel_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:742:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   742 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:743:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   743 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp:55:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    55 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp: In function '_ZN9LAMMPS_NS8PairSNAP17compute_optimizedEii._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp:477:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   477 |     int ielem;
BUILDSTDERR:       |         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp:521:12: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   521 |     double starttime, endtime;
BUILDSTDERR:       |            ^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |         ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |                   ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:30: warning: unused variable 'value' [-Wunused-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |                              ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:    91 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   108 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
BUILDSTDERR:       |              ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   146 |   PyObject * result = PyEval_CallObject(py_init, NULL);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   164 |   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   182 |   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   200 |   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   219 |   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   237 |   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
BUILDSTDERR:       |              ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2966:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2966 |       c1 = tbonus[tri[i]].c1;
BUILDSTDERR:       |                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2954:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2954 |       length = lbonus[line[i]].length;
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2938:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2938 |       shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3049:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3049 |       inertia = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3036:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3036 |       biglist[k].theta = lbonus[line[i]].theta;
BUILDSTDERR:       |                                        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3024:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3024 |       shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1017:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1017 |       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
BUILDSTDERR:       |                               ~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2549:22: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2549 |   AtomVecTri::Bonus *tbonus;
BUILDSTDERR:       |                      ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2703:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2703 |           double length = lbonus[line[i]].length;
BUILDSTDERR:       |                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2679:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2679 |           double *shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1548:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1548 |       xbcoll[2] = xbcollfirst[2];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1547:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1547 |       xbcoll[1] = xbcollfirst[1];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1544:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1544 |       xscoll[1] = xscollfirst[1];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1545:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1545 |       xscoll[2] = xscollfirst[2];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1546:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1546 |       xbcoll[0] = xbcollfirst[0];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1543:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1543 |       xscoll[0] = xscollfirst[0];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1551:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1551 |       norm[2] = normfirst[2];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1550:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1550 |       norm[1] = normfirst[1];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1549:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1549 |       norm[0] = normfirst[0];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1578:12: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1578 |       else if (type != WALL)
BUILDSTDERR:       |            ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1577:50: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1577 |         force_torque(v[i],vsnew,xscoll,xbcoll,f[j],NULL);
BUILDSTDERR:       |                                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp:410:37: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
BUILDSTDERR:   410 |   else if (format && strlen(format) != ninput+noutput)
BUILDSTDERR:       |                      ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp:320:20: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |     PyTuple_SetItem(pArgs,i,pValue);
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:249:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |   return correction;
BUILDSTDERR:       |          ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:331:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   332 |                 virial[0] + virial[1] + virial[2]) / 3.0 *
BUILDSTDERR:       |                 ~~~~~~~~~                     
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:393:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   393 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:516:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   516 |       for (j=0; j<narea.size(); ++j)
BUILDSTDERR:       |                 ~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:531:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   531 |       if (neighs != narea.size())
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:548:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   548 |         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
BUILDSTDERR:       |                   ~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:592:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   592 |       if (neighs != narea.size())
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:295:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   295 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:296:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   296 |     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:297:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   297 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:371:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   371 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:457:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |           fread(&kappa_dh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:463:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:464:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |           fread(&b_dh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:465:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:466:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:499:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:500:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:501:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   685 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   832 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |           fread(&k_cxst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |           fread(&a_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   850 |           fread(&b_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   851 |           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |           fread(&a_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   855 |           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   856 |           fread(&b_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   857 |           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   859 |           fread(&a_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:860:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   860 |           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   861 |           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   862 |           fread(&b_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   863 |           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   865 |           fread(&a_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   866 |           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |           fread(&b_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   936 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   937 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   938 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:575:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   575 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:717:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   717 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   722 |           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   723 |           fread(&sigma_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   724 |           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   725 |           fread(&b_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   726 |           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   728 |           fread(&sigma_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   729 |           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   730 |           fread(&b_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   731 |           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   732 |           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:733:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |           fread(&sigma_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:734:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:735:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |           fread(&b_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:736:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   736 |           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:779:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   779 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:780:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   780 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:781:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   781 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   831 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&k_cxst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |           fread(&a_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&b_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |           fread(&a_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&b_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |           fread(&a_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_comake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: axstk.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&b_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1024 |           fread(&a_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&b_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1030 |           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1031 |           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1033 |           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1034 |           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1035 |           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1036 |           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1037 |           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1107 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1108 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1109 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:799:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   799 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:978:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   978 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |           fread(&a_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   985 |           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   986 |           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   988 |           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   989 |           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   990 |           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:992:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   992 |           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |           fread(&shift_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |           fread(&a_hb1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&b_hb1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&a_hb2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&b_hb2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: Wunused-result]
BUILDSTDERR:  1005 |           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&a_hb3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&b_hb3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1011 |           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&a_hb4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&b_hb4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1017 |           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&a_hb7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&b_hb7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1023 |           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&a_hb8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&b_hb8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1029:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1029 |           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1104 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1105:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1105 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1106:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1106 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:833:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   833 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:995:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1000:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |           fread(&epsilon_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&a_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&cut_st_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&cut_st_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1005:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1006:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&b_st_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&b_st_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&shift_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1012:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |           fread(&a_st4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&b_st4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1018:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |           fread(&a_st5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&b_st5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 1022 |           freamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: d(&dtheta_st5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1024:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1024 |           fread(&a_st6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&b_st6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1030:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1030 |           fread(&a_st1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1031:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1031 |           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1032:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fread(&b_st1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1033:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1033 |           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1034:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1034 |           fread(&a_st2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1035:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1035 |           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1036:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1036 |           fread(&b_st2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1037:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1037 |           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1103 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1104:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1104 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1105 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   785 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   950 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   955 |           fread(&k_xst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   956 |           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   957 |           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   958 |           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   959 |           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   960 |           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   961 |           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   962 |           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   963 |           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   965 |           fread(&a_xst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   966 |           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   967 |           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   968 |           fread(&b_xst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   969 |           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   971 |           fread(&a_xst2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   972 |           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   973 |           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   974 |           fread(&b_xst2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   975 |           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   977 |           fread(&a_xst3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_resmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: ult [-Wunused-result]
BUILDSTDERR:   978 |           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   979 |           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   980 |           fread(&b_xst3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   981 |           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |           fread(&a_xst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   985 |           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   986 |           fread(&b_xst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   989 |           fread(&a_xst7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   990 |           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   992 |           fread(&b_xst7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |           fread(&a_xst8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&b_xst8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1072 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1073 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1074 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:352:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:356:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |           fread(&A_att[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:357:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   357 |           fread(&B_rep[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:358:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:359:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   359 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&cut_r[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:391:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:457:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:461:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:462:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:463:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |           fread(&power[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:464:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:465:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |           fread(&kappa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:466:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |           fread(&powerT[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:467:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   467 |           fread(&cutT[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:470:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |             fread(&sc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:474:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |             fread(&kc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |           Q[j]    -= ( dQc - dQd + dQr );
BUILDSTDERR:       |                      ~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |           Q[j]    -= ( dQc - dQd + dQr );
BUILDSTDERR:       |                        ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:400:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:404:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&power[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cutcc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:410:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |             fread(&kappa[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:411:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   411 |             fread(&epsilon[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:412:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |             fread(&powercc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:450:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:451:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   451 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&lj_type[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:389:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:390:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:421:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   421 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:422:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   422 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:423:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:478:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |           fread(&lj_type[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:479:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:480:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   480 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:481:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   481 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:515:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:516:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   516 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:517:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   517 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:518:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   518 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:519:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp:148:30: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |           tags = read_section(fp,num);
BUILDSTDERR:       |                  ~~~~~~~~~~~~^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, int, FILE*, FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp:124:7: warning: 'cols' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |       if (j == cols) {
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp:160:18: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |       write_group(fp,i,atom,group,comm->me,comm->nprocs,world,screen,logfile);
BUILDSTDERR:       |       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp:543:33: warning: unused variable 'id' [-Wunused-variable]
BUILDSTDERR:   543 |     std::vector<int>           &id = *(proxy->modify_atom_ids());
BUILDSTDERR:       |                                 ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::invoke_vector(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:434:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
BUILDSTDERR:   434 |         snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
BUILDSTDERR:       |                                                         ^~  ~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:22:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::options(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:561:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
BUILDSTDERR:   561 |           snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
BUILDSTDERR:       |                                                           ^~  ~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:22:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:216:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   216 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:218:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:219:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:225:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   225 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:235:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:237:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:435:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   437 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:438:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:444:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:472:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:474:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:23:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   208 |                                        onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   209 |                                        tag[j]-tagprev);
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:19:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:35:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    35 | #define MAX(A,B) ((A) > (B) ? (A) : (B))
BUILDSTDERR:       |                   ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
BUILDSTDERR:   324 |         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
BUILDSTDERR:       |                        ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:549:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   549 |             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:567:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   567 |             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:583:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   583 |     for (int i = 1; i < nu_bin.size(); ++i)
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:319:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   319 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:381:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:412:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   412 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:482:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   482 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   486 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:487:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   487 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:488:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   488 |           fread(&kappa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:489:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:519:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:520:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   520 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:521:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   521 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:365:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:367:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:368:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   368 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:374:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:387:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:389:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:708:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   708 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:709:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   709 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |         f[i][2] += delz*fpair;
BUILDSTDERR:       |                    ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:189:45: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
BUILDSTDERR:       |                                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   534 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1009 |     mixWtSite2old = fractionOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1014 |     mixWtSite2old = nMoleculesOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1015 |     mixWtSite2 = nMolecules2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |     mixWtSite2 = fraction2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:973:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   973 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:977:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   977 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1003:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1004:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1005:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1006:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1223:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1223 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1237:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1237 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1216:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1216 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1230:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1230 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1223:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1223 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1237:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1237 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1216:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1216 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1230:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1230 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:579:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   579 |     mixWtSite2 = nMolecules2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:574:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   574 |     mixWtSite2 = fraction2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:573:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   573 |     mixWtSite2old = fractionOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:578:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   578 |     mixWtSite2old = nMoleculesOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:363:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   363 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&polar[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:501:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |           fread(&thole[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:503:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   503 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   541 |     fread(&thole_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   228 |             if (drudetype[type[i]] != NOPOL_TYPE &&
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   229 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:193:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   222 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   227 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  224 make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   236 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:225:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:671:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   671 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   672 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:664:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   664 |     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
BUILDSTDERR:   665 |         di_closest != j)
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~                                                       
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:666:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   666 |       phicoul += factor_e * dcoul;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:666:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   663 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:658:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   658 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:315:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&polar[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&thole[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:351:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |     fread(&thole_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:276:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   276 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:281:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   310 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:311:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:315:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:363:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   363 |     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   300 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:304:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:375:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:376:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:384:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:392:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   433 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   434 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:435:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:500:23: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:495:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   495 |     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:143:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:969:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   969 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:972:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   972 |         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:996:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:997:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:998:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:841:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:848:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:849:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   884 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:885:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   885 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   886 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   888 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   889 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   890 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:891:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   891 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:892:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   892 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:982:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   982 |       (1.0/(denlj*denlj) - 1.0/denlj);
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:974:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   974 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:975:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   975 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:528:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:550:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
BUILDSTDERR:       |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:188:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               (1.0/(denlj*denlj) - 1.0/denlj);
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:181:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:182:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:77:10: warning: unused variable 'fraction' [-Wunused-variable]
BUILDSTDERR:    77 |   double fraction;
BUILDSTDERR:       |          ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:493:10: warning: unused variable 'fraction' [-Wunused-variable]
BUILDSTDERR:   493 |   double fraction,forcecoul,forcelj,phicoul,philj;
BUILDSTDERR:       |          ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:401:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:450:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:524:23: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   524 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:518:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   518 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:517:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:160:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:161:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:323:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:330:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:367:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:380:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:425:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:497:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:492:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:148:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:144:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:797:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   797 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   801 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   802 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:803:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:804:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   804 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:845:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:846:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:928:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   928 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:920:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   920 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:921:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   921 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:493:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   493 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:510:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   510 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
BUILDSTDERR:       |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:176:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR:   176 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:169:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:170:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:658:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   658 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   662 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   663 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:664:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:665:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   665 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:698:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   698 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   701 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   702 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:703:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   703 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:704:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:756:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:412:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   413 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:316:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:323:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:324:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:524:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   524 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   526 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:530:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:531:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:532:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:533:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   533 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:534:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   534 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:380:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:376:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   323 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:348:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   348 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:344:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   344 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:291:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   291 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:287:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp: In constructor 'LAMMPS_NS::MEAM::MEAM(LAMMPS_NS::Memory*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp:46:21: warning: operation on '((LAMMPS_NS::MEAM*)this)->LAMMPS_NS::MEAM::Ec_meam[i][j]' may be undefined [-Wsequence-point]
BUILDSTDERR:    46 |       Ec_meam[i][j] = re_meam[i][j] = alpha_meam[i][j] = delta_meam[i][j] = Ec_meam[i][j] = ebound_meam[i][j] = attrac_meam[i][j] = repuls_meam[i][j] = 0.0;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp:446:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   446 |     rhobar2 = rho02 / rho_bkgd2 * G2;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp:445:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   445 |     rhobar1 = rho01 / rho_bkgd1 * G1;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    63 |     for( int i = 0; i < parts.size(); ++i ){
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp:589:32: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   589 |     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   394 |    double f,dp;
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   375 |  double alp = al,alm = al;
BUILDSTDERR:       |                  ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   158 |   double x0,x1,dx,dr;
BUILDSTDERR:       |                   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   203 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   246 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   306 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   343 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   109 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   123 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:227:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   227 |        fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:228:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:229:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:230:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp:208:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   208 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp:209:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   259 |          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   260 |          fread(&a[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   263 |          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:234:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   234 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:235:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:240:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   240 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:241:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   241 |     fread(&C[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:242:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   242 |     fread(&N[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:235:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:238:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   238 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:180:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   180 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:181:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   181 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:184:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   184 |     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp:89:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    89 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:    90 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
BUILDSTDERR:       |                 ~~~~~~~~~                     
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:24: warning: unused variable 'mx' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                        ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:27: warning: unused variable 'itag' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                           ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:32: warning: unused variable 'jtag' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                                ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:10: warning: unused variable 'nbc' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |          ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:20: warning: unused variable 'tbl' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:30: warning: unused variable 'tbm' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |                              ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:600:13: warning: unused variable 'lmax_local' [-Wunused-variable]
BUILDSTDERR:   600 |   const int lmax_local = lmax;
BUILDSTDERR:       |             ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:609:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   609 |   double t0,t1;
BUILDSTDERR:       |          ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:609:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   609 |   double t0,t1;
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:618:18: warning: unused variable 'tsort' [-Wunused-variable]
BUILDSTDERR:   618 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
BUILDSTDERR:       |                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:618:42: warning: unused variable 'tlookup' [-Wunused-variable]
BUILDSTDERR:   618 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
BUILDSTDERR:       |                                          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:620:10: warning: unused variable 'ntsort' [-Wunused-variable]
BUILDSTDERR:   620 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
BUILDSTDERR:       |          ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:620:36: warning: unused variable 'ntlookup' [-Wunused-variable]
BUILDSTDERR:   620 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
BUILDSTDERR:       |                                    ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:1838:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  1838 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
BUILDSTDERR:       |         ^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:1838:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  1838 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
BUILDSTDERR:       |                         ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'Mmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: AKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:576:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
BUILDSTDERR:   576 | static void tr_count(const double * restrict A,
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:330:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:370:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:385:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |       fread(k[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:386:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |       fread(multiplicity[i],sizeof(int),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:387:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |       fread(shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp:332:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |       fread(a[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp:330:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:761:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   761 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:781:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   781 |       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:782:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   782 |       fread(phi_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:783:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   783 |       fread(phi_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:784:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   784 |       fread(phi_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:785:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   785 |       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:786:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   786 |       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:787:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   787 |       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:788:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   788 |       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:789:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   789 |       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:790:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   790 |       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp:506:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp:1026:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp:1027:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp:1019:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp:1020:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:2763:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2763 |   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
BUILDSTDERR:       |                      ^~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:39:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h:120:50: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |     bigint nbytes = ((bigint) sizeof(TYPE)) * n1*n2;
BUILDSTDERR:       |                                                  ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1798:7: note: 'dedup_size' was declared here
BUILDSTDERR:  1798 |   int dedup_size;
BUILDSTDERR:       |       ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1997:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
BUILDSTDERR:       |                                                                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1974:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1974 |     delete [] temp_limit_glove;
BUILDSTDERR:       |               ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:2032:54: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2032 |       if (stabilization_flag == 1) i_statted_tags[i] = 1;
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp:306:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   306 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp:307:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp:252:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   252 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp:253:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:123:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   123 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:124:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   124 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:128:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   128 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:129:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   129 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:133:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   133 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:134:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   134 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:138:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   138 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:139:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:143:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:144:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   144 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:148:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   148 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:149:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   149 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:153:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   153 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:154:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   154 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:158:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   158 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:159:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   159 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:163:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   163 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:164:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   164 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:168:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:169:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   169 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:173:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   173 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:174:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:178:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   178 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:179:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   179 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:183:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:184:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   184 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:188:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   188 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:189:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: mps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:193:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   193 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:194:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   194 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:198:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   198 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:199:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   199 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:203:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   203 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:204:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   204 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:208:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   208 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:209:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:213:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   213 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:214:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   214 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:218:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:219:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:223:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   223 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:224:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   224 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:228:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:229:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   222 |     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:462:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   462 |     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
BUILDSTDERR:       |                                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:458:22: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   458 |       params[curparam].numeta = nwords-1;
BUILDSTDERR:       |                      ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&rme[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&sigmae[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:316:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:317:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:318:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:308:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   308 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:344:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:304:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |           fread(&sigmae[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:305:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   305 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp:618:7: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   618 |   rc3 *= lconv;
BUILDSTDERR:       |   ~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp:613:6: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |   e2 *= econv;
BUILDSTDERR:       |   ~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:308:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   308 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&hgauss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&rmh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&sigmah[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:344:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairExTeP::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairExTeP::SR_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairKolmogorovCrespiFull::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::KC_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairILPGrapheneHBN::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::ILP_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:307:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:311:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |           fread(&aparm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&bparm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:341:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:315:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:349:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:833:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   833 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:839:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |           fread(&shift[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:840:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   874 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   875 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   876 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:877:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   877 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:878:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   878 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:969:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   969 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   970 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   961 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:961:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   961 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:964:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   959 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:532:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   532 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:558:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/srmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: c/USER-MISC/pair_lj_expand_coul_long.cpp:558:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   198 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   493 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   495 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   496 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   497 |           fread(&scale[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   526 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:11: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   622 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~
BUILDSTDERR:   625 |       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   622 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~~~~~~~~~~~~                                          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   617 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   615 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:13: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:13: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   617 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:13: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   615 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~
BUILDSTDERR:   280 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:311:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:317:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:318:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&rr[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&sscale,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&dscale,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:355:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:356:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:444:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:450:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:480:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   480 |       fgets(line, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:644:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   644 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:647:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   647 |   fgets(line, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:653:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   653 |   fgets(line, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:660:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   660 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:664:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:277:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:284:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:312:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:473:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:605:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   605 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:611:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   611 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:617:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   617 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:621:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   621 |                 fgets(line, MAXLINE, fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:699:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:704:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:705:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   705 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:733:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:734:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |     fread(&bptype,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:735:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |     fread(&btype,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:736:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   736 |     fread(&min,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:737:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   737 |     fread(&midpoint,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:738:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   738 |     fread(&exclude,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp: In member function 'void LAMMPS_NS::TemperNPT::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp:292:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   292 |         fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   293 |                me_universe,partner,swap,my_set_temp,partner_set_temp,
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   294 |                pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:388:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:389:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:391:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:396:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:338:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:180:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |         evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:165:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |     fpair = forcebuck6d * r32inv;
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:419:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |           fread(&buck6d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |           fread(&buck6d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |           fread(&buck6d3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |           fread(&buck6d4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&alpha_ij[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&vdwl_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:466:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:559:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   559 |     eng += phicoul;
BUILDSTDERR:       |     ~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:557:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   557 |     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:552:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   552 |     phibuck6d = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:188:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:452:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   452 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   456 |           fread(&buck6d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |           fread(&buck6d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   458 |           fread(&buck6d3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:459:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   459 |           fread(&buck6d4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:460:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   460 |           fread(&alpha_ij[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:461:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   495 |     fread(&vdwl_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   496 |     fread(&coul_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   497 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:499:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:500:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:501:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:42: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:207:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |             evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:36: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:608:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |     phibuck6d = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp:191:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
BUILDSTDERR:   191 |   if (atom_index < data->nlocal) {
BUILDSTDERR:       |       ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp:205:11: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   205 |     if (j == atom_index)
BUILDSTDERR:       |         ~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp:825:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   825 |     indxr[i] = irow;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp:815:16: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   815 |     ipiv[icol] += 1;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp: In member function 'void ptm_voro::voronoicell_base::add_memory_vorder(vc_class&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:213:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   213 |         for(j=0;j<current_vertex_order;j++) p1[j]=mem[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:213:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   213 |         for(j=0;j<current_vertex_order;j++) p1[j]=mem[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |                                                          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:219:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   219 |         for(j=0;j<current_vertex_order;j++) p1[j]=mec[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:219:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   219 |         for(j=0;j<current_vertex_order;j++) p1[j]=mec[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |                                                          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp: In member function 'void ptm_voro::voronoicell_base::init_base(double, double, double, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:260:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   260 |         for(int i=0;i<current_vertex_order;i++) mec[i]=0;up=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:260:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   260 |         for(int i=0;i<current_vertex_order;i++) mec[i]=0;up=0;
BUILDSTDERR:       |                                                          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pertype_parameters(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp:219:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |       fscanf(pf,"%d %lg %lg %lg",&itype,&v1,&v2,&v3);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp:513:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   513 |     qeq_time = t_end - t_start;
BUILDSTDERR:       |                ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp:543:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |     data->timing.nbrs = t_end - t_start;
BUILDSTDERR:       |                         ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp:119:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:54:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    54 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:57:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    57 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:76:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    76 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:88:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    88 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:93:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    93 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:94:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    94 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:95:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    95 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:148:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   148 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:174:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:193:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   193 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:212:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   212 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:232:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   232 |       fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:317:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:327:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |       fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:479:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:484:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   484 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:540:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:545:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:598:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   598 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:603:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   603 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:669:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   669 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:679:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   679 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:40:16: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    40 |   for(i = 1; i < n; i++){
BUILDSTDERR:       |              ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:67:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    67 |   for( i = 2; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:71:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    71 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:75:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    75 |   for( i = 1; i < n-2; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:79:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    79 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:86:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    86 |   for( i = 1; i < n; ++i ){
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:117:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   117 |   for( i = 1; i < n; ++i )
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:121:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   121 |   for( i = 1; i < n; ++i )
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:125:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   125 |   for( i = 0; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:130:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   130 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:135:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   135 |   for( i = 1; i < n; ++i ){
BUILDSTDERR:       |               ~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:337:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   337 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:336:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:336:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:457:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   457 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:456:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   456 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:456:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   456 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:706:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   706 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:675:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   675 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:644:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   644 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:174:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |     if (strcmp(arg[iarg],"units") == 0) {
BUILDSTDERR:       |                        ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:435:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |   fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:438:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:489:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:493:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   493 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:501:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:510:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:528:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:542:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:565:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:568:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:621:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   621 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:633:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   633 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:655:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   655 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:668:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   668 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:675:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   675 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:695:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   695 |     fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:698:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   698 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:708:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   708 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:719:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   719 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:722:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   722 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:727:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:735:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:738:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   738 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:745:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   745 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:748:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   748 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:758:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   758 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:761:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   761 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:766:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   766 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
/buildmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: dir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:792:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   792 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:795:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   795 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:803:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:813:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   813 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:1459:43: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1459 |             ddij = aCoeff*(r- rc-nang) *(2+bCoeff*(r-rc-nang))*exp(bCoeff*r);
BUILDSTDERR:       |                                         ~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:1458:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1458 |           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
BUILDSTDERR:       |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:2594:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2594 |     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
BUILDSTDERR:       |                                                             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:2813:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2813 |     dt = t_end - t_init;
BUILDSTDERR:       |     ~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp:150:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:284:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:285:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   285 |     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:286:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:287:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp:229:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp:230:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp:183:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp:261:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp:262:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp:261:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp:262:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:525:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:532:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   566 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   567 |     fread(&truncw,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   570 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:571:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   571 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:660:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
BUILDSTDERR:       |               ~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:694:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   694 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:677:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   677 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   678 |         offset[itype][jtype];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:668:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:671:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   671 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   666 |       phicoul = prefactor*erfc1;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:685:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   685 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             ecoul = prefactor*erfc1;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:191:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:213:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:196:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   197 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:204:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:188:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:188:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:525:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:532:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   566 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   567 |     fread(&truncw,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   570 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:571:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   571 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:679:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   679 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:695:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   695 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:679:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   679 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:670:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   670 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:670:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   670 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:673:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   673 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       phicoul = prefactor*erfc1;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:686:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   686 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:199:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Junmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: 2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |             ecoul = prefactor*erfc1;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:194:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   194 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:215:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   215 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:199:23: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:206:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:191:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:191:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp:140:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp:140:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP13post_neighborEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP19pre_exchange_newtonEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP21pre_exchange_onesidedEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP22pre_exchange_no_newtonEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp:351:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   351 |     qeq_time = t_end - t_start;
BUILDSTDERR:       |                ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |       p = 2.0 - p;
BUILDSTDERR:       |       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |       p = 2.0 - p;
BUILDSTDERR:       |       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS15NPairFullBinOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here
BUILDSTDERR:    50 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairFullBinAtomonlyOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS20NPairFullBinGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   119 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   120 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS17NPairFullMultiOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   121 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS15NPairFullNsqOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS20NPairFullNsqGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS29NPairHalfBinAtomonlyNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalfBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   117 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   118 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfBinNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   126 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   127 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS21NPairHalfBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   150 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   151 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS24NPairHalfBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   124 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
BUILDSTDERR:    50 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS24NPairHalfMultiNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   124 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   125 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairHalfMultiNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   157 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   158 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfMultiNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   133 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   134 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalfNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
BUILDSTDERR:    53 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
BUILDSTDERR:    52 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
BUILDSTDERR:    52 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfNsqNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   121 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
BUILDSTDERR:    56 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
BUILDSTDERR:    55 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
BUILDSTDERR:    55 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS21NPairHalfNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   131 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   132 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfRespaBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   149 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
BUILDSTDERR:    56 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    58 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    95 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:192:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   192 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfRespaBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   194 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   195 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   212 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    94 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:238:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS29NPairHalfRespaBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   155 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   156 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    94 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfRespaNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   145 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   146 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
BUILDSTDERR:    57 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                 ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    59 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    98 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:186:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfSizeBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfRespaNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   163 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   164 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
BUILDSTDERR:    58 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                    ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    60 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    99 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:205:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS25NPairHalfSizeBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS28NPairHalfSizeBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfSizeNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS25NPairHalfSizeNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairHalffullNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalffullNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:148:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:148:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:181:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:181:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:152:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   152 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:152:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   152 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp:147:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               (sw3i[jtype] + sw4i[jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp:147:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               (sw3i[jtype] + sw4i[jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   254 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   259 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   254 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   259 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   461 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   461 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMPmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: itialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.h:22,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS13PairAIREBOOMP14REBO_neigh_thrEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:999:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   999 |             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
BUILDSTDERR:       |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   569 |           fpair = dC*dwij / rij;
BUILDSTDERR:       |                   ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:631:18: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   631 |           f[atomm][0] += fm[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:595:18: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   595 |           f[atomk][0] -= fi[0] + fj[0];
BUILDSTDERR:       |                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.h:22,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS11PairCombOMP15Short_neigh_thrEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   167 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   167 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:240:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:237:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:240:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:237:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:158:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   158 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:158:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   158 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:180:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:180:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR:   160 |                                       fxtmp,fytmp,fztmp,
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   161 |                                       delx,dely,delz,thr);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp:226:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   226 |     data->timing.nbrs = t_end - t_start;
BUILDSTDERR:       |                         ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:56:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    56 |   MPI_Comm comm;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'void InitializeOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, output_controls*, mpi_datatypes*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:134:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   134 |     snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   135 |     "System could not be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                      ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 58 and 1081 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:140:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   140 |     snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   141 |     "Sim_data couldn't be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                       ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 59 and 1082 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:153:41: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   153 |       snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                         ^~
BUILDSTDERR:   154 |       "System could not be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                        ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 58 and 1081 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:159:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   159 |     snprintf( errmsg, 512, "Error on: %s"
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   160 |     "Could not open output files! Terminating.", msg );
BUILDSTDERR:       |                                                  ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 52 and 1075 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:166:41: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   166 |       snprintf( errmsg, 512, "Error on: %s."
BUILDSTDERR:       |                                         ^~
BUILDSTDERR:   167 |       " Couldn't create lookup table! Terminating.", msg );
BUILDSTDERR:       |                                                      ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 55 and 1078 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |                 ecoul = prefactor*erfc;
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |                 ecoul = prefactor*erfc;
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   432 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
/builddir/build/BUILmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: D/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   432 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1335 |             f[jH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1331 |             f[jH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1304 |             f[iH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1300 |             f[iH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1597 |             f[jH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1593 |             f[jH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1566 |             f[iH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1562 |             f[iH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp:240:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp:242:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp:405:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp:230:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp:226:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   226 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:234:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   234 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:231:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   231 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:238:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp:236:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   248 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   249 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   255 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   256 |             offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   277 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp:239:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:40: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   241 |               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp:225:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp:221:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   221 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp:232:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   232 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   333 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   333 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:330:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   330 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:338:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp:235:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp:224:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp:232:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   232 |                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp:312:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   313 |                                       fforce[2],-r12[0],-r12[1],-r12[2]);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp:337:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   337 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],fforce[2],
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   338 |                                       -r12[0],-r12[1],-r12[2]);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp:223:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   273 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   277 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp:302:15: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   302 |       f[i][2] += delz*fpair;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp:298:24: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   298 |       if (eflag) evdwl *= factor_lj;
BUILDSTDERR:       |                  ~~~~~~^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   325 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   330 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   329 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   306 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   284 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   285 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:282:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:286:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   353 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   351 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   358 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   359 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                                     ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   417 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   418 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   274 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   275 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:281:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:281:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:283:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   322 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   305 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   310 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   314 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   315 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   280 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:34: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   280 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:376:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:377:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:378:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:379:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:404:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:426:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   311 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   321 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   313 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   313 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~
BUILDSTDERR:   388 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:71: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                           
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Linking CXX shared library liblammps.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,liblammps.so.0 -o liblammps.so.0 @CMakeFiles/lammps.dir/objects1.rsp libmpi_stubs.a -lfftw3 -lpython3.7m -ljpeg -lpng -lz -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a libcolvars.a libh5md.a libgpu.a -lopenblas -lhdf5 -lsz -lz -ldl -lm -lOpenCL 
/usr/bin/cmake -E cmake_symlink_library liblammps.so.0 liblammps.so.0 liblammps.so
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Built target lammps
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target lmp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Linking CXX executable lmp
/usr/bin/cmake -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o  -o lmp -Wl,-rpath,/builddir/build/BUILD/lammps-stable_5Jun2019/serial: liblammps.so.0 libmpi_stubs.a -lfftw3 -lpython3.7m -ljpeg -lpng -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Built target lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles 0
+ popd
~/build/BUILD/lammps-stable_5Jun2019
+ test -n ''
+ for mpi in '' mpich openmpi
+ test -n mpich
+ module load mpi/mpich-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-aarch64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-aarch64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-aarch64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-aarch64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-aarch64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-aarch64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-aarch64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-aarch64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-aarch64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-aarch64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/etc/modulefiles/mpi/mpich-aarch64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=aWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
BUILDSTDERR: ++ export LD_LIBRARY_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ LOADEDMODULES=mpi/mpich-aarch64
BUILDSTDERR: ++ export LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-aarch64:1;/usr/share/lmod/lmod/share/man:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=:/usr/share/man/mpich-aarch64:/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MODULEPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ MPI_BIN=/usr/lib64/mpich/bin
BUILDSTDERR: ++ export MPI_BIN
BUILDSTDERR: ++ MPI_COMPILER=mpich-aarch64
BUILDSTDERR: ++ export MPI_COMPILER
BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ MPI_HOME=/usr/lib64/mpich
BUILDSTDERR: ++ export MPI_HOME
BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/mpich-aarch64
BUILDSTDERR: ++ export MPI_INCLUDE
BUILDSTDERR: ++ MPI_LIB=/usr/lib64/mpich/lib
BUILDSTDERR: ++ export MPI_LIB
BUILDSTDERR: ++ MPI_MAN=/usr/share/man/mpich-aarch64
BUILDSTDERR: ++ export MPI_MAN
BUILDSTDERR: ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich
BUILDSTDERR: ++ export MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/mpich
BUILDSTDERR: ++ export MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich
BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ MPI_SUFFIX=_mpich
BUILDSTDERR: ++ export MPI_SUFFIX
BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/mpich-aarch64
BUILDSTDERR: ++ export MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ _LMFILES_=/etc/modulefiles/mpi/mpich-aarch64
BUILDSTDERR: ++ export _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=aWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ mkdir -p mpich
~/build/BUILD/lammps-stable_5Jun2019/mpich ~/build/BUILD/lammps-stable_5Jun2019
+ pushd mpich
+ cp -al ../lammps-testing-827be7af84ca100d394ea1cf6d3bc49f6a8eef92 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
BUILDSTDERR: ++ test -n mpich
BUILDSTDERR: ++ echo -DBUILD_MPI=OFF -DPKG_MPIIO=OFF
+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.7/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DLAMMPS_MACHINE=mpich -DLAMMPS_LIB_SUFFIX=mpich -DCMAKE_INSTALL_MANDIR=/usr/share/man/mpich-aarch64 -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags' -DBUILD_MPI=OFF -DPKG_MPIIO=OFF -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 9.1.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- The C compiler identification is GNU 9.1.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Running test discovery...
-- Found 53 tests.
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.6.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found PythonLibs: /usr/lib64/libpython3.7m.so (found version "3.7.3") 
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.36") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib64/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.0.2
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.8.20")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") 
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/atom_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/beck_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/born_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/born_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/born_coul_long_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/born_coul_wolf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/born_coul_wolf_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/buck_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/buck_coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/buck_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/charmm_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/colloid_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/coul_debye_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/coul_dsf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/coul_long_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/device_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/dipole_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/dipole_lj_sf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/dipole_long_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/dpd_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/eam_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/ellipsoid_nbor_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/gauss_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj96_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_class2_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_coul_debye_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_coul_msm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_cubic_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_dsf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_expand_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_expand_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_gromacs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_sdk_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/lj_sdk_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/mie_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/morse_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/neighbor_cpu_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/neighbor_gpu_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/pppm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/soft_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/sw_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/table_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/ufm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/vashishta_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/yukawa_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/yukawa_colloid_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/zbl_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/gayberne_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/gayberne_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/re_squared_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/re_squared_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/tersoff_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/tersoff_zbl_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.3") 
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * OpenMP
 * FFTW3
 * LAPACK
 * Threads
 * BLAS
 * PythonLibs
 * JPEG
 * PNG
 * ZLIB
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      9.1.1
   C++ Flags        -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;LMP_USER_OMP
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  9.1.1
     C Flags  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp 
-- Linker flags:
   Executable      -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags
-- Shared libraries  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags
-- Link libraries: mpi_stubs;/usr/lib64/libfftw3.so;/usr/lib64/libpython3.7m.so;/usr/lib64/libjpeg.so;/usr/lib64/libpng.so;/usr/lib64/libz.so;/usr/lib64/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as FFT
-- Configuring done
-- Generating done
BUILDSTDERR: CMake Warning:
BUILDSTDERR:   Manually-specified variables were not used by the project:
BUILDSTDERR:     CMAKE_CXX_FLAGS_RELEASE
BUILDSTDERR:     CMAKE_C_FLAGS_RELEASE
BUILDSTDERR:     CMAKE_Fortran_FLAGS_RELEASE
BUILDSTDERR:     INCLUDE_INSTALL_DIR
BUILDSTDERR:     LIB_INSTALL_DIR
BUILDSTDERR:     LIB_SUFFIX
BUILDSTDERR:     SHARE_INSTALL_PREFIX
BUILDSTDERR:     SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_5Jun2019/mpich
+ /usr/bin/make -O -j4
/usr/bin/cmake -S/builddir/build/BUILD/lammps-stable_5Jun2019/cmake -B/builddir/build/BUILD/lammps-stable_5Jun2019/mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
Scanning dependencies of target mpi_stubs
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target msi2lmp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/poems.dir/DependInfo.cmake --color=
Scanning dependencies of target poems
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/colvars.dir/DependInfo.cmake --color=
Scanning dependencies of target colvars
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Linking C static library libmpi_stubs.a
/usr/bin/cmake -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1
/usr/bin/ar qc libmpi_stubs.a  CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o
/usr/bin/ranlib libmpi_stubs.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Built target mpi_stubs
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:5:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:847:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:856:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:864:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:873:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:881:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:979:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:987:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:994:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1001:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1008:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1026:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1035:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1039:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1048:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1052:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/atc.dir/DependInfo.cmake --color=
Scanning dependencies of target atc
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:5:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:479:3,
BUILDSTDERR:     inlined from 'MakeLists' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:46:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:500:7,
BUILDSTDERR:     inlined from 'MakeLists' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:46:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c: In function 'ReadCarFile':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:101:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   101 |   fgets(line,MAX_LINE_LENGTH,CarF); /* Read header line */
BUILDSTDERR:       |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:108:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   108 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Comment line */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:109:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   109 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Date stamp */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:110:5: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   110 |     fscanf(CarF,"%*s %lf %lf %lf %lf %lf %lf %*s",
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   111 |            &pbc[0],&pbc[1],&pbc[2],&pbc[3],&pbc[4],&pbc[5]);
BUILDSTDERR:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:124:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   124 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Comment line */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:125:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   125 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Date Stamp */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:146:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   146 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:180:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   180 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:189:7: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |       fscanf(CarF,"%s %lf %lf %lf %*s %d %s %s %lf",
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   190 |              atoms[k].name,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~
BUILDSTDERR:   191 |              &(atoms[k].x[0]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   192 |              &(atoms[k].x[1]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   193 |              &(atoms[k].x[2]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   194 |              &(atoms[k].molecule),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   195 |              atoms[k].potential,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   196 |              atoms[k].element,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   197 |              &(atoms[k].q));
BUILDSTDERR:       |              ~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:209:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:210:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   210 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c: In function 'SearchAndFill':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:114:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   114 |     fgets(line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:119:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |   fgets(line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:121:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   121 |     fgets( line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:223:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   223 |     fgets( line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:13:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:198:11:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:216:9:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Linking C executable msi2lmp
/usr/bin/cmake -E cmake_link_script CMakeFiles/msi2lmp.dir/link.txt --verbose=1
/usr/bin/cc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o  -o msi2lmp -lm 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Built target msi2lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/cslib.dir/DependInfo.cmake --color=
Scanning dependencies of target cslib
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp:636:11: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   636 |   int64_t bigbytes,bigbytesround;
BUILDSTDERR:       |           ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:125:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   125 |   if (me == 0) fread(lengths,sizeof(int),2,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:132:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   132 |   if (me == 0) fread(header,sizeof(int),nheader,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:135:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   135 |   if (me == 0) fread(buf,1,nbuf,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp:60:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    60 |       fgets(port,MPI_MAX_PORT_NAME,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Linking CXX static library libcsnompi.a
/usr/bin/cmake -P CMakeFiles/cslib.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/cslib.dir/link.txt --verbose=1
/usr/bin/ar qc libcsnompi.a  CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/ranlib libcsnompi.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Built target cslib
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/h5md.dir/DependInfo.cmake --color=
Scanning dependencies of target h5md
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building C object CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Linking C static library libh5md.a
/usr/bin/cmake -P CMakeFiles/h5md.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/h5md.dir/link.txt --verbose=1
/usr/bin/ar qc libh5md.a  CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o
/usr/bin/ranlib libh5md.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Built target h5md
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:35,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp:25:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Built target ocl_get_devices
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Scanning dependencies of target gpu
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   182 |     if (_ef_atom)
BUILDSTDERR:       |        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   196 |       if (_vf_atom)
BUILDSTDERR:       |          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   231 |     if (_ef_atom)
BUILDSTDERR:       |        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   250 |       if (_vf_atom)
BUILDSTDERR:       |          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:313:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
BUILDSTDERR:   224 |   int ii, vstart=0, iend=_inum;
BUILDSTDERR:       |       ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp: In instantiation of 'void LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, int, double**, int*, int*, int*, int**, bool, bool, bool, bool, int&, double, bool&) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:396:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:269:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   269 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp: In instantiation of 'int** LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, double**, int*, double*, double*, tagint*, int**, tagint**, bool, bool, bool, bool, int&, int**, int**, double, bool&) [with numtyp = float; acctyp = double; tagint = int]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:396:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:338:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   338 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::CHARMMLong<numtyp, acctyp>::init(int, double, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double, double, double*, double, double, double, double, double**, double**, bool) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:79:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp> host_write(h_size*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Colloid<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, double**, double**, double**, double**, double**, double**, double**, int**, int, int, int, int, double, double, FILE*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview_form +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:97:18: note: '*((void*)& dview_form +24)' was declared here
BUILDSTDERR:    97 |   UCL_H_Vec<int> dview_form(lj_types*lj_types,*(this->ucl_device),
BUILDSTDERR:       |                  ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp: In member function 'int LAMMPS_AL::CoulDSF<numtyp, acctyp>::init(int, int, int, int, int, double, double, FILE*, double, double*, double, double, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:83:5: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    83 |     host_write[i]=host_special_coul[i];
BUILDSTDERR:       |     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:533:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   448 |   int eflag, vflag;
BUILDSTDERR:       |              ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'void LAMMPS_AL::GayBerne<numtyp, acctyp>::clear() [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:587:37: warning: '*((void*)& err_flag +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   587 |     CL_SAFE_CALL(clEnqueueReadBuffer(cq,src.cbegin(),block,src_offset,n,
BUILDSTDERR:       |                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:155:18: note: '*((void*)& err_flag +24)' was declared here
BUILDSTDERR:   155 |   UCL_H_Vec<int> err_flag(1,*(this->ucl_device));
BUILDSTDERR:       |                  ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::LJClass2Long<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:75:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    75 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::LJDSF<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:79:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::CGCMMLong<numtyp, acctyp>::init(int, double**, int**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:76:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    76 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:35,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_kernel.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_kernel.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_texture.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'void LAMMPS_AL::RESquared<numtyp, acctyp>::clear() [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:587:37: warning: '*((void*)& err_flag +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   587 |     CL_SAFE_CALL(clEnqueueReadBuffer(cq,src.cbegin(),block,src_offset,n,
BUILDSTDERR:       |                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:144:18: note: '*((void*)& err_flag +24)' was declared here
BUILDSTDERR:   144 |   UCL_H_Vec<int> err_flag(1,*(this->ucl_device));
BUILDSTDERR:       |                  ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp: In member function 'int LAMMPS_AL::RESquared<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, int**, double**, double**, double**, double**, double**, const double*, int, int, int, int, double, double, FILE*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:105:3: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   105 |   host_write[1]=static_cast<numtyp>(host_special_lj[1]);
BUILDSTDERR:       |   ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    91 |     for (int i = 0; i < node.getChildren().size(); i++) {
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   113 |             for (int i = 1; i < args.size(); i++)
BUILDSTDERR:       |                             ~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<double*, double*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   170 |     for (int i = 0; i < variablesToCopy.size(); i++)
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::Operation*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   175 |     for (int step = 0; step < operation.size(); step++) {
BUILDSTDERR:       |                        ~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   180 |             for (int i = 0; i < args.size(); i++)
BUILDSTDERR:       |                             ~~^~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    40 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    47 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    53 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    58 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::SW<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:75:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    75 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Table<numtyp, acctyp>::init(int, double**, double***, double**, double*, int, int, int, int, double, double, FILE*, int, int, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write_int +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:90:18: note: '*((void*)& host_write_int +24)' was declared here
BUILDSTDERR:    90 |   UCL_H_Vec<int> host_write_int(lj_types*lj_types,*(this->ucl_device),
BUILDSTDERR:       |                  ^~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:181:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   181 |             if (pos != tokens.size())
BUILDSTDERR:       |                 ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:190:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   190 |         if (pos != tokens.size())
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::__cxx11::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:201:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   201 |     if (pos == tokens.size())
BUILDSTDERR:       |         ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:227:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   227 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:241:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   241 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp: In instantiation of 'void LAMMPS_AL::Tersoff<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:331:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:261:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   261 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Tersoff<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:159:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   159 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:83:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    83 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Linking CXX static library libcolvars.a
/usr/bin/cmake -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc libcolvars.a  CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/ranlib libcolvars.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Built target colvars
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
Scanning dependencies of target gitversion
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles" -P /builddir/build/BUILD/lammps-stable_5Jun2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Built target gitversion
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp: In instantiation of 'void LAMMPS_AL::TersoffMod<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:331:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:261:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   261 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::TersoffMod<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:159:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   159 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:83:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    83 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp: In instantiation of 'void LAMMPS_AL::TersoffZBL<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:357:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:286:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   286 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::TersoffZBL<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double, double, double, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:179:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   179 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:90:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    90 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
BUILDSTDERR:    36 |  int data;
BUILDSTDERR:       |      ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
BUILDSTDERR:    32 |  TreeNode *left;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
BUILDSTDERR:    22 | TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
BUILDSTDERR:       | ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Vashishta<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:79:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 15%] Linking CXX static library libpoems.a
/usr/bin/cmake -P CMakeFiles/poems.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/poems.dir/link.txt --verbose=1
/usr/bin/ar qc libpoems.a  CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o
/usr/bin/ranlib libpoems.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 15%] Built target poems
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Array.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Array2D.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp:164:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   164 |         fread(&myVal,sizeof(double),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseVector.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.h:11,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.h:11,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Linking CXX static library libgpu.a
/usr/bin/cmake -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1
/usr/bin/ar qc libgpu.a  CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/ranlib libgpu.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Built target gpu
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Linking CXX static library libatc.a
/usr/bin/cmake -P CMakeFiles/atc.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1
/usr/bin/ar qc libatc.a  CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/ranlib libatc.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Built target atc
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/lammps.dir/DependInfo.cmake --color=
Scanning dependencies of target lammps
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp:132:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   132 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:337:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:346:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp:979:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   979 |       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp:130:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   130 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:338:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:347:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:350:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp:714:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   714 |   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
BUILDSTDERR:       |                            ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp:312:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |   int x0;
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp:1449:16: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1449 |   int index=-1,dir;
BUILDSTDERR:       |                ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp:818:34: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   818 |         for (i = atom->nlocal; i < nlast; i++) {
BUILDSTDERR:       |                                ~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |           ptr[n] = 180.0*theta/MY_PI;
BUILDSTDERR:       |                    ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:308:60: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |           ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:400:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             ptr[n] = engrot;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:397:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |             ptr[n] = engvib;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:403:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   403 |             ptr[n] = engtrans;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:391:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |             ptr[n] = engpot;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:231:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   231 |   double inertia,omegasq;
BUILDSTDERR:       |                  ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:409:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ptr[n] = vvib;
BUILDSTDERR:       |             ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:412:62: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |             ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |         btype = onemols[imol]->bond_type[iatom][i];
BUILDSTDERR:       |                                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |         btype = onemols[imol]->bond_type[iatom][i];
BUILDSTDERR:       |                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1512 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1513 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1512 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1586:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1586 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1587:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1587 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1586:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1586 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1691:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1691 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1692:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1692 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1691:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1691 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:416:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |         if (minflag[idim] == COORD) minvalue[idim] *= scale;
BUILDSTDERR:       |                                     ~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp:320:60: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |           ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp:244:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp:513:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   513 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
BUILDSTDERR:       |                           ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp:444:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   444 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
BUILDSTDERR:       |                           ~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   218 |           cbuf[n] = 180.0*acos(c)/MY_PI;
BUILDSTDERR:       |                 ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp:197:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   198 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
BUILDSTDERR:       |                 ~~~~~~~~~                     
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   129 |   } else if (style == SANGLE) {
BUILDSTDERR:       |          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:668:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
BUILDSTDERR:       |                                                ~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:668:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
BUILDSTDERR:       |                        ~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   229 |     ranmol = new RanMars(lmp,molseed+comm->me);
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:119:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   119 |     if (strcmp(arg[iarg],"basis") == 0) {
BUILDSTDERR:       |                        ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:322:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:331:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:334:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:516:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   516 |     atom->v = vhold;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:515:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   515 |     atom->x = xhold;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:517:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     atom->image = imagehold;
BUILDSTDERR:       |     ~~~~~~~~~~~~^~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:855:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:855:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:756:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:756:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                         ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1033:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1033 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1027:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1027 |             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
BUILDSTDERR:       |                                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
BUILDSTDERR:       |                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:893:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   893 |           image->draw_sphere(bodyarray[k],color,bodyarray[k][3]);
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1033:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1033 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:1032:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |                 (*ptr != 0.0 && value != 0.0))
BUILDSTDERR:       |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:529:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |     double *values;
BUILDSTDERR:       |             ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:528:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |     double *ptr,*ptrhold;
BUILDSTDERR:       |                  ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp:777:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   777 |     tmp = MAX(nneigh,nneighfull);
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp:777:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp:537:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   537 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp:482:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   482 |     values[lastindex][i] = scalar;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp:499:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp:1057:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1057 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp:854:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp:299:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   299 |   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:700:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:911:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   911 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:968:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |         else if (lengthone != length)
BUILDSTDERR:       |              ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   629 |     else vector[i] += scalar;
BUILDSTDERR:       |          ~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |         if (value == -1)
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp:151:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   151 |         set[index].style = FINAL;
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:844:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   844 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:814:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   814 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:784:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   784 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::post_neighbor()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_onesided()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_no_newton()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_newton()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual int LAMMPS_NS::FixNeighHistory::unpack_exchange(int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::FixNeighHistory::allocate_pages()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::unpack_restart(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   566 |   df1 = df1*cos_target[m] - ddf1*sin_target[m];
BUILDSTDERR:       |                             ~~~~^~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   457 |       if (imageflag)
BUILDSTDERR:       |       ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |     extarray = finalvalue;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |     else if (value != finalvalue)
BUILDSTDERR:       |          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp:65:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    65 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp:56:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    56 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp:518:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   518 |           bool xin = ((surface[0]+tdir[0]) >= -radius) &&
BUILDSTDERR:       |                       ~~~~~~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:739:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   739 |   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:751:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   751 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:755:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   755 |       if (me == 0) fread(names[i],sizeof(char),n,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:319:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:328:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:331:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:7: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:33: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |                      ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:20: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |         ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   271 |   p[3] = c_phi*p[3] + s_phi*kp[3];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |   p[2] = c_phi*p[2] + s_phi*kp[2];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |   p[1] = c_phi*p[1] + s_phi*kp[1];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |   p[0] = c_phi*p[0] + s_phi*kp[0];
BUILDSTDERR:       |                       ~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp:14:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::NeighList::setup_pages(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1675 |     if (newtflag) {
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1783 |     if (newtflag) {
BUILDSTDERR:       |     ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   103 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBinAtomonly::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   109 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   110 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   110 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   111 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   105 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    89 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   103 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinAtomonlyNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   107 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   108 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   116 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   147 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   105 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   106 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    90 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:99:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    99 |         if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                              ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    91 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:149:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   131 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   132 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:149:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    72 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:195:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   177 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   178 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:150:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    71 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1363 |   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1380:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1380 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1383:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1383 |     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1386:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1386 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1389:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1389 |     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1392:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1392 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1395:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1395 |     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1405:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1405 |   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1422:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1422 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1425:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1425 |     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1428:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1428 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1431:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1431 |     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1434:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1434 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    72 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   129 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   130 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    76 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:165:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   149 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:165:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    78 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   117 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    79 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalffullNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalffullNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkip::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:153:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   153 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    64 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSize::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2on::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2onOneside::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:281:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:285:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   285 |           fread(&AA[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |           fread(&BB[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&aa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&beta[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:321:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:1678:17: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1678 |       e = single(0,1,itype,jtype,rsq,1.0,1.0,f);
BUILDSTDERR:       |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:1688:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1688 |   if (atom->q) atom->q = q_hold;
BUILDSTDERR:       |                ~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:389:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |         ftable[i] = qqrd2e/r * fgamma;
BUILDSTDERR:       |                     ~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:390:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |         etable[i] = qqrd2e/r * egamma;
BUILDSTDERR:       |                     ~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:39: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
BUILDSTDERR:       |                                ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:39: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
BUILDSTDERR:       |                                         ~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:333:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:337:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:338:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:339:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   339 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:340:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:341:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:342:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   342 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:373:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:374:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:376:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:365:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:369:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   369 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:374:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:410:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:488:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   488 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:489:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   488 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   489 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:483:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   483 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:484:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   484 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:483:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   483 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:167:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:163:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   163 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:164:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:168:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:163:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   163 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:364:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:368:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   368 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:369:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   369 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:486:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   486 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:487:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   486 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   487 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:481:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:482:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   482 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:481:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:170:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:167:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:171:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:311:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:317:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:318:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:348:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:349:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:350:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:367:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:374:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:375:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:410:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:468:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:468:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:147:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:248:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   248 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:251:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:275:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   275 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:276:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   276 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:277:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:152:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   152 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:153:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   153 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:154:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   154 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:155:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   155 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:256:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   256 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:281:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:253:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:277:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:278:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   278 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:233:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   233 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:237:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:238:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   238 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:266:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   266 |     fread(&t_start,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:267:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   267 |     fread(&t_stop,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:268:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   268 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:269:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   269 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:270:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   270 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:318:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:323:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:324:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:355:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:284:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&b[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:317:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:318:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    47 |   int multflag;
BUILDSTDERR:       |       ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:674:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   674 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:697:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   697 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:700:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:706:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   706 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:710:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   710 |       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:713:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   713 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:717:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   717 |       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   399 |   int multflag;
BUILDSTDERR:       |       ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:610:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   610 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:614:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:615:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   615 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:616:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   616 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:645:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   645 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:646:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   646 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:647:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   647 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:648:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   648 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:392:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |             fpair = factor_lj*forcelj*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:395:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   395 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   396 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:316:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:348:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   348 |       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:345:46: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:133:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:130:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:173:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   173 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:174:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:175:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:176:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   176 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:177:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   177 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:215:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   215 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   216 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:211:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:109:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:112:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:604:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   604 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:608:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   608 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:609:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:610:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   610 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:639:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   639 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:640:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   640 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:641:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   641 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:642:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   642 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:386:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             fpair = factor_lj*forcelj*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:389:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   390 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:356:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:361:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:362:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:363:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:394:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   394 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:396:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:452:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   453 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:139:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   139 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:379:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:383:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:465:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   465 |     eng += phicoul;
BUILDSTDERR:       |     ~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:464:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:464:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:458:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   458 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   459 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:167:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   162 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:167:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:375:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:379:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:380:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:381:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:412:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:413:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   413 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:414:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   414 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:171:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:164:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   165 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:327:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:331:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:332:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:333:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |           fread(&shift[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:334:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:364:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:365:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:366:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:344:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:348:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:349:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:350:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:351:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:381:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:382:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:383:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:438:44: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:140:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:382:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&cut_coul_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:421:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   421 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:503:30: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   503 |         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:500:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |     philj += ljsw5[itype][jtype];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:492:29: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         tc*tc*tc * (coulsw3 + coulsw4*tc);
BUILDSTDERR:       |                    ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:159:49: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
BUILDSTDERR:       |                                        ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:169:38: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:166:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:165:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                                              ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:355:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:359:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   359 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:361:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:362:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:394:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   394 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:453:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   453 |       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:451:33: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   451 |     philj = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:448:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   448 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   449 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:143:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:141:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   141 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:138:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                              lj4[itype][jtype]) - offset[itype][jtype];
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:286:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:291:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   291 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:292:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   292 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:631:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   631 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:635:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   635 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:636:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   636 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:637:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   637 |           fread(&gamR[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:638:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   638 |           fread(&gamA[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:639:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   639 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:670:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   670 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:671:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   671 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:672:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   672 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:673:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   673 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   394 |             fpair = factor_mie*forcemie*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   398 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:268:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   268 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:272:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   272 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:273:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   273 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:274:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   274 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:275:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   275 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:303:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   303 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:304:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:305:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   305 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:249:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:253:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |           fread(&prefactor[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:254:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   254 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:289:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:293:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   293 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:294:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   294 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:295:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   295 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:324:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:255:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   255 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:259:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   259 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:260:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   260 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:287:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:288:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:289:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:290:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:978:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   978 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:979:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   979 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:980:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   980 |     fread(&ewaldflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:981:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   981 |     fread(&pppmflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:982:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   982 |     fread(&msmflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:983:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |     fread(&dispersionflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:984:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |     fread(&tip4pflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1043:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1043 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
BUILDSTDERR:       |                                   ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1043:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1043 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
BUILDSTDERR:       |        ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1040:9: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1040 |     phi = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |     ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:175:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:179:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   179 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:204:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   204 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:205:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   205 |     fread(&coeffflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp:141:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   141 |               (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp:289:26: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   289 |       (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:687:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   687 |   vec[5] = kme + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:686:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   686 |   vec[4] = jme + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:685:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   685 |   vec[3] = ime + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:881:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   881 |   return index;
BUILDSTDERR:       |          ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:559:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   559 |       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:487:18: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   487 |     else lo[dim] = valuehalf;
BUILDSTDERR:       |          ~~~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:1051:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1051 |       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:307:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |       fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:311:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       fread(&procsperfile,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:314:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |         fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:318:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |         fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:324:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |         fread(buf,sizeof(double),n,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:384:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |       fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:387:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |       fread(&procsperfile,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:396:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |         fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:400:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |         fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:406:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |         fread(buf,sizeof(double),n,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1106:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1106 |           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1288:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1288 |   if (me == 0) fread(value,sizeof(char),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1300:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1300 |   if (me == 0) fread(vec,sizeof(int),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1311:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1311 |   if (me == 0) fread(vec,sizeof(double),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:191:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |       contact[i].delz = xorig[2] - zs;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:190:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |       contact[i].dely = xorig[1] - ys;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:189:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |       contact[i].delx = xorig[0] - xs;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   335 |   add_contact(0,x,xp,yp,zp);
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   717 |     add_contact(0,x,xp,yp,zp);
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp:173:35: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |     if (stopflag) update->endstep = stop;
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp:171:38: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |     if (startflag) update->beginstep = start;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~~~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp:1152:19: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1152 |           quat[1] = 0.0;
BUILDSTDERR:       |           ~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp:149:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |   MPI_Comm_split(uorig,0,key,&uworld);
BUILDSTDERR:       |   ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:547:48: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |       if (vfield) input->variable->compute_atom(zvar,igroup,&vfield[0][2],3,0);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:540:61: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |     if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:535:61: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |     if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:527:31: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   527 |           if (zstyle) v[i][2] += vz;
BUILDSTDERR:       |                       ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:526:31: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   526 |           if (ystyle) v[i][1] += vy;
BUILDSTDERR:       |                       ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:521:31: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   521 |           if (xstyle) v[i][0] = vx;
BUILDSTDERR:       |                       ~~~~~~~~^~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:34:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h:173:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |     sfree(array);
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:169:12: note: 'vhold' was declared here
BUILDSTDERR:   169 |   double **vhold;
BUILDSTDERR:       |            ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:684:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   684 |       fscanf(fp,"%d",&nextindex);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3929:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3929 |     newtree->value = value;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4703:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4703 |   int op,opprevious,flag1,flag2;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4193:30: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4193 |     if (method == AVE) value /= nvec;
BUILDSTDERR:       |                        ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4007:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4007 |     int index,nvec,nstride;
BUILDSTDERR:       |                    ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:1185:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1185 |   int op,opprevious;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:1007:53: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1007 |         if (mask[i] & groupbit) result[m] = vstore[i];
BUILDSTDERR:       |                                             ~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3487:38: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3487 |       argstack[nargstack++] = value1 + value2*randomequal->gaussian();
BUILDSTDERR:       |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3382:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3382 |       argstack[nargstack++] = sqrt(value1);
BUILDSTDERR:       |                               ~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   139 |         inertia[0] = tbonus[tri[i]].inertia[0];
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |         length = lbonus[line[i]].length;
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    94 |       shape = bonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                 ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp:306:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   306 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   307 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:466:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:469:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:473:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:477:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:478:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:479:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:511:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   511 |     fread(&gamma,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&upsilon,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:515:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:516:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   516 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:729:30: warning: '*((void*)& dchi2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   729 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:728:30: warning: '*((void*)& dchi2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   728 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:727:30: warning: 'dchi2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   727 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:729:45: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   729 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:728:45: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   728 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:727:45: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   727 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:444:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:447:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:451:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   451 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:455:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   455 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:456:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   456 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:457:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:485:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   485 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:486:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   486 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp:380:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   381 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |   int nedges,nentries;
BUILDSTDERR:       |       ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp:340:26: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   340 |       vertex_against_wall(i, wall_pos, x, f, torque, side,
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   341 |                           contact_list, num_contacts, facc);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp:303:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   303 |         if (delr > eradi) dz = cylradius;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp:326:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   327 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp:335:28: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   335 |         sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque);
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:376:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:377:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:378:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:380:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:381:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:382:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:385:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:245:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   245 |       int interact, num_contacts, done;
BUILDSTDERR:       |           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                                   ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:602:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   602 |   double eradi,eradj,rradi,rradj;
BUILDSTDERR:       |          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:602:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   602 |   double eradi,eradj,rradi,rradj;
BUILDSTDERR:       |                ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:604:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   604 |   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
BUILDSTDERR:       |                                ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:604:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   604 |   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
BUILDSTDERR:       |                                      ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:707:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   707 |   int ni, npi, ifirst, nei, iefirst;
BUILDSTDERR:       |                        ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:707:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   707 |   int ni, npi, ifirst, nei, iefirst;
BUILDSTDERR:       |                             ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:708:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   708 |   int nj, npj, jfirst, nej, jefirst;
BUILDSTDERR:       |           ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:709:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   709 |   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
BUILDSTDERR:       |                                ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   107 |   int nei,nej,iefirst,jefirst;
BUILDSTDERR:       |               ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:107:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   107 |   int nei,nej,iefirst,jefirst;
BUILDSTDERR:       |       ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |   int ni,nj,npi,npj,ifirst,jfirst;
BUILDSTDERR:       |                     ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:213:15: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |       if (npi == 1 && npj == 1) {
BUILDSTDERR:       |           ~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:186:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   186 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:187:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:188:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   188 |     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:189:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp:899:6: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without
BUILDSTDERR:   899 | void LAMMPS::init_pkg_lists()
BUILDSTDERR:       |      ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:277:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   277 |       int interact, num_contacts;
BUILDSTDERR:       |           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:2347:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2347 |   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
BUILDSTDERR:       |                      ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:2347:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2347 |   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
BUILDSTDERR:       |                            ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:221:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   221 |       if (r > eradi + eradj + cut_inner) continue;
BUILDSTDERR:       |               ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                                           ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                                   ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                     ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:269:14: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |       } else if (npi == 1) {
BUILDSTDERR:       |              ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:841:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:842:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:843:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:844:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:846:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:847:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:848:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:849:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:851:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   851 |     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:852:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   852 |     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:853:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:854:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:856:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   856 |     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:857:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   857 |     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:858:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   858 |     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:859:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   859 |     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:861:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   861 |     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:862:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   862 |     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:863:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   863 |     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:864:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   864 |     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/buimake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: ld/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:866:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   866 |     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:867:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:868:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:869:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:871:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:875:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   875 |     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:876:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   876 |     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:877:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   877 |     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:608:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   608 |     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:609:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:611:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   611 |     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:612:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   612 |     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:613:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   613 |     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:614:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:615:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   615 |     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:616:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   616 |     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:821:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   821 |       ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   822 |                fabcd[0],fabcd[2],fabcd[3],
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   823 |                delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   824 |                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:310:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   310 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:348:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:366:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:464:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   465 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:464:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   145 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:406:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:410:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:411:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   411 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:412:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:445:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:538:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   539 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:538:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:531:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:534:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   534 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:176:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   185 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:178:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:178:36: warning: 'itamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: ble' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp:82:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp:82:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                     ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:609:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:613:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   613 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:614:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:649:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   649 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:650:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   650 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:651:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   651 |     fread(&flagfld,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:652:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   652 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:653:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   653 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:654:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   654 |     fread(&t_target, sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:655:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   655 |     fread(&seed, sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:656:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   656 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:657:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   657 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:658:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   658 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:659:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   659 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:308:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |           Fbmag = prethermostat*sqrt(a_pu);
BUILDSTDERR:       |                                 ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:96:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    96 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                     ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:400:31: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:404:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |           fread(&a12[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:438:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:439:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   439 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:440:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:543:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |   return factor_lj*phi;
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:194:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   194 |       f[i][2] += delz*fpair;
BUILDSTDERR:       |                  ~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:689:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   689 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:693:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   693 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:694:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   694 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:727:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:728:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   728 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:729:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   729 |     fread(&flagfld,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:730:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   730 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:731:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   731 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:732:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   732 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:733:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:734:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:735:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1916:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1916 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1920:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1920 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1921:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1921 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1953:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1953 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1954:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1954 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1955:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1955 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1956:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1956 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1957:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1957 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1958:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1958 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1959:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1959 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1960:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1960 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:143:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:148:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:143:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:188:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:180:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:185:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:182:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:149:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:146:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:150:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:186:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:178:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:186:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:180:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:180:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:168:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:168:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:170:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:170:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:517:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:543:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:543:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:188:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:192:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   192 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   193 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:185:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   245 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                                     ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:301:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   302 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |           fread(&epsilon_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |           fread(&sigma_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   357 |           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:680:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   680 |   int ninserted_mols = ninserted_atoms / natom;
BUILDSTDERR:       |       ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:696:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   696 |       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:654:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   654 |           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:503:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   503 |         coords[0][3] = radtmp;
BUILDSTDERR:       |         ~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:14: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |                             ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:27: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |                ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1174:25: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1174 |   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
BUILDSTDERR:       |   ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1201:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1201 |     F_pulloff = 3*M_PI*coh*Reff;
BUILDSTDERR:       |                 ~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:546:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&kn,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   573 |     fread(&kt,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   574 |     fread(&gamman,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:575:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   575 |     fread(&gammat,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:576:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   576 |     fread(&xmu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:577:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   577 |     fread(&dampflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |               ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1254:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1254 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1258:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1258 |           fread(&normal_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1259:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1259 |           fread(&damping_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1260:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1260 |           fread(&tangential_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1261:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1261 |           fread(&roll_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1262:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1262 |           fread(&twist_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1263:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1263 |           fread(&normal_coeffs[i][j],sizeof(double),4,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1264:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1264 |           fread(&tangential_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1265:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1265 |           fread(&roll_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1266:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1266 |           fread(&twist_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1267:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1267 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1645:14: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1645 |   svector[8] = magtortwist;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1643:14: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1643 |   svector[6] = fr3;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1642:14: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1642 |   svector[5] = fr2;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1641:14: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1641 |   svector[4] = fr1;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1644:14: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1644 |   svector[7] = fr;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:14: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                             ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:27: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1327:11: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1327 |   double *history,*allhistory;
BUILDSTDERR:       |           ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1462:25: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1462 |   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
BUILDSTDERR:       |   ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1427:13: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1427 |     t0 = coh*coh*R2*R2*E;
BUILDSTDERR:       |          ~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1427:20: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1427 |     t0 = coh*coh*R2*R2*E;
BUILDSTDERR:       |          ~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:385:19: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |           history = &allhistory[size_history*jj];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:440:24: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             history[1] += vtr2*dt;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:312:21: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |           touch[jj] = 1;
BUILDSTDERR:       |           ~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |           F_pulloff = 3*MY_PI*coh*Reff;
BUILDSTDERR:       |                       ~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:20: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |           ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:42: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                                   ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:33: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                      ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:356:31: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:229:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   229 |       allhistory = firsthistory[i];
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:228:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   228 |       touch = firsttouch[i];
BUILDSTDERR:       |                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:918:36: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   918 |           FOURTHIRDS*mix_stiffnessE(Emod[i][j],Emod[i][j],
BUILDSTDERR:       |                      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   919 |                                     poiss[i][j],poiss[i][j]);
BUILDSTDERR:       |                                     ~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:913:30: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   913 |       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:924:32: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:933:36: warning: 'tangential_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   933 |         tangential_coeffs[i][j][0] = tangential_coeffs[j][i][0] =
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   934 |           tangential_coeffs_one[0];
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~~  
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:915:20: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   915 |         Emod[i][j] = Emod[j][i] = normal_coeffs_one[0];
BUILDSTDERR:       |         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:937:36: warning: 'tangential_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   937 |         tangential_coeffs[i][j][k] = tangential_coeffs[j][i][k] =
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   938 |           tangential_coeffs_one[k];
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~~  
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:937:36: warning: 'tangential_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1214:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1214 |   return cutoff;
BUILDSTDERR:       |          ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp: In member function 'virtual void LAMMPS_NS::FixTuneKspace::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:158:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   158 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:163:33: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   163 |       sprintf(new_pair_style,"%s/msm",base_pair_style);
BUILDSTDERR:       |                                 ^~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 24 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:148:31: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   148 |     sprintf(new_pair_style,"%s/msm",base_pair_style);
BUILDSTDERR:       |                               ^~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 24 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:141:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   141 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:134:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   134 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:247:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   247 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:247:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   247 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   248 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:243:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   243 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:242:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:188:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:185:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:184:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:426:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:430:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:431:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:432:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:433:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   433 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:434:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   434 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:435:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:469:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:470:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:471:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   471 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:472:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:567:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:567:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   568 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   560 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:560:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   560 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:563:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   563 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:190:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                    make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR:                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:191:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:403:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:409:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:410:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:445:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:538:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:538:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:531:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:534:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   534 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:183:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:183:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:177:36: warning: 'itable' may be used uninitiamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: lized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:242:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:242:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:238:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:237:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:184:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:181:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:180:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:296:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   296 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:299:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   299 |         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:376:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:378:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:378:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:376:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:162:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:162:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:206:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:208:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:208:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:206:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:146:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:146:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:148:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:148:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:360:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |           fread(&buck_a_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:366:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |           fread(&buck_c_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:367:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&cut_buck_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:404:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:828:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   828 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   832 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:833:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   833 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   834 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   835 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   870 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:972:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   972 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:967:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   967 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:962:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   962 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:520:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   520 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |              make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR:  table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:196:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:201:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:205:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:205:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1642:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1642 |                 v5sum += v5_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1641:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1641 |                 v4sum += v4_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1640:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1640 |                 v3sum += v3_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1639:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1639 |                 v2sum += v2_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1638:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1638 |                 v1sum += v1_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1637:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1637 |                 v0sum += v0_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1997:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |                 v5sum += v5_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1996:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1996 |                 v4sum += v4_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1995:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1995 |                 v3sum += v3_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1994:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1994 |                 v2sum += v2_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1993:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1993 |                 v1sum += v1_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1992:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1992 |                 v0sum += v0_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:522:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   522 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   514 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   514 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:517:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:512:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   512 |       phicoul = prefactor*egamma;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:216:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   216 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:211:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:220:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:213:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:213:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:220:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:386:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:413:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   413 |               forcecoul = prefactor * fgamma;
BUILDSTDERR:       |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:385:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:416:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:416:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   896 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   900 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:901:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   901 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:902:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   902 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:903:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   903 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   935 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   936 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   937 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:938:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   938 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   939 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   940 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   941 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1049:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1049 |       philj6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  1050 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1044:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1044 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1032:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1032:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1035:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1035 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1030:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1030 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:572:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   572 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: fsw_coul_long.cpp:611:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   611 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   611 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   218 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:223:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:239:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               evdwl6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   240 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:220:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:220:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:115:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   115 |   int i,j,ii,jj,inum,jnum,itype,jtype,itable;
BUILDSTDERR:       |                                 ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:474:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   474 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   475 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   466 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   466 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:469:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |       phicoul = prefactor*egamma;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:365:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   365 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:388:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   388 |               forcecoul = prefactor * fgamma;
BUILDSTDERR:       |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:364:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   364 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:391:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:391:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:208:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:203:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:212:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   213 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:205:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:536:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   536 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   537 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   538 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   548 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   414 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:416:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:393:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   393 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:389:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:336:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:332:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   332 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:416:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:798:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   798 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   802 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:803:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:804:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   804 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   835 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   836 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:841:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:932:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   932 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   933 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:924:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:924:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:927:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   927 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   922 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:512:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   512 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:538:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:538:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:21: warning: 'erfcmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: ' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:191:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   192 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:478:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:479:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:382:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   382 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:382:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:384:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   384 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:361:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   361 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:357:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   357 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   304 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   300 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:384:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   384 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:360:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |           fread(&epsilon_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:365:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |           fread(&sigma_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:366:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   398 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1547 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1548 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1549 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1550 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1551 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1553 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1554:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1554 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1555 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1556 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1557 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1558 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:979:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   979 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:975:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   975 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:948:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   948 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:944:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   944 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   450 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:452:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:429:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   429 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:425:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   425 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:372:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   372 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:368:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   368 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:452:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:718:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   718 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:714:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   714 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:687:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   687 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:683:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialimake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: zed]
BUILDSTDERR:   683 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1390:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1390 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1386:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1386 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1321:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1321 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1317:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1317 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp:264:9: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   264 |       i = ilist[ii];
BUILDSTDERR:       |       ~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp:263:21: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   263 |     for (ii = 0; ii < inum; ii++) {
BUILDSTDERR:       |                  ~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp:641:24: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   641 |       if (me == 0) grab(fp,filename,file->nr,&file->w2r[i][j][1]);
BUILDSTDERR:       |                    ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:312:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:315:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:340:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:341:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |     fread(&cut_triple,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairComb::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairComb::Short_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3398:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  3398 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3399:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  3399 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairAIREBO::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairAIREBO::REBO_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:1241:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1241 |             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3283:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3283 |   return piRC;
BUILDSTDERR:       |          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:811:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   811 |           fpair = dC*dwij / rij;
BUILDSTDERR:       |                   ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:873:18: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   873 |           f[atomm][0] += fm[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:837:18: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   837 |           f[atomk][0] -= fi[0] + fj[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:326:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:327:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:338:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:350:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:358:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:366:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:375:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |       fgets(s,MAXLIB,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:384:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:391:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |       fgets(s,MAXLIB,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:404:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:422:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   422 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:431:19: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |              fgets(s,MAXLIB,fp);
BUILDSTDERR:       |              ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:446:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:464:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:473:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |               fgets(s,MAXLIB,fp);
BUILDSTDERR:       |               ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:488:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   488 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:506:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:515:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |               fgets(s,MAXLIB,fp);
BUILDSTDERR:       |               ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairComb3::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairComb3::Short_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:2309:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2309 |             {com6+=prefac_ij2*pcrossk*dfc_k;}
BUILDSTDERR:       |              ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:1794:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1794 |      prady  += 1.0 *  btor[2] * bbtor * att_eng;
BUILDSTDERR:       |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:1793:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1793 |      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
BUILDSTDERR:       |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:469:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:470:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:472:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:787:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   787 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:143:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:168:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:192:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   192 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:143:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:168:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:194:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   194 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4981:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4981 |     fgets(s,MAXLINE,fp);  // skip first comment line
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4982:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4982 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4987:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4987 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5016:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5016 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5084:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5084 |     fgets(s,MAXLINE,fp);  // skip first comment line
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5086:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5086 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5088:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5088 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5092:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5092 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5097:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5097 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5101:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5101 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5103:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5103 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5105:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5105 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5114:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5114 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5121:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5121 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5125:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5125 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5129:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5129 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5131:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5131 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5135:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5135 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5137:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5137 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5141:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5141 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5143:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5143 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5147:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5147 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5149:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5149 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5153:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5153 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5155:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5155 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5159:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5159 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5161:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5161 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5163:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 516make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: 3 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5172:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5172 |             fgets(s,MAXLINE,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5179:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5179 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5187:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5187 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5195:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5195 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5203:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5203 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5210:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5210 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5214:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5214 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5231:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5231 |             fgets(s,MAXLINE,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5222:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  5222 |     if(nws==3) {
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4967:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4967 |   int i,j,k,n,m;
BUILDSTDERR:       |             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3752 |               ev_tally_xyz(bt_i,bt_j,nlocal,newton_pair,0.0,0.0,ftmp[0],ftmp[1]
BUILDSTDERR:       |               ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  3753 |                   ,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1775:56: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1775 |                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
BUILDSTDERR:       |                                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
BUILDSTDERR:  1776 |                         *-dis_jk[2]*r_ik*r_ik)/(r_ik*r_ik*r_jk*r_jk);
BUILDSTDERR:       |                         ~~~~~~~~~~~~~~~~~~~~~~          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1500:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1500 |             bt_sg[nb_jk].temp=temp_jk;
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1763:52: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1763:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                                     ~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1764:25: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  1764 |                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
BUILDSTDERR:       |                         ^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3489:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3489 |               else if(temp_kk==temp_ji&&setting==0) {
BUILDSTDERR:       |                       ~~~~~~~^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp:387:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   387 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:970:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   970 |           fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:974:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   974 |           fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp: In member function 'void LAMMPS_NS::PairEIM::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:500:22: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |       if (!grabsingle(fptr,i))
BUILDSTDERR:       |            ~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:987:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:993:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:994:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   994 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:995:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:996:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:997:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:998:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:999:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1000:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1001:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1002:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1003:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1004:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1005:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1006:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1007:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1008:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1009:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1010:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1011:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1011 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1012:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1013:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1014:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1015:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1016:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1017:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1017 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1018:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1019:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1020:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1023:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1023 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1032:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fgets(s,MAXLINE,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1039:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1039 |         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
BUILDSTDERR:       |                     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1046:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1046 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1052:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1052 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairLCBOP::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairLCBOP::SR_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:579:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   579 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:580:43: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   580 |     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                      ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:596:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   596 |       fgets(line,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:614:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:650:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   650 |       fgets(line,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:881:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   881 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:199:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |         if (emb > epsilon) {
BUILDSTDERR:       |         ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   290 |         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   629 |   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   607 |   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   202 |   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   618 |   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:596:44: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   596 |   for (iangle = 0; iangle < num_angle[iprev]; iangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   202 |   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:420:24: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   420 |               angle_eng(jnextangletype,j,jnext,jlast);
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:419:24: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |               angle_eng(jangletype,jprev,j,jnext) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:418:24: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |               angle_eng(inextangletype,i,inext,ilast) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:417:24: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   417 |               angle_eng(iangletype,iprev,i,inext) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:201:9: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |   int i,j,ii,jj,m,inum,jnum;
BUILDSTDERR:       |         ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp: In member function 'virtual void LAMMPS_NS::FixTFMC::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp:255:15: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   255 |     group->xcm(igroup,masstotal,cm);
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp:47:63: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    47 |     lmp->cslib = new CSlib(clientserver-1,arg[2],arg[3],&world);
BUILDSTDERR:       |                                                               ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    43 |   if (protocol == MD) {
BUILDSTDERR:       |   ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:350:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:354:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:355:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:383:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&max_cell_size,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:385:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp:2297:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2297 |           if (imolecule == molecule[j]) continue;
BUILDSTDERR:       |           ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:116:19: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |           x[m][2] = xold[2];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:115:19: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   115 |           x[m][1] = xold[1];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:114:19: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |           x[m][0] = xold[0];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:15:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.h:299:48: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   299 |     if (map_style == 1) return map_array[global];
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
BUILDSTDERR:    42 |   tagint atomid;
BUILDSTDERR:       |          ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:559:15: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   559 |   while (size >= num && num_of_bits < 32) {
BUILDSTDERR:       |          ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:600:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:   600 |   while (bytes[num_of_bytes] >= num) {
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:654:19: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   654 |   if (num_of_bits >= num_of_bytes * 8) {
BUILDSTDERR:       |       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:655:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   655 |     for (i = 0; i < num_of_bytes; i++) {
BUILDSTDERR:       |                 ~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:660:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   660 |     for (i = 0; i < num_of_bytes-1; i++) {
BUILDSTDERR:       |                 ~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:695:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:   695 |     if (lastbits < num_of_bits) {
BUILDSTDERR:       |         ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:935:21: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
BUILDSTDERR:   935 |     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
BUILDSTDERR:       |                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:46:25: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:    46 | #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
BUILDSTDERR:       |                     ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
BUILDSTDERR:   939 |     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
BUILDSTDERR:       |              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:46:25: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:    46 | #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
BUILDSTDERR:       |                     ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
BUILDSTDERR:  1115 |     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
BUILDSTDERR:       |              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1141:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1141 |         thiscoord[2] = receivebits(buf, bitsizeint[2]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1140:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1140 |         thiscoord[1] = receivebits(buf, bitsizeint[1]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1139:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1139 |         thiscoord[0] = receivebits(buf, bitsizeint[0]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:950:28: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   950 |           abs(thiscoord[0] - prevcoord[0]) < larger &&
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:951:28: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   951 |           abs(thiscoord[1] - prevcoord[1]) < larger &&
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:952:28: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   952 |           abs(thiscoord[2] - prevcoord[2]) < larger) {
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   324 |         } else if (me == proc && i == iatom) {
BUILDSTDERR:       |                    ~~~~~~~~~~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp:589:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   589 |       atom->nbonds += onemols[imol]->nbonds;
BUILDSTDERR:       |                                   ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:322:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:326:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:327:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:328:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:329:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:330:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:360:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:361:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:362:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:373:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:382:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   414 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:478:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   478 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
BUILDSTDERR:       |                                           ~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:150:65: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~~~~~       
BUILDSTDERR:   150 |                                         r0n[itype][jtype]*rninv -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   151 |                                         nn[itype][jtype] *
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~       
BUILDSTDERR:   152 |                                         r0m[itype][jtype]*rminv) -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~~~~~~~ 
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:152:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   151 |                                         nn[itype][jtype] *
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   152 |                                         r0m[itype][jtype]*rminv) -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:420:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:424:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:425:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:426:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:466:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:467:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   467 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:553:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   553 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:553:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   553 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:556:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:551:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   551 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:563:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   563 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
BUILDSTDERR:       |                                           ~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:186:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:191:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:196:57: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   197 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:188:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
   make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR:    |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:248:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   248 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:249:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:250:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   250 |     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:251:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp:196:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   196 |   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp:218:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:249:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:250:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   250 |     fread(&b[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:251:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp:218:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp:292:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   292 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp:293:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   293 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:220:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   220 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:221:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   221 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:222:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   222 |     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:228:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:229:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:230:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:231:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   231 |     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:232:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   232 |     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:175:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:176:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   176 |     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:177:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   177 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:281:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:284:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:170:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   170 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:430:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:432:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |     fread(&weightflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   471 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&weightflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:338:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:339:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   339 |     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:340:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:208:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |       pd = -pd;
BUILDSTDERR:       |       ~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:207:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |       p = 2.0 - p;
BUILDSTDERR:       |       ~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:321:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:374:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   374 |         if (donor_flag == 0) type2param[i][j][k] = nparams;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:301:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |         if (donor_flag == 0) type2param[i][j][k] = nparams;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:378:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   439 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   441 |     fread(&cut_coul_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:501:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   501 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:167:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:200:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   200 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:133:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:133:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:436:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   436 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   441 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:533:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   533 |       philj6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   534 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:528:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:195:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |               evdwl6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   196 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:99:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    99 |   int i,j,ii,jj,inum,jnum,itype,jtype;
BUILDSTDERR:       |                                 ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   620 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   624 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   625 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   626 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   662 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   663 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   665 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   666 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   668 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   669 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   670 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   671 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   672 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:361:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   361 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:357:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   357 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   304 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   300 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:479:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:506:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:507:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   507 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:508:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   508 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:509:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   509 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:510:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:321:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   321 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:317:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:264:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   264 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:260:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp:116:52: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |     if (mask[i] & groupbit) dilatation[i] = theta[i];
BUILDSTDERR:       |                                             ~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:501:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:502:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   502 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:569:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:573:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   573 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:574:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   574 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:575:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   575 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:576:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   576 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:577:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   577 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:578:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   578 |           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:423:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&kspring[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:429:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:430:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:551:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   551 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:555:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   555 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:556:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   556 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:557:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   557 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:558:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   558 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:559:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   559 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:560:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   560 |           fread(&m_lambdai[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:561:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   561 |           fread(&m_taubi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp:490:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   490 |   return m;
BUILDSTDERR:       |          ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp:967:33: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   967 |     if (me == 0) nlen = readline(fp,&line,&maxline);
BUILDSTDERR:       |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:307:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |     fbiasr = fbias / r0max / rmax;
BUILDSTDERR:       |              ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:307:12: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |     fbiasr = fbias / r0max / rmax;
BUILDSTDERR:       |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:326:29: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |   outvec[4] = atom->tag[jmax];
BUILDSTDERR:       |                             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:325:29: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   325 |   outvec[3] = atom->tag[imax];
BUILDSTDERR:       |                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp:480:19: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   480 |     maxhalf[iold] = ijhalf;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixHyperLocal::unpack_reverse_comm(int, int*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In constructor 'LAMMPS_NS::FixHyperLocal::FixHyperLocal(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixHyperLocal::build_bond_list(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   616 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
BUILDSTDERR:       |                                  ~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   616 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
BUILDSTDERR:       |                                                        ~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |      fshake = ((FixShake*) modify->fix[id_shake]);
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:397:23: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |         tflag[m-1][2] = zflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:390:60: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |       if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
BUILDSTDERR:       |                                                      ~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:390:44: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |       if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
BUILDSTDERR:       |                                      ~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   359 |       if (domain->dimension == 2 && zflag == 1.0)
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:365:23: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   365 |         fflag[m-1][1] = yflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:364:23: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   364 |         fflag[m-1][0] = xflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:342:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   342 |     if (strcmp(arg[iarg],"force") == 0) {
BUILDSTDERR:       |                        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |     if (custom_flag) delete [] molecule;
BUILDSTDERR:       |                                ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1483:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1483 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1478:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1478 |         lbonus[line[i]].theta = theta;
BUILDSTDERR:       |                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1462:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1462 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1406:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1406 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1405:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1405 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1405:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1405 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1628:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1628 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1615:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1615 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1577:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1577 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1576:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1576 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1576:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1576 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2224:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2224 |           radone = lbonus[line[i]].length;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2297:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2297 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2123:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2123 |     if (infile && inbody[ibody]) continue;
BUILDSTDERR:       |                   ~~~~~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2104:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2104 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2021:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2021 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2086:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2086 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp: In member function 'virtual void LAMMPS_NS::FixWallPiston::post_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp:289:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   289 |       if (zloflag && x[i][2] < zlo - roughoff) {
BUILDSTDERR:       |                                ~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2561:60: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 93 [-Wformat-truncation=]
BUILDSTDERR:  2561 |       snprintf(str,128,"Cannot open fix rigid restart file %s",outfile);
BUILDSTDERR:       |                                                            ^~  ~~~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:15:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 36 and 163 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2659:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2659 |   if (me == 0) fclose(fp);
BUILDSTDERR:       |                ~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1394 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1389 |         lbonus[line[i]].theta = theta;
BUILDSTDERR:       |                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1374 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1532 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1519 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   515 |   if (langflag) random = new RanMars(lmp,seed + comm->me);
BUILDSTDERR:       |                                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2380 |           radone = lbonus[line[i]].length;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2466:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2466 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2264:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2264 |     if (infile && inbody[ibody]) continue;
BUILDSTDERR:       |                   ~~~~~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2242 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2157 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2224 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:539:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:543:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |           fread(&DM[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:544:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |           fread(&v_dmx[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:545:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |           fread(&v_dmy[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:546:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |           fread(&v_dmz[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:547:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:548:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   548 |           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:549:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   549 |           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:550:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   550 |           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:584:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   584 |     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:585:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   585 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:586:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   586 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:506:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:510:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |           fread(&J1_mag[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:511:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   511 |           fread(&J1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:512:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |           fread(&J2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:513:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |           fread(&J2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:514:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:523:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   523 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:527:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |           fread(&ME[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:528:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |           fread(&v_mex[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&v_mey[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&v_mez[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:561:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   561 |     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:562:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   562 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:563:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   563 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:695:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   695 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:699:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |           fread(&g1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:700:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |           fread(&g1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:701:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   701 |           fread(&g2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:702:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   702 |           fread(&g2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:703:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   703 |           fread(&q1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:704:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |           fread(&q1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:705:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   705 |           fread(&q2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:706:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   706 |           fread(&q2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:707:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   707 |           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:741:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   741 |     fread(&cut_spin_neel_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:742:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   742 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:743:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   743 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp:55:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    55 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp: In function '_ZN9LAMMPS_NS8PairSNAP17compute_optimizedEii._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp:477:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   477 |     int ielem;
BUILDSTDERR:       |         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp:521:12: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   521 |     double starttime, endtime;
BUILDSTDERR:       |            ^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |         ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |                   ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:30: warning: unused variable 'value' [-Wunused-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |                              ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:    91 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   108 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
BUILDSTDERR:       |              ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   146 |   PyObject * result = PyEval_CallObject(py_init, NULL);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   164 |   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   182 |   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   200 |   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   219 |   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   237 |   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
BUILDSTDERR:       |              ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2966:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2966 |       c1 = tbonus[tri[i]].c1;
BUILDSTDERR:       |                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2954:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2954 |       length = lbonus[line[i]].length;
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2938:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2938 |       shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3049:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3049 |       inertia = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3036:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3036 |       biglist[k].theta = lbonus[line[i]].theta;
BUILDSTDERR:       |                                        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3024:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3024 |       shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1017:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1017 |       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
BUILDSTDERR:       |                               ~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2549:22: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2549 |   AtomVecTri::Bonus *tbonus;
BUILDSTDERR:       |                      ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2703:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2703 |           double length = lbonus[line[i]].length;
BUILDSTDERR:       |                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2679:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2679 |           double *shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1548:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1548 |       xbcoll[2] = xbcollfirst[2];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1547:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1547 |       xbcoll[1] = xbcollfirst[1];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1544:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1544 |       xscoll[1] = xscollfirst[1];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1545:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1545 |       xscoll[2] = xscollfirst[2];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1546:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1546 |       xbcoll[0] = xbcollfirst[0];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1543:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1543 |       xscoll[0] = xscollfirst[0];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1551:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1551 |       norm[2] = normfirst[2];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1550:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1550 |       norm[1] = normfirst[1];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1549:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1549 |       norm[0] = normfirst[0];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1578:12: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1578 |       else if (type != WALL)
BUILDSTDERR:       |            ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1577:50: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1577 |         force_torque(v[i],vsnew,xscoll,xbcoll,f[j],NULL);
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp:410:37: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
BUILDSTDERR:   410 |   else if (format && strlen(format) != ninput+noutput)
BUILDSTDERR:       |                      ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp:320:20: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |     PyTuple_SetItem(pArgs,i,pValue);
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:516:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   516 |       for (j=0; j<narea.size(); ++j)
BUILDSTDERR:       |                 ~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:531:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   531 |       if (neighs != narea.size())
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:548:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   548 |         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
BUILDSTDERR:       |                   ~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:592:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   592 |       if (neighs != narea.size())
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:249:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |   return correction;
BUILDSTDERR:       |          ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:331:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   332 |                 virial[0] + virial[1] + virial[2]) / 3.0 *
BUILDSTDERR:       |                 ~~~~~~~~~                     
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:393:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   393 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:295:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   295 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:296:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   296 |     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:297:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   297 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:371:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   371 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:457:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |           fread(&kappa_dh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:463:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:464:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |           fread(&b_dh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:465:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:466:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:499:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:500:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:501:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   685 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   832 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |           fread(&k_cxst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |           fread(&a_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   850 |           fread(&b_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   851 |           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |           fread(&a_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   855 |           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   856 |           fread(&b_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   857 |           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   859 |           fread(&a_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/paimake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: r_oxdna2_coaxstk.cpp:860:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   860 |           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   861 |           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   862 |           fread(&b_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   863 |           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   865 |           fread(&a_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   866 |           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |           fread(&b_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   936 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   937 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   938 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:575:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   575 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:717:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   717 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   722 |           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   723 |           fread(&sigma_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   724 |           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   725 |           fread(&b_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   726 |           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   728 |           fread(&sigma_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   729 |           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   730 |           fread(&b_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   731 |           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   732 |           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:733:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |           fread(&sigma_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:734:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:735:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |           fread(&b_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:736:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   736 |           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:779:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   779 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:780:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   780 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:781:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   781 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   831 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&k_cxst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |           fread(&a_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&b_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |           fread(&a_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&b_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |           fread(&a_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_comake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: axstk.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&b_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1024 |           fread(&a_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&b_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1030 |           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1031 |           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1033 |           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1034 |           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1035 |           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1036 |           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1037 |           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1107 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1108 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1109 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:799:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   799 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:978:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   978 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |           fread(&a_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   985 |           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   986 |           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   988 |           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   989 |           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   990 |           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:992:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   992 |           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |           fread(&shift_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |           fread(&a_hb1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&b_hb1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&a_hb2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&b_hb2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&a_hb3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&b_hb3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1011 |           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&a_hb4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&b_hb4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1017 |           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&a_hb7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&b_hb7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1023 |           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&a_hb8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&b_hb8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1029:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1029 |           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1104 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1105:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1105 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1106:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1106 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:833:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   833 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:995:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1000:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |           fread(&epsilon_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&a_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&cut_st_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&cut_st_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1005:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1006:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&b_st_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&b_st_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&shift_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1012:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |           fread(&a_st4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&b_st4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1018:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |           fread(&a_st5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&b_st5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&dtheta_st5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1024:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1024 |           fread(&a_st6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&b_st6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1030:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1030 |           fread(&a_st1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1031:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1031 |           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1032:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fread(&b_st1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1033:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1033 |           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1034:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1034 |           fread(&a_st2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1035:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1035 |           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1036:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1036 |           fread(&b_st2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1037:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1037 |           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1103 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1104:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1104 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1105 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   785 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   950 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   955 |           fread(&k_xst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   956 |           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   957 |           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   958 |           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   959 |           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   960 |           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   961 |           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   962 |           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   963 |           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   965 |           fread(&a_xst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   966 |           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   967 |           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   968 |           fread(&b_xst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   969 |           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   971 |           fread(&a_xst2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   972 |           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   973 |           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   974 |           fread(&b_xst2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   975 |           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   977 |           fread(&a_xst3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_resmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: ult [-Wunused-result]
BUILDSTDERR:   978 |           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   979 |           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   980 |           fread(&b_xst3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   981 |           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |           fread(&a_xst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   985 |           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   986 |           fread(&b_xst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   989 |           fread(&a_xst7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   990 |           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   992 |           fread(&b_xst7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |           fread(&a_xst8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&b_xst8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1072 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1073 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1074 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:457:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:461:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:462:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:463:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |           fread(&power[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:464:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:465:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |           fread(&kappa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:466:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |           fread(&powerT[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:467:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   467 |           fread(&cutT[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:470:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |             fread(&sc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:474:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |             fread(&kc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |           Q[j]    -= ( dQc - dQd + dQr );
BUILDSTDERR:       |                      ~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |           Q[j]    -= ( dQc - dQd + dQr );
BUILDSTDERR:       |                        ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:352:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:356:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |           fread(&A_att[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:357:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   357 |           fread(&B_rep[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:358:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:359:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   359 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&cut_r[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:391:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:400:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:404:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&power[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cutcc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:410:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |             fread(&kappa[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:411:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   411 |             fread(&epsilon[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:412:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |             fread(&powercc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:450:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:451:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   451 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&lj_type[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:389:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:390:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:421:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   421 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:422:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   422 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:423:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:478:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |           fread(&lj_type[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:479:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:480:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   480 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:481:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   481 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:515:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:516:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   516 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:517:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   517 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:518:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   518 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:519:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, int, FILE*, FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp:124:7: warning: 'cols' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |       if (j == cols) {
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp:160:18: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |       write_group(fp,i,atom,group,comm->me,comm->nprocs,world,screen,logfile);
BUILDSTDERR:       |       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp:148:30: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |           tags = read_section(fp,num);
BUILDSTDERR:       |                  ~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp:543:33: warning: unused variable 'id' [-Wunused-variable]
BUILDSTDERR:   543 |     std::vector<int>           &id = *(proxy->modify_atom_ids());
BUILDSTDERR:       |                                 ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::invoke_vector(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:434:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
BUILDSTDERR:   434 |         snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
BUILDSTDERR:       |                                                         ^~  ~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:22:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::options(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:561:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
BUILDSTDERR:   561 |           snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
BUILDSTDERR:       |                                                           ^~  ~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:22:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:216:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   216 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:218:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:219:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:225:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   225 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:235:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:237:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:435:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   437 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:438:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:444:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:472:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:474:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:19:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:35:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    35 | #define MAX(A,B) ((A) > (B) ? (A) : (B))
BUILDSTDERR:       |                   ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
BUILDSTDERR:   324 |         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
BUILDSTDERR:       |                        ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:549:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   549 |             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:567:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   567 |             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:583:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   583 |     for (int i = 1; i < nu_bin.size(); ++i)
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:23:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   208 |                                        onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   209 |                                        tag[j]-tagprev);
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:319:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   319 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:381:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:412:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   412 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:482:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   482 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   486 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:487:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   487 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:488:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   488 |           fread(&kappa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:489:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:519:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:520:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   520 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:521:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   521 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:365:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:367:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:368:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   368 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:374:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:387:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:389:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:708:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   708 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:709:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   709 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |         f[i][2] += delz*fpair;
BUILDSTDERR:       |                    ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:189:45: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
BUILDSTDERR:       |                                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   534 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1009 |     mixWtSite2old = fractionOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1014 |     mixWtSite2old = nMoleculesOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1015 |     mixWtSite2 = nMolecules2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |     mixWtSite2 = fraction2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:973:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   973 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:977:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   977 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1003:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1004:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1005:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1006:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1223:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1223 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1237:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1237 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1216:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1216 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1230:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1230 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1223:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1223 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1237:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1237 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1216:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1216 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1230:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1230 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:579:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   579 |     mixWtSite2 = nMolecules2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:574:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   574 |     mixWtSite2 = fraction2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:573:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   573 |     mixWtSite2old = fractionOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:578:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   578 |     mixWtSite2old = nMoleculesOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:363:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   363 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&polar[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:501:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |           fread(&thole[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:503:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   503 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   541 |     fread(&thole_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   228 |             if (drudetype[type[i]] != NOPOL_TYPE &&
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   229 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:193:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   222 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   227 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  224 make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   236 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:225:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:671:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   671 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   672 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:664:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   664 |     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
BUILDSTDERR:   665 |         di_closest != j)
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~                                                       
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:666:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   666 |       phicoul += factor_e * dcoul;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:666:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   663 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:658:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   658 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:315:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&polar[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&thole[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:351:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |     fread(&thole_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:276:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   276 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:281:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   310 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:311:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:315:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:363:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   363 |     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   300 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:304:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:375:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:376:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:841:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:848:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:849:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   884 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:885:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   885 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   886 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   888 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   889 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   890 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:891:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   891 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:892:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   892 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:982:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   982 |       (1.0/(denlj*denlj) - 1.0/denlj);
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:974:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   974 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:975:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   975 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:528:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:550:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
BUILDSTDERR:       |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: );
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:188:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               (1.0/(denlj*denlj) - 1.0/denlj);
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:181:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:182:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:384:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:392:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   433 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   434 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:435:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:500:23: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:495:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   495 |     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:143:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:969:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   969 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:972:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   972 |         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:996:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:997:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:998:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:77:10: warning: unused variable 'fraction' [-Wunused-variable]
BUILDSTDERR:    77 |   double fraction;
BUILDSTDERR:       |          ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:493:10: warning: unused variable 'fraction' [-Wunused-variable]
BUILDSTDERR:   493 |   double fraction,forcecoul,forcelj,phicoul,philj;
BUILDSTDERR:       |          ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:401:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:450:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:524:23: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   524 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:518:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   518 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:517:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:160:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:161:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:323:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:330:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:367:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:380:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:425:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:497:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:492:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:148:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:144:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:797:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   797 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   801 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   802 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:803:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:804:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   804 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:845:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:846:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:928:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   928 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:920:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   920 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:921:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   921 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:493:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   493 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:510:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   510 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
BUILDSTDERR:       |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:176:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR:   176 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:169:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:170:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:658:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   658 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   662 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   663 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:664:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:665:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   665 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:698:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   698 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   701 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   702 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:703:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   703 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:704:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:756:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:412:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   413 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:316:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:323:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:324:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:524:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   524 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   526 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:530:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:531:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:532:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:533:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   533 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:534:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   534 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:380:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:376:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   323 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:348:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   348 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:344:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   344 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:291:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   291 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:287:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp: In constructor 'LAMMPS_NS::MEAM::MEAM(LAMMPS_NS::Memory*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp:46:21: warning: operation on '((LAMMPS_NS::MEAM*)this)->LAMMPS_NS::MEAM::Ec_meam[i][j]' may be undefined [-Wsequence-point]
BUILDSTDERR:    46 |       Ec_meam[i][j] = re_meam[i][j] = alpha_meam[i][j] = delta_meam[i][j] = Ec_meam[i][j] = ebound_meam[i][j] = attrac_meam[i][j] = repuls_meam[i][j] = 0.0;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp:446:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   446 |     rhobar2 = rho02 / rho_bkgd2 * G2;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp:445:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   445 |     rhobar1 = rho01 / rho_bkgd1 * G1;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    63 |     for( int i = 0; i < parts.size(); ++i ){
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   394 |    double f,dp;
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   375 |  double alp = al,alm = al;
BUILDSTDERR:       |                  ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   158 |   double x0,x1,dx,dr;
BUILDSTDERR:       |                   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   203 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   246 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   306 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   343 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   109 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   123 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp:589:32: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   589 |     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:227:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   227 |        fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:228:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:229:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:230:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   259 |          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   260 |          fread(&a[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   263 |          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp:208:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   208 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp:209:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:234:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   234 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:235:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:235:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:238:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   238 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:240:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   240 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:241:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   241 |     fread(&C[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:242:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   242 |     fread(&N[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:180:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   180 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:181:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   181 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:184:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   184 |     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp:89:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    89 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:    90 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
BUILDSTDERR:       |                 ~~~~~~~~~                     
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:24: warning: unused variable 'mx' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                        ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:27: warning: unused variable 'itag' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                           ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:32: warning: unused variable 'jtag' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                                ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:10: warning: unused variable 'nbc' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |          ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:20: warning: unused variable 'tbl' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:30: warning: unused variable 'tbm' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |                              ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:600:13: warning: unused variable 'lmax_local' [-Wunused-variable]
BUILDSTDERR:   600 |   const int lmax_local = lmax;
BUILDSTDERR:       |             ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:609:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   609 |   double t0,t1;
BUILDSTDERR:       |          ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:609:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   609 |   double t0,t1;
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:618:18: warning: unused variable 'tsort' [-Wunused-variable]
BUILDSTDERR:   618 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
BUILDSTDERR:       |                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:618:42: warning: unused variable 'tlookup' [-Wunused-variable]
BUILDSTDERR:   618 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
BUILDSTDERR:       |                                          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:620:10: warning: unused variable 'ntsort' [-Wunused-variable]
BUILDSTDERR:   620 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
BUILDSTDERR:       |          ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:620:36: warning: unused variable 'ntlookup' [-Wunused-variable]
BUILDSTDERR:   620 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
BUILDSTDERR:       |                                    ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:1838:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  1838 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
BUILDSTDERR:       |         ^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:1838:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  1838 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
BUILDSTDERR:       |                         ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'Mmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: AKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:576:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
BUILDSTDERR:   576 | static void tr_count(const double * restrict A,
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:330:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:370:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:385:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |       fread(k[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:386:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |       fread(multiplicity[i],sizeof(int),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:387:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |       fread(shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp:332:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |       fread(a[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp:330:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:761:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   761 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:781:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   781 |       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:782:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   782 |       fread(phi_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:783:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   783 |       fread(phi_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:784:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   784 |       fread(phi_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:785:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   785 |       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:786:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   786 |       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:787:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   787 |       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:788:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   788 |       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:789:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   789 |       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:790:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   790 |       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp:506:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp:1026:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp:1027:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp:1019:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp:1020:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:2763:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2763 |   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
BUILDSTDERR:       |                      ^~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:39:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h:120:50: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |     bigint nbytes = ((bigint) sizeof(TYPE)) * n1*n2;
BUILDSTDERR:       |                                                  ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1798:7: note: 'dedup_size' was declared here
BUILDSTDERR:  1798 |   int dedup_size;
BUILDSTDERR:       |       ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1997:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
BUILDSTDERR:       |                                                                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1974:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1974 |     delete [] temp_limit_glove;
BUILDSTDERR:       |               ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:2032:54: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2032 |       if (stabilization_flag == 1) i_statted_tags[i] = 1;
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp:306:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   306 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp:307:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:123:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   123 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:124:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   124 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:128:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   128 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:129:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   129 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:133:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   133 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:134:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   134 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:138:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   138 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:139:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:143:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:144:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   144 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:148:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   148 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:149:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   149 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:153:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   153 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:154:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   154 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:158:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   158 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:159:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   159 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:163:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   163 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:164:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   164 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:168:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:169:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   169 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:173:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   173 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:174:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:178:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   178 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:179:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   179 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:183:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:184:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   184 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:188:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   188 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:189:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: mps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:193:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   193 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:194:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   194 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:198:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   198 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:199:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   199 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:203:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   203 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:204:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   204 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:208:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   208 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:209:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:213:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   213 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:214:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   214 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:218:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:219:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:223:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   223 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:224:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   224 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:228:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:229:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp:252:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   252 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp:253:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   222 |     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:462:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   462 |     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
BUILDSTDERR:       |                                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:458:22: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   458 |       params[curparam].numeta = nwords-1;
BUILDSTDERR:       |                      ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&rme[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&sigmae[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:316:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:317:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:318:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:304:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |           fread(&sigmae[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:305:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   305 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:308:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   308 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:344:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp:618:7: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   618 |   rc3 *= lconv;
BUILDSTDERR:       |   ~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp:613:6: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |   e2 *= econv;
BUILDSTDERR:       |   ~~~^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:308:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   308 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&hgauss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&rmh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&sigmah[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:344:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairExTeP::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairExTeP::SR_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairILPGrapheneHBN::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::ILP_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairKolmogorovCrespiFull::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::KC_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:307:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:311:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |           fread(&aparm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&bparm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:341:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:315:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:349:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:833:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   833 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:839:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |           fread(&shift[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:840:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   874 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   875 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   876 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:877:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   877 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:878:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   878 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:969:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   969 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   970 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   961 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:961:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   961 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:964:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   959 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:532:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   532 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:558:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:558:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   198 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   493 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   495 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   496 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   497 |           fread(&scale[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   526 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:11: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   622 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~
BUILDSTDERR:   625 |       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   622 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~~~~~~~~~~~~                                          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   617 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   615 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:13: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:13: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   617 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:13: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   615 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |           make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR:   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~
BUILDSTDERR:   280 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:444:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:450:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:480:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   480 |       fgets(line, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:644:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   644 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:647:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   647 |   fgets(line, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:653:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   653 |   fgets(line, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:660:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   660 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:664:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:311:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:317:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:318:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&rr[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&sscale,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&dscale,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:355:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:356:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:473:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:605:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   605 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:611:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   611 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:617:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   617 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:621:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   621 |                 fgets(line, MAXLINE, fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:277:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:284:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:312:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:699:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:704:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:705:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   705 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:733:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:734:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |     fread(&bptype,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:735:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |     fread(&btype,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:736:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   736 |     fread(&min,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:737:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   737 |     fread(&midpoint,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:738:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   738 |     fread(&exclude,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp: In member function 'void LAMMPS_NS::TemperNPT::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp:292:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   292 |         fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   293 |                me_universe,partner,swap,my_set_temp,partner_set_temp,
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   294 |                pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:388:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:389:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:391:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:396:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:338:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:180:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |         evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:165:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |     fpair = forcebuck6d * r32inv;
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:419:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |           fread(&buck6d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |           fread(&buck6d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |           fread(&buck6d3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |           fread(&buck6d4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&alpha_ij[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&vdwl_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:466:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:559:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   559 |     eng += phicoul;
BUILDSTDERR:       |     ~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:557:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   557 |     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:552:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   552 |     phibuck6d = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:188:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:452:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   452 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   456 |           fread(&buck6d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |           fread(&buck6d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   458 |           fread(&buck6d3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:459:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   459 |           fread(&buck6d4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:460:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   460 |           fread(&alpha_ij[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:461:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   495 |     fread(&vdwl_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   496 |     fread(&coul_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   497 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:499:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:500:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:501:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:42: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:207:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |             evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:36: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: coul_gauss_long.cpp:608:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |     phibuck6d = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp:191:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
BUILDSTDERR:   191 |   if (atom_index < data->nlocal) {
BUILDSTDERR:       |       ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp:205:11: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   205 |     if (j == atom_index)
BUILDSTDERR:       |         ~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp:825:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   825 |     indxr[i] = irow;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp:815:16: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   815 |     ipiv[icol] += 1;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp: In member function 'void ptm_voro::voronoicell_base::add_memory_vorder(vc_class&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:213:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   213 |         for(j=0;j<current_vertex_order;j++) p1[j]=mem[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:213:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   213 |         for(j=0;j<current_vertex_order;j++) p1[j]=mem[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |                                                          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:219:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   219 |         for(j=0;j<current_vertex_order;j++) p1[j]=mec[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:219:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   219 |         for(j=0;j<current_vertex_order;j++) p1[j]=mec[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |                                                          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp: In member function 'void ptm_voro::voronoicell_base::init_base(double, double, double, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:260:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   260 |         for(int i=0;i<current_vertex_order;i++) mec[i]=0;up=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:260:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   260 |         for(int i=0;i<current_vertex_order;i++) mec[i]=0;up=0;
BUILDSTDERR:       |                                                          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pertype_parameters(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp:219:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |       fscanf(pf,"%d %lg %lg %lg",&itype,&v1,&v2,&v3);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp:513:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   513 |     qeq_time = t_end - t_start;
BUILDSTDERR:       |                ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp:543:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |     data->timing.nbrs = t_end - t_start;
BUILDSTDERR:       |                         ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp:119:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:54:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    54 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:57:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    57 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:76:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    76 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:88:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    88 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:93:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    93 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:94:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    94 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:95:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    95 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:148:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   148 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:174:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:193:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   193 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:212:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   212 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:232:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   232 |       fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:317:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:327:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |       fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:479:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:484:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   484 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:540:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:545:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:598:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   598 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:603:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   603 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:669:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   669 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:679:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   679 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:40:16: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    40 |   for(i = 1; i < n; i++){
BUILDSTDERR:       |              ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:67:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    67 |   for( i = 2; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:71:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    71 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:75:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    75 |   for( i = 1; i < n-2; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:79:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    79 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:86:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    86 |   for( i = 1; i < n; ++i ){
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:117:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   117 |   for( i = 1; i < n; ++i )
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:121:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   121 |   for( i = 1; i < n; ++i )
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:125:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   125 |   for( i = 0; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:130:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   130 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:135:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   135 |   for( i = 1; i < n; ++i ){
BUILDSTDERR:       |               ~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:337:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   337 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:336:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:336:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:457:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   457 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:456:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   456 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:456:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   456 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:706:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   706 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:675:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   675 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:644:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   644 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:174:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |     if (strcmp(arg[iarg],"units") == 0) {
BUILDSTDERR:       |                        ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp:150:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:435:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |   fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:438:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:489:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:493:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   493 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:501:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:510:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:528:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:542:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:565:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:568:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:621:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   621 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:633:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   633 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:655:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   655 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:668:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   668 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:675:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   675 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:695:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   695 |     fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:698:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   698 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:708:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   708 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:719:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   719 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:722:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   722 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:727:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:735:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:738:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   738 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:745:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   745 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:748:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   748 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:758:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   758 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:761:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   761 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:766:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   766 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
/buildmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: dir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:792:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   792 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:795:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   795 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:803:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:813:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   813 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:1459:43: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1459 |             ddij = aCoeff*(r- rc-nang) *(2+bCoeff*(r-rc-nang))*exp(bCoeff*r);
BUILDSTDERR:       |                                         ~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:1458:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1458 |           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
BUILDSTDERR:       |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:2594:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2594 |     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
BUILDSTDERR:       |                                                             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:2813:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2813 |     dt = t_end - t_init;
BUILDSTDERR:       |     ~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:284:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:285:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   285 |     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:286:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:287:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp:229:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp:230:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp:183:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp:261:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp:262:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp:261:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp:262:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:525:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:532:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   566 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   567 |     fread(&truncw,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   570 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:571:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   571 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:679:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   679 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:695:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   695 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:679:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   679 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:670:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   670 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:670:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   670 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:673:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   673 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       phicoul = prefactor*erfc1;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:686:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   686 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:199:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Junmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: 2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |             ecoul = prefactor*erfc1;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:194:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   194 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:215:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   215 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:199:23: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:206:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:191:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:191:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:525:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:532:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   566 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   567 |     fread(&truncw,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   570 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:571:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   571 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:660:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
BUILDSTDERR:       |               ~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:694:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   694 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:677:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   677 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   678 |         offset[itype][jtype];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:668:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:671:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   671 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   666 |       phicoul = prefactor*erfc1;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:685:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   685 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             ecoul = prefactor*erfc1;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:191:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:213:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:196:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   197 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:204:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:188:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:188:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp:140:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp:140:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP13post_neighborEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP19pre_exchange_newtonEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP21pre_exchange_onesidedEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP22pre_exchange_no_newtonEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp:351:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   351 |     qeq_time = t_end - t_start;
BUILDSTDERR:       |                ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |       p = 2.0 - p;
BUILDSTDERR:       |       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |       p = 2.0 - p;
BUILDSTDERR:       |       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS15NPairFullBinOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here
BUILDSTDERR:    50 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairFullBinAtomonlyOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS17NPairFullMultiOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   121 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS20NPairFullBinGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   119 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   120 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS15NPairFullNsqOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalfBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   117 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   118 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS20NPairFullNsqGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS29NPairHalfBinAtomonlyNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfBinNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   126 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   127 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS24NPairHalfBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   124 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
BUILDSTDERR:    50 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS24NPairHalfMultiNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   124 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   125 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS21NPairHalfBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   150 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   151 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairHalfMultiNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   157 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   158 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfMultiNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   133 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   134 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalfNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
BUILDSTDERR:    53 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
BUILDSTDERR:    52 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
BUILDSTDERR:    52 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfNsqNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   121 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
BUILDSTDERR:    56 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
BUILDSTDERR:    55 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
BUILDSTDERR:    55 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS21NPairHalfNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   131 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   132 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfRespaBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   149 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
BUILDSTDERR:    56 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    58 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    95 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:192:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   192 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfRespaBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   194 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   195 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   212 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    94 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:238:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS29NPairHalfRespaBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   155 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   156 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    94 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfRespaNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   163 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   164 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
BUILDSTDERR:    58 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                    ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    60 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    99 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:205:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfRespaNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   145 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   146 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
BUILDSTDERR:    57 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                 ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    59 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    98 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:186:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS25NPairHalfSizeBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfSizeBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS28NPairHalfSizeBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfSizeNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS25NPairHalfSizeNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairHalffullNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalffullNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:148:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:148:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:181:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:181:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:152:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   152 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:152:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   152 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp:147:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               (sw3i[jtype] + sw4i[jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp:147:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               (sw3i[jtype] + sw4i[jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   254 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   259 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   254 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   259 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   461 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   461 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMPmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: itialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.h:22,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS13PairAIREBOOMP14REBO_neigh_thrEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:999:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   999 |             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
BUILDSTDERR:       |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   569 |           fpair = dC*dwij / rij;
BUILDSTDERR:       |                   ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:631:18: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   631 |           f[atomm][0] += fm[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:595:18: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   595 |           f[atomk][0] -= fi[0] + fj[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.h:22,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS11PairCombOMP15Short_neigh_thrEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   167 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   167 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:240:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:237:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:240:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:237:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
      |                  make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR:      ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:158:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   158 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:158:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   158 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:180:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:180:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR:   160 |                                       fxtmp,fytmp,fztmp,
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   161 |                                       delx,dely,delz,thr);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp:226:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   226 |     data->timing.nbrs = t_end - t_start;
BUILDSTDERR:       |                         ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:56:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    56 |   MPI_Comm comm;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'void InitializeOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, output_controls*, mpi_datatypes*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:134:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   134 |     snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   135 |     "System could not be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                      ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 58 and 1081 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:140:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   140 |     snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   141 |     "Sim_data couldn't be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                       ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 59 and 1082 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:153:41: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   153 |       snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                         ^~
BUILDSTDERR:   154 |       "System could not be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                        ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 58 and 1081 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:159:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   159 |     snprintf( errmsg, 512, "Error on: %s"
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   160 |     "Could not open output files! Terminating.", msg );
BUILDSTDERR:       |                                                  ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 52 and 1075 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:166:41: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   166 |       snprintf( errmsg, 512, "Error on: %s."
BUILDSTDERR:       |                                         ^~
BUILDSTDERR:   167 |       " Couldn't create lookup table! Terminating.", msg );
BUILDSTDERR:       |                                                      ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 55 and 1078 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |                 ecoul = prefactor*erfc;
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |                 ecoul = prefactor*erfc;
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   432 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
/builddir/build/BUILmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: D/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   432 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1335 |             f[jH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1331 |             f[jH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1304 |             f[iH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1300 |             f[iH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1597 |             f[jH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1593 |             f[jH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1566 |             f[iH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1562 |             f[iH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp:240:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp:242:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp:405:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp:230:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp:226:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   226 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:234:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   234 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:231:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   231 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:238:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp:236:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   248 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   249 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   255 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   256 |             offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   277 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp:239:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:40: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   241 |               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp:225:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp:221:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   221 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp:232:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   232 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   333 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   333 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:330:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   330 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:338:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp:235:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp:224:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp:232:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   232 |                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp:312:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   313 |                                       fforce[2],-r12[0],-r12[1],-r12[2]);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp:337:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   337 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],fforce[2],
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   338 |                                       -r12[0],-r12[1],-r12[2]);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp:223:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   273 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   277 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp:302:15: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   302 |       f[i][2] += delz*fpair;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp:298:24: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   298 |       if (eflag) evdwl *= factor_lj;
BUILDSTDERR:       |                  ~~~~~~^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   325 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   330 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   329 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   284 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   285 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   306 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   353 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   351 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   358 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   359 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:282:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:286:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                                     ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   417 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   418 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   274 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   275 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:281:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:281:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:283:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   322 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   305 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   310 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   314 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   315 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   280 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:34: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   280 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:376:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:377:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:378:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:379:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:404:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:426:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   311 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   321 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   313 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   313 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~
BUILDSTDERR:   388 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:71: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                           
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Linking CXX shared library liblammps_mpich.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -shared -Wl,-soname,liblammps_mpich.so.0 -o liblammps_mpich.so.0 @CMakeFiles/lammps.dir/objects1.rsp libmpi_stubs.a -lfftw3 -lpython3.7m -ljpeg -lpng -lz -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a libcolvars.a libh5md.a libgpu.a -lopenblas -lhdf5 -lsz -lz -ldl -lm -lOpenCL 
/usr/bin/cmake -E cmake_symlink_library liblammps_mpich.so.0 liblammps_mpich.so.0 liblammps_mpich.so
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Built target lammps
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target lmp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Linking CXX executable lmp_mpich
/usr/bin/cmake -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o  -o lmp_mpich -Wl,-rpath,/builddir/build/BUILD/lammps-stable_5Jun2019/mpich: liblammps_mpich.so.0 libmpi_stubs.a -lfftw3 -lpython3.7m -ljpeg -lpng -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Built target lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles 0
+ popd
~/build/BUILD/lammps-stable_5Jun2019
+ test -n mpich
+ module unload mpi/mpich-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-aarch64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ unset LD_LIBRARY_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ unset LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ unset MPI_BIN
BUILDSTDERR: ++ unset MPI_COMPILER
BUILDSTDERR: ++ unset MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ unset MPI_HOME
BUILDSTDERR: ++ unset MPI_INCLUDE
BUILDSTDERR: ++ unset MPI_LIB
BUILDSTDERR: ++ unset MPI_MAN
BUILDSTDERR: ++ unset MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ unset MPI_SUFFIX
BUILDSTDERR: ++ unset MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ unset _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ for mpi in '' mpich openmpi
+ test -n openmpi
+ module load mpi/openmpi-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-aarch64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-aarch64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-aarch64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-aarch64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-aarch64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-aarch64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-aarch64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-aarch64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
BUILDSTDERR: ++ export LD_LIBRARY_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ LOADEDMODULES=mpi/openmpi-aarch64
BUILDSTDERR: ++ export LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-aarch64:1;/usr/share/lmod/lmod/share/man:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ MPI_BIN=/usr/lib64/openmpi/bin
BUILDSTDERR: ++ export MPI_BIN
BUILDSTDERR: ++ MPI_COMPILER=openmpi-aarch64
BUILDSTDERR: ++ export MPI_COMPILER
BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ MPI_HOME=/usr/lib64/openmpi
BUILDSTDERR: ++ export MPI_HOME
BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/openmpi-aarch64
BUILDSTDERR: ++ export MPI_INCLUDE
BUILDSTDERR: ++ MPI_LIB=/usr/lib64/openmpi/lib
BUILDSTDERR: ++ export MPI_LIB
BUILDSTDERR: ++ MPI_MAN=/usr/share/man/openmpi-aarch64
BUILDSTDERR: ++ export MPI_MAN
BUILDSTDERR: ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ MPI_SUFFIX=_openmpi
BUILDSTDERR: ++ export MPI_SUFFIX
BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/openmpi-aarch64
BUILDSTDERR: ++ export MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64
BUILDSTDERR: ++ export _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ mkdir -p openmpi
~/build/BUILD/lammps-stable_5Jun2019/openmpi ~/build/BUILD/lammps-stable_5Jun2019
+ pushd openmpi
+ cp -al ../lammps-testing-827be7af84ca100d394ea1cf6d3bc49f6a8eef92 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
BUILDSTDERR: ++ test -n openmpi
BUILDSTDERR: ++ echo -DBUILD_MPI=OFF -DPKG_MPIIO=OFF
+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.7/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DLAMMPS_MACHINE=openmpi -DLAMMPS_LIB_SUFFIX=openmpi -DCMAKE_INSTALL_MANDIR=/usr/share/man/openmpi-aarch64 -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags' -DBUILD_MPI=OFF -DPKG_MPIIO=OFF -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 9.1.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- The C compiler identification is GNU 9.1.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Running test discovery...
-- Found 53 tests.
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.6.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found PythonLibs: /usr/lib64/libpython3.7m.so (found version "3.7.3") 
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.36") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib64/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.0.2
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.8.20")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") 
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/atom_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/beck_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/born_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/born_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/born_coul_long_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/born_coul_wolf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/born_coul_wolf_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/buck_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/buck_coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/buck_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/charmm_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/colloid_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/coul_debye_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/coul_dsf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/coul_long_cs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/device_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/dipole_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/dipole_lj_sf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/dipole_long_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/dpd_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/eam_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/ellipsoid_nbor_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/gauss_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj96_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_class2_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_coul_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_coul_debye_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_coul_msm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_cubic_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_dsf_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_expand_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_expand_coul_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_gromacs_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_sdk_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/lj_sdk_long_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/mie_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/morse_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/neighbor_cpu_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/neighbor_gpu_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/pppm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/soft_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/sw_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/table_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/ufm_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/vashishta_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/yukawa_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/yukawa_colloid_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/zbl_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/gayberne_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/gayberne_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/re_squared_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/re_squared_lj_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/tersoff_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/tersoff_zbl_cl.h...
BUILDSTDERR: Creating /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.3") 
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * OpenMP
 * FFTW3
 * LAPACK
 * Threads
 * BLAS
 * PythonLibs
 * JPEG
 * PNG
 * ZLIB
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      9.1.1
   C++ Flags        -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;LMP_USER_OMP
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  9.1.1
     C Flags  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp 
-- Linker flags:
   Executable      -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags
-- Shared libraries  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags
-- Link libraries: mpi_stubs;/usr/lib64/libfftw3.so;/usr/lib64/libpython3.7m.so;/usr/lib64/libjpeg.so;/usr/lib64/libpng.so;/usr/lib64/libz.so;/usr/lib64/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as FFT
-- Configuring done
-- Generating done
BUILDSTDERR: CMake Warning:
BUILDSTDERR:   Manually-specified variables were not used by the project:
BUILDSTDERR:     CMAKE_CXX_FLAGS_RELEASE
BUILDSTDERR:     CMAKE_C_FLAGS_RELEASE
BUILDSTDERR:     CMAKE_Fortran_FLAGS_RELEASE
BUILDSTDERR:     INCLUDE_INSTALL_DIR
BUILDSTDERR:     LIB_INSTALL_DIR
BUILDSTDERR:     LIB_SUFFIX
BUILDSTDERR:     SHARE_INSTALL_PREFIX
BUILDSTDERR:     SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi
+ /usr/bin/make -O -j4
/usr/bin/cmake -S/builddir/build/BUILD/lammps-stable_5Jun2019/cmake -B/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
Scanning dependencies of target mpi_stubs
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target msi2lmp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/poems.dir/DependInfo.cmake --color=
Scanning dependencies of target poems
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/colvars.dir/DependInfo.cmake --color=
Scanning dependencies of target colvars
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Linking C static library libmpi_stubs.a
/usr/bin/cmake -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1
/usr/bin/ar qc libmpi_stubs.a  CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS/mpi.c.o
/usr/bin/ranlib libmpi_stubs.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Built target mpi_stubs
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:5:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:847:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:856:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:864:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:873:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:881:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:979:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:987:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:994:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1001:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1008:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1026:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1035:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1039:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1048:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c:1052:5:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/atc.dir/DependInfo.cmake --color=
Scanning dependencies of target atc
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:5:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:479:3,
BUILDSTDERR:     inlined from 'MakeLists' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:46:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:500:7,
BUILDSTDERR:     inlined from 'MakeLists' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c:46:3:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c: In function 'ReadCarFile':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:101:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   101 |   fgets(line,MAX_LINE_LENGTH,CarF); /* Read header line */
BUILDSTDERR:       |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:108:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   108 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Comment line */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:109:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   109 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Date stamp */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:110:5: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   110 |     fscanf(CarF,"%*s %lf %lf %lf %lf %lf %lf %*s",
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   111 |            &pbc[0],&pbc[1],&pbc[2],&pbc[3],&pbc[4],&pbc[5]);
BUILDSTDERR:       |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:124:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   124 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Comment line */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:125:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   125 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Date Stamp */
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:146:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   146 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:180:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   180 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:189:7: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |       fscanf(CarF,"%s %lf %lf %lf %*s %d %s %s %lf",
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   190 |              atoms[k].name,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~
BUILDSTDERR:   191 |              &(atoms[k].x[0]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   192 |              &(atoms[k].x[1]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   193 |              &(atoms[k].x[2]),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   194 |              &(atoms[k].molecule),
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   195 |              atoms[k].potential,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   196 |              atoms[k].element,
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~
BUILDSTDERR:   197 |              &(atoms[k].q));
BUILDSTDERR:       |              ~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:209:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c:210:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   210 |     fgets(line,MAX_LINE_LENGTH,CarF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c: In function 'SearchAndFill':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:114:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   114 |     fgets(line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:119:3: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |   fgets(line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:121:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   121 |     fgets( line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:223:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   223 |     fgets( line, MAX_LINE_LENGTH, FrcF);
BUILDSTDERR:       |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /usr/include/string.h:494,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:13:
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:198:11:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In function 'strncpy',
BUILDSTDERR:     inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c:216:9:
BUILDSTDERR: /usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
BUILDSTDERR:   106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
BUILDSTDERR:       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Linking C executable msi2lmp
/usr/bin/cmake -E cmake_link_script CMakeFiles/msi2lmp.dir/link.txt --verbose=1
/usr/bin/cc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/CheckLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/GetParameters.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/InitializeItems.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/MakeLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadCarFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadFrcFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/ReadMdfFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/SearchAndFill.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/WriteDataFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/tools/msi2lmp/src/msi2lmp.c.o  -o msi2lmp -lm 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Built target msi2lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/cslib.dir/DependInfo.cmake --color=
Scanning dependencies of target cslib
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp:636:11: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   636 |   int64_t bigbytes,bigbytesround;
BUILDSTDERR:       |           ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:125:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   125 |   if (me == 0) fread(lengths,sizeof(int),2,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:132:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   132 |   if (me == 0) fread(header,sizeof(int),nheader,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:135:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   135 |   if (me == 0) fread(buf,1,nbuf,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp:60:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    60 |       fgets(port,MPI_MAX_PORT_NAME,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
BUILDSTDERR:    92 | static void MPI_Finalize() {}
BUILDSTDERR:       |             ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
BUILDSTDERR:    91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
BUILDSTDERR:    59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
BUILDSTDERR:       |             ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    56 | static void MPI_Comm_free(MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
BUILDSTDERR:    50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
BUILDSTDERR:       |             ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    49 | static void MPI_Close_port(const char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
BUILDSTDERR:    48 | static void MPI_Open_port(MPI_Info, char *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    46 | static void MPI_Comm_size(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
BUILDSTDERR:    45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
BUILDSTDERR:       |             ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
BUILDSTDERR:    44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
BUILDSTDERR:       |                 ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
BUILDSTDERR:    43 | static void MPI_Init(int *, char ***) {}
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Linking CXX static library libcsnompi.a
/usr/bin/cmake -P CMakeFiles/cslib.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/cslib.dir/link.txt --verbose=1
/usr/bin/ar qc libcsnompi.a  CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/cslib_wrap.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_file.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_one.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_mpi_two.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/ranlib libcsnompi.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Built target cslib
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/h5md.dir/DependInfo.cmake --color=
Scanning dependencies of target h5md
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building C object CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o   -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Linking C static library libh5md.a
/usr/bin/cmake -P CMakeFiles/h5md.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/h5md.dir/link.txt --verbose=1
/usr/bin/ar qc libh5md.a  CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/src/ch5md.c.o
/usr/bin/ranlib libh5md.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Built target h5md
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:35,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp:25:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Built target ocl_get_devices
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Scanning dependencies of target gpu
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   182 |     if (_ef_atom)
BUILDSTDERR:       |        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   196 |       if (_vf_atom)
BUILDSTDERR:       |          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   231 |     if (_ef_atom)
BUILDSTDERR:       |        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   250 |       if (_vf_atom)
BUILDSTDERR:       |          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:313:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
BUILDSTDERR:   224 |   int ii, vstart=0, iend=_inum;
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  0%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp: In instantiation of 'void LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, int, double**, int*, int*, int*, int**, bool, bool, bool, bool, int&, double, bool&) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:396:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:269:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   269 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp: In instantiation of 'int** LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, double**, int*, double*, double*, tagint*, int**, tagint**, bool, bool, bool, bool, int&, int**, int**, double, bool&) [with numtyp = float; acctyp = double; tagint = int]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:396:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp:338:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   338 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::CHARMMLong<numtyp, acctyp>::init(int, double, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double, double, double*, double, double, double, double, double**, double**, bool) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp:79:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp> host_write(h_size*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Colloid<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, double**, double**, double**, double**, double**, double**, double**, int**, int, int, int, int, double, double, FILE*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview_form +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp:97:18: note: '*((void*)& dview_form +24)' was declared here
BUILDSTDERR:    97 |   UCL_H_Vec<int> dview_form(lj_types*lj_types,*(this->ucl_device),
BUILDSTDERR:       |                  ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp: In member function 'int LAMMPS_AL::CoulDSF<numtyp, acctyp>::init(int, int, int, int, int, double, double, FILE*, double, double*, double, double, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp:83:5: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    83 |     host_write[i]=host_special_coul[i];
BUILDSTDERR:       |     ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:533:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   448 |   int eflag, vflag;
BUILDSTDERR:       |              ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'void LAMMPS_AL::GayBerne<numtyp, acctyp>::clear() [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:587:37: warning: '*((void*)& err_flag +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   587 |     CL_SAFE_CALL(clEnqueueReadBuffer(cq,src.cbegin(),block,src_offset,n,
BUILDSTDERR:       |                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp:155:18: note: '*((void*)& err_flag +24)' was declared here
BUILDSTDERR:   155 |   UCL_H_Vec<int> err_flag(1,*(this->ucl_device));
BUILDSTDERR:       |                  ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::LJClass2Long<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp:75:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    75 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::LJDSF<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp:79:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::CGCMMLong<numtyp, acctyp>::init(int, double**, int**, double**, double**, double**, double**, double**, double*, int, int, int, int, double, double, FILE*, double**, double, double*, double, double) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp:76:21: note: '*((void*)& host_write +24)' was declared here
BUILDSTDERR:    76 |   UCL_H_Vec<numtyp> host_write(lj_types*lj_types*32,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:35,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_kernel.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_kernel.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_texture.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.h:20,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:27:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'void LAMMPS_AL::RESquared<numtyp, acctyp>::clear() [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:587:37: warning: '*((void*)& err_flag +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   587 |     CL_SAFE_CALL(clEnqueueReadBuffer(cq,src.cbegin(),block,src_offset,n,
BUILDSTDERR:       |                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:144:18: note: '*((void*)& err_flag +24)' was declared here
BUILDSTDERR:   144 |   UCL_H_Vec<int> err_flag(1,*(this->ucl_device));
BUILDSTDERR:       |                  ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp: In member function 'int LAMMPS_AL::RESquared<numtyp, acctyp>::init(int, double**, double**, double**, double**, double**, int**, double**, double**, double**, double**, double**, const double*, int, int, int, int, double, double, FILE*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp:105:3: warning: '*((void*)& host_write +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   105 |   host_write[1]=static_cast<numtyp>(host_special_lj[1]);
BUILDSTDERR:       |   ^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    91 |     for (int i = 0; i < node.getChildren().size(); i++) {
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   113 |             for (int i = 1; i < args.size(); i++)
BUILDSTDERR:       |                             ~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<double*, double*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   170 |     for (int i = 0; i < variablesToCopy.size(); i++)
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::Operation*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   175 |     for (int step = 0; step < operation.size(); step++) {
BUILDSTDERR:       |                        ~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   180 |             for (int i = 0; i < args.size(); i++)
BUILDSTDERR:       |                             ~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    40 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    47 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    53 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    58 |     if (operation->getNumArguments() != children.size())
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::SW<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp:75:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    75 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Table<numtyp, acctyp>::init(int, double**, double***, double**, double*, int, int, int, int, double, double, FILE*, int, int, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& host_write_int +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp:90:18: note: '*((void*)& host_write_int +24)' was declared here
BUILDSTDERR:    90 |   UCL_H_Vec<int> host_write_int(lj_types*lj_types,*(this->ucl_device),
BUILDSTDERR:       |                  ^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:181:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   181 |             if (pos != tokens.size())
BUILDSTDERR:       |                 ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:190:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   190 |         if (pos != tokens.size())
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::__cxx11::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:201:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   201 |     if (pos == tokens.size())
BUILDSTDERR:       |         ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:227:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   227 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp:241:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   241 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp: In instantiation of 'void LAMMPS_AL::Tersoff<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:331:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:261:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   261 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Tersoff<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:159:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   159 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp:83:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    83 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Linking CXX static library libcolvars.a
/usr/bin/cmake -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc libcolvars.a  CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/colvarvalue.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/ranlib libcolvars.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Built target colvars
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
Scanning dependencies of target gitversion
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles" -P /builddir/build/BUILD/lammps-stable_5Jun2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Built target gitversion
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp: In instantiation of 'void LAMMPS_AL::TersoffMod<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:331:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:261:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   261 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::TersoffMod<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:159:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   159 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp:83:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    83 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
BUILDSTDERR:    36 |  int data;
BUILDSTDERR:       |      ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
BUILDSTDERR:    32 |  TreeNode *left;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
BUILDSTDERR:    22 | TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
BUILDSTDERR:       | ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp: In instantiation of 'void LAMMPS_AL::TersoffZBL<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:357:16:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:286:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   286 |   if (nall*this->_max_nbors > _zetaij.cols()) {
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::TersoffZBL<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, double, double, double, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& cutsq_view +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:179:21: note: '*((void*)& cutsq_view +24)' was declared here
BUILDSTDERR:   179 |   UCL_H_Vec<numtyp> cutsq_view(nparams,*(this->ucl_device),
BUILDSTDERR:       |                     ^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp:90:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    90 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 13%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp:26:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.h:21,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In member function 'int LAMMPS_AL::Vashishta<numtyp, acctyp>::init(int, int, int, int, double, double, FILE*, int*, int, int***, int, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*, const double*) [with numtyp = float; acctyp = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:639:38: warning: '*((void*)& dview +24)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp:79:22: note: '*((void*)& dview +24)' was declared here
BUILDSTDERR:    79 |   UCL_H_Vec<numtyp4> dview(nparams,*(this->ucl_device),
BUILDSTDERR:       |                      ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 15%] Linking CXX static library libpoems.a
/usr/bin/cmake -P CMakeFiles/poems.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/poems.dir/link.txt --verbose=1
/usr/bin/ar qc libpoems.a  CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/body23joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatmap.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/colmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/eulerparameters.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fastmatrixops.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/fixedpoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/freebodyjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/inertialframe.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat3x3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat4x4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mat6x6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/matrixfun.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/mixedjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/norm.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onfunctions.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/onsolver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/particle.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemsobject.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/poemstreenode.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/point.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/prismaticjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/revolutejoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rigidbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/rowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/solver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/sphericaljoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/system.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/vect6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualcolmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/virtualrowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems/workspace.cpp.o
/usr/bin/ranlib libpoems.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 15%] Built target poems
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /usr/include/CL/cl.h:32,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_macros.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:27,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
BUILDSTDERR:    34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
BUILDSTDERR:       |                                                                                                        ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_timer.h:28,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   376 |   cl_context_properties props[3];
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_mat.h:29,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.h:19,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp:20:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   107 |   if (error_flag != CL_SUCCESS)
BUILDSTDERR:       |   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
BUILDSTDERR:   109 |     *mat.host_ptr() = (typename mat_type::data_type*)
BUILDSTDERR:       |     ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 15%] Linking CXX static library libgpu.a
/usr/bin/cmake -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1
/usr/bin/ar qc libgpu.a  CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_beck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_buck_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_charmm_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_cs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_device.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_dpd_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_alloy_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_eam_fs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gauss_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_gayberne_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj96_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_class2_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_cubic_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_dsf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_expand_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_gromacs_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_mie_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_morse_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_neighbor_shared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_pppm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_re_squared_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_soft_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_sw_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_table_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_mod_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_ufm_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/ranlib libgpu.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 15%] Built target gpu
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Array.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Array2D.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp:164:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   164 |         fread(&myVal,sizeof(double),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.h:8,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.h:9,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixDef.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:3,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseVector.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
BUILDSTDERR:   303 |   static std::string to_cap(const std::string &s) {
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.h:11,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix.h:297,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:10,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.h:25,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantity.h:7,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.h:11,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp:2:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |     val[i] = next.v;
BUILDSTDERR:       |     ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.h:6,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp:1:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Linking CXX static library libatc.a
/usr/bin/cmake -P CMakeFiles/atc.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1
/usr/bin/ar qc libatc.a  CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/ranlib libatc.a
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Built target atc
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/lammps.dir/DependInfo.cmake --color=
Scanning dependencies of target lammps
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_zero.cpp:132:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   132 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:337:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:346:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/angle_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_map.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_atomic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_charge.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_hybrid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.cpp:979:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   979 |       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_line.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/balance.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom_vec_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/citeme.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_zero.cpp:130:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   130 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:338:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:347:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/bond_hybrid.cpp:350:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/change_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_brick.cpp:714:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   714 |   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
BUILDSTDERR:       |                            ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_aggregate_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_adf.cpp:312:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |   int x0;
BUILDSTDERR:       |       ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp:1449:16: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1449 |   int index=-1,dir;
BUILDSTDERR:       |                ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/comm_tiled.cpp:818:34: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   818 |         for (i = atom->nlocal; i < nlast; i++) {
BUILDSTDERR:       |                                ~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |           ptr[n] = 180.0*theta/MY_PI;
BUILDSTDERR:       |                    ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:308:60: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |           ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_angmom_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:400:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             ptr[n] = engrot;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:397:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |             ptr[n] = engvib;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:403:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   403 |             ptr[n] = engtrans;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:391:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |             ptr[n] = engpot;
BUILDSTDERR:       |             ~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:231:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   231 |   double inertia,omegasq;
BUILDSTDERR:       |                  ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:409:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ptr[n] = vvib;
BUILDSTDERR:       |             ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:412:62: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |             ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |         btype = onemols[imol]->bond_type[iatom][i];
BUILDSTDERR:       |                                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |         btype = onemols[imol]->bond_type[iatom][i];
BUILDSTDERR:       |                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_centro_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_spread_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cluster_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_cna_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_contact_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_com_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1512:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1512 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1513:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1513 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1512:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1512 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1586:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1586 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1587:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1587 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1586:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1586 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1691:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1691 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1692:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1692 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
BUILDSTDERR:       |                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:1691:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1691 |       if (xremap < boxlo[idim]) xremap += prd[idim];
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_chunk_atom.cpp:416:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |         if (minflag[idim] == COORD) minvalue[idim] *= scale;
BUILDSTDERR:       |                                     ~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_coord_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dipole_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp:320:60: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |           ptr[n] = input->variable->compute_equal(vvar[ivar]);
BUILDSTDERR:       |                                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_dihedral_local.cpp:244:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_displace_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_erotate_sphere_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_fragment_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_group_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp:513:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   513 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
BUILDSTDERR:       |                           ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_global_atom.cpp:444:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   444 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
BUILDSTDERR:       |                           ~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_gyration_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_heat_flux.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_hexorder_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
BUILDSTDERR:       |                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   218 |           cbuf[n] = 180.0*acos(c)/MY_PI;
BUILDSTDERR:       |                 ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_inertia_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_ke_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_msd_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_omega_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_orientorder_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pair_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pe_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp:197:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   198 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
BUILDSTDERR:       |                 ~~~~~~~~~                     
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_rdf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_property_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_reduce_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_slice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_stress_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_com.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_deform.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_ramp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_profile.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_temp_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vacf.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_torque_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/compute_vcm_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:668:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
BUILDSTDERR:       |                                                ~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:668:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
BUILDSTDERR:       |                        ~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   229 |     ranmol = new RanMars(lmp,molseed+comm->me);
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_atoms.cpp:119:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   119 |     if (strcmp(arg[iarg],"basis") == 0) {
BUILDSTDERR:       |                        ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   129 |   } else if (style == SANGLE) {
BUILDSTDERR:       |          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/delete_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_zero.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:322:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:331:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dihedral_hybrid.cpp:334:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/displace_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_cfg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:516:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   516 |     atom->v = vhold;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:515:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   515 |     atom->x = xhold;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump.cpp:517:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     atom->image = imagehold;
BUILDSTDERR:       |     ~~~~~~~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_dcd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:855:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:855:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:756:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/domain.cpp:756:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
BUILDSTDERR:       |                         ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_movie.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1033:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1033 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1027:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1027 |             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
BUILDSTDERR:       |                                                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
BUILDSTDERR:       |                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:893:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   893 |           image->draw_sphere(bodyarray[k],color,bodyarray[k][3]);
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_image.cpp:1033:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1033 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_xyz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/error.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:1032:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |                 (*ptr != 0.0 && value != 0.0))
BUILDSTDERR:       |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:529:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |     double *values;
BUILDSTDERR:       |             ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/dump_custom.cpp:528:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |     double *ptr,*ptrhold;
BUILDSTDERR:       |                  ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp:777:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   777 |     tmp = MAX(nneigh,nneighfull);
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/finish.cpp:777:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_adapt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_addforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp:537:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   537 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_correlate.cpp:482:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   482 |     values[lastindex][i] = scalar;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo_weight.cpp:499:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_chunk.cpp:1057:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1057 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_histo.cpp:854:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_aveforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_balance.cpp:299:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   299 |   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:700:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:911:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   911 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:968:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   968 |         else if (lengthone != length)
BUILDSTDERR:       |              ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   629 |     else vector[i] += scalar;
BUILDSTDERR:       |          ~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |         if (value == -1)
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_controller.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_box_relax.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_drag.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_deform.cpp:151:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   151 |         set[index].style = FINAL;
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_enforce2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_dt_reset.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_external.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_gravity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_halt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_heat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_lineforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_indent.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_minimize.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_momentum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:844:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   844 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:814:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   814 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_move.cpp:784:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   784 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::post_neighbor()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_onesided()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_no_newton()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::pre_exchange_newton()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual int LAMMPS_NS::FixNeighHistory::unpack_exchange(int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::FixNeighHistory::allocate_pages()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixNeighHistory::unpack_restart(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nph_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_npt_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_langevin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_noforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_limit.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nve_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_nvt_sllod.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_planeforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_print.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_press_berendsen.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_read_restart.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_property_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_recenter.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_setforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_restrain.cpp:566:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   566 |   df1 = df1*cos_target[m] - ddf1*sin_target[m];
BUILDSTDERR:       |                             ~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_chunk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_rg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_spring_self.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_berendsen.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csld.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_csvr.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_temp_rescale.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |     extarray = finalvalue;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |     else if (value != finalvalue)
BUILDSTDERR:       |          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   457 |       if (imageflag)
BUILDSTDERR:       |       ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_store_state.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_viscous.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall.cpp:65:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    65 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj1043.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj126.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_lj93.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_reflect.cpp:56:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    56 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/hashlittle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_wall_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_group.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/image.cpp:518:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   518 |           bool xin = ((surface[0]+tdir[0]) >= -radius) &&
BUILDSTDERR:       |                       ~~~~~~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_neigh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:739:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   739 |   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:751:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   751 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/group.cpp:755:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   755 |       if (me == 0) fread(names[i],sizeof(char),n,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_store.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_time.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/imbalance_var.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:319:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:328:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_hybrid.cpp:331:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/improper_zero.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/integrate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/info.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/irregular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/kspace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/input.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lattice.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lmppython.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/library.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:7: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:33: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |                      ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:260:20: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
BUILDSTDERR:       |         ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   271 |   p[3] = c_phi*p[3] + s_phi*kp[3];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |   p[2] = c_phi*p[2] + s_phi*kp[2];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |   p[1] = c_phi*p[1] + s_phi*kp[1];
BUILDSTDERR:       |                       ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |   p[0] = c_phi*p[0] + s_phi*kp[0];
BUILDSTDERR:       |                       ~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/math_special.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_fire.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_linesearch.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_hftn.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_quickmin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/min_sd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/minimize.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/molecule.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nbin_standard.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.cpp:14:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::NeighList::setup_pages(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_request.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1675 |     if (newtflag) {
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1783 |     if (newtflag) {
BUILDSTDERR:       |     ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_copy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   103 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_atomonly.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBinAtomonly::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   109 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   110 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   108 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   110 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   111 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   105 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   103 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    89 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   103 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   104 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   102 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_atomonly_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinAtomonlyNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   107 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   108 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   116 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   147 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   105 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   106 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   104 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    90 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   115 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   113 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newtoff_ghost.cpp:99:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    99 |         if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                              ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   121 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    91 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:149:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   131 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   132 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:149:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    72 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:195:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   177 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   178 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:150:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    71 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:157:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    72 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1363 |   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1380:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1380 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1383:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1383 |     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1386:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1386 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1389:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1389 |     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1392:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1392 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1395:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1395 |     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1405:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1405 |   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1422:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1422 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1425:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1425 |     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1428:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1428 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1431:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1431 |     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/modify.cpp:1434:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1434 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   129 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   130 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   128 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:145:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    76 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:165:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   149 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:165:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    78 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   117 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newtoff.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_bin_newton_tri.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtonTri::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newtoff.cpp:79:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    79 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |       if (includegroup && !(mask[j] & bitmask)) continue;
BUILDSTDERR:       |                            ~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newtoff.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalffullNewtoff::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_halffull_newton.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalffullNewton::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkip::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:153:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   153 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:162:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |     index = 0;
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    64 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSize::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2on::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/npair_skip_size_off2on_oneside.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2onOneside::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_bin_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_ghost_bin_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_2d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_full_multi_3d.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_2d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_bin_3d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_ghost_bin_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_2d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newtoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/nstencil_half_multi_3d_newton_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_angle_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_bond_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_dihedral_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_all.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_partial.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ntopo_improper_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:281:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:285:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   285 |           fread(&AA[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |           fread(&BB[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&aa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&beta[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_beck.cpp:321:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:1678:17: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1678 |       e = single(0,1,itype,jtype,rsq,1.0,1.0,f);
BUILDSTDERR:       |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:1688:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1688 |   if (atom->q) atom->q = q_hold;
BUILDSTDERR:       |                ~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:389:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |         ftable[i] = qqrd2e/r * fgamma;
BUILDSTDERR:       |                     ~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:390:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |         etable[i] = qqrd2e/r * egamma;
BUILDSTDERR:       |                     ~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:39: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
BUILDSTDERR:       |                                ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:39: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.cpp:392:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
BUILDSTDERR:       |                                         ~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:333:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:337:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:338:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:339:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   339 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:340:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:341:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:342:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   342 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:373:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:374:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born.cpp:376:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/output.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:365:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:369:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   369 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:374:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:410:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:488:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   488 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:489:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   488 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   489 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:483:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   483 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:484:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   484 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:483:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   483 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:167:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:163:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   163 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:164:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:168:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_dsf.cpp:163:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   163 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:364:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:368:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   368 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:369:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   369 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:486:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   486 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:487:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   486 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   487 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:481:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:482:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   482 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:481:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:170:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:167:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_born_coul_wolf.cpp:171:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:311:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:317:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:318:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:348:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:349:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck.cpp:350:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:367:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:374:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:375:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:408:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:409:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:410:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:468:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:468:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_buck_coul_cut.cpp:147:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:152:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   152 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:153:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   153 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:154:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   154 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_debye.cpp:155:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   155 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:248:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   248 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:251:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:275:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   275 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:276:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   276 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_cut.cpp:277:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:256:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   256 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:281:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_dsf.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:253:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:277:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:278:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   278 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_wolf.cpp:317:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |     phicoul = prefactor * (erfcc-e_shift*r);
BUILDSTDERR:       |                           ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_coul_streitz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:318:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:323:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:324:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd.cpp:355:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:284:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&b[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:317:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:318:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_gauss.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:233:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   233 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:237:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:238:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   238 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:266:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   266 |     fread(&t_start,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:267:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   267 |     fread(&t_stop,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:268:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   268 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:269:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   269 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_dpd_tstat.cpp:270:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   270 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    47 |   int multflag;
BUILDSTDERR:       |       ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:610:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   610 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:614:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:615:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   615 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:616:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   616 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:645:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   645 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:646:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   646 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:647:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   647 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:648:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   648 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:392:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   392 |             fpair = factor_lj*forcelj*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj96_cut.cpp:395:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   395 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   396 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:674:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   674 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:697:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   697 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:700:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:706:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   706 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:710:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   710 |       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:713:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   713 |     if (me == 0) fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:717:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   717 |       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   399 |   int multflag;
BUILDSTDERR:       |       ^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:316:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:348:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   348 |       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:345:46: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:133:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cubic.cpp:130:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:173:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   173 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:174:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:175:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:176:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   176 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:177:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   177 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:215:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   215 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   216 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:211:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:109:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_debye.cpp:112:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:356:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:361:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:362:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:363:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:394:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   394 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:396:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:452:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   453 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_cut.cpp:139:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   139 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   140 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:604:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   604 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:608:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   608 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:609:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:610:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   610 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:639:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   639 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:640:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   640 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:641:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   641 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:642:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   642 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:386:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             fpair = factor_lj*forcelj*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut.cpp:389:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   390 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:379:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:383:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&alpha,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:465:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   465 |     eng += phicoul;
BUILDSTDERR:       |     ~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:464:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:464:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:458:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   458 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   459 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:167:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   162 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_dsf.cpp:167:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:375:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:379:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:380:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:381:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:412:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |     fread(&alf,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:413:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   413 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:414:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   414 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:171:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_cut_coul_wolf.cpp:164:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   165 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:327:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:331:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:332:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:333:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |           fread(&shift[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:334:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:364:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:365:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_expand.cpp:366:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:344:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:348:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:349:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:350:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:351:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:381:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:382:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:383:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:438:44: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs.cpp:140:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:382:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&cut_coul_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:421:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   421 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:503:30: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   503 |         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:500:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |     philj += ljsw5[itype][jtype];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:492:29: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         tc*tc*tc * (coulsw3 + coulsw4*tc);
BUILDSTDERR:       |                    ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:159:49: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
BUILDSTDERR:       |                                        ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:169:38: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:166:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_gromacs_coul_gromacs.cpp:165:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                                              ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:355:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:359:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   359 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:361:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:362:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:394:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   394 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:453:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   453 |       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:451:33: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   451 |     philj = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:448:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   448 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   449 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:143:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:141:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   141 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth.cpp:138:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   138 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   139 |                              lj4[itype][jtype]) - offset[itype][jtype];
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:286:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:290:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:291:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   291 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:292:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   292 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_lj_smooth_linear.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:268:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   268 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:272:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   272 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:273:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   273 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:274:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   274 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:275:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   275 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:303:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   303 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:304:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_morse.cpp:305:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   305 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:631:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   631 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:635:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   635 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:636:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   636 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:637:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   637 |           fread(&gamR[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:638:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   638 |           fread(&gamA[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:639:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   639 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:670:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   670 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:671:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   671 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:672:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   672 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:673:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   673 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   394 |             fpair = factor_mie*forcemie*r2inv;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_mie_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   398 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:249:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:253:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |           fread(&prefactor[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:254:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   254 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_soft.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:289:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:293:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   293 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:294:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   294 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:295:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   295 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:324:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_ufm.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:978:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   978 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:979:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   979 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:980:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   980 |     fread(&ewaldflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:981:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   981 |     fread(&pppmflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:982:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   982 |     fread(&msmflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:983:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |     fread(&dispersionflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:984:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |     fread(&tip4pflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1043:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1043 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
BUILDSTDERR:       |                                   ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1043:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1043 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
BUILDSTDERR:       |        ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:1040:9: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1040 |     phi = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |     ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_table.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:255:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   255 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:259:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   259 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:260:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   260 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:287:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |     fread(&kappa,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:288:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:289:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_yukawa.cpp:290:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   290 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp:141:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   141 |               (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zbl.cpp:289:26: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   289 |       (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:175:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:179:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   179 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:204:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   204 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair_zero.cpp:205:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   205 |     fread(&coeffflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/random_mars.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/random_park.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:687:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   687 |   vec[5] = kme + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:686:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   686 |   vec[4] = jme + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:685:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   685 |   vec[3] = ime + 1;
BUILDSTDERR:       |            ~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/procmap.cpp:881:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   881 |   return index;
BUILDSTDERR:       |          ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:559:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   559 |       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:487:18: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   487 |     else lo[dim] = valuehalf;
BUILDSTDERR:       |          ~~~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/rcb.cpp:1051:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1051 |       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:307:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |       fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:311:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       fread(&procsperfile,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:314:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |         fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:318:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |         fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:324:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |         fread(buf,sizeof(double),n,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:384:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |       fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:387:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |       fread(&procsperfile,sizeof(int),1,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:396:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |         fread(&flag,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:400:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |         fread(&n,sizeof(int),1,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:406:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |         fread(buf,sizeof(double),n,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1106:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1106 |           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1288:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1288 |   if (me == 0) fread(value,sizeof(char),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1300:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1300 |   if (me == 0) fread(vec,sizeof(int),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_restart.cpp:1311:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1311 |   if (me == 0) fread(vec,sizeof(double),n,fp);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/read_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_xyz.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reader_native.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:191:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |       contact[i].delz = xorig[2] - zs;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:190:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |       contact[i].dely = xorig[1] - ys;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region.cpp:189:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |       contact[i].delx = xorig[0] - xs;
BUILDSTDERR:       |                         ~~~~~~~~~^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   335 |   add_contact(0,x,xp,yp,zp);
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_block.cpp:335:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cone.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_deprecated.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   717 |     add_contact(0,x,xp,yp,zp);
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_cylinder.cpp:717:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_plane.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_intersect.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_prism.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_sphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/region_union.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/rerun.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/reset_ids.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/replicate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp:173:35: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |     if (stopflag) update->endstep = stop;
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/run.cpp:171:38: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |     if (startflag) update->beginstep = start;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~~~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/respa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/set.cpp:1152:19: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1152 |           quat[1] = 0.0;
BUILDSTDERR:       |           ~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/special.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/timer.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/thermo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/universe.cpp:149:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |   MPI_Comm_split(uorig,0,key,&uworld);
BUILDSTDERR:       |   ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/utils.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:547:48: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |       if (vfield) input->variable->compute_atom(zvar,igroup,&vfield[0][2],3,0);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:540:61: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |     if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:535:61: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |     if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:527:31: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   527 |           if (zstyle) v[i][2] += vz;
BUILDSTDERR:       |                       ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:526:31: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   526 |           if (ystyle) v[i][1] += vy;
BUILDSTDERR:       |                       ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:521:31: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   521 |           if (xstyle) v[i][0] = vx;
BUILDSTDERR:       |                       ~~~~~~~~^~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:34:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h:173:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |     sfree(array);
BUILDSTDERR:       |     ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/velocity.cpp:169:12: note: 'vhold' was declared here
BUILDSTDERR:   169 |   double **vhold;
BUILDSTDERR:       |            ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/update.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_coeff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/verlet.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_dump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:684:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   684 |       fscanf(fp,"%d",&nextindex);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3929:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3929 |     newtree->value = value;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4703:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4703 |   int op,opprevious,flag1,flag2;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4193:30: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4193 |     if (method == AVE) value /= nvec;
BUILDSTDERR:       |                        ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:4007:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4007 |     int index,nvec,nstride;
BUILDSTDERR:       |                    ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:1185:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1185 |   int op,opprevious;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:1007:53: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1007 |         if (mask[i] & groupbit) result[m] = vstore[i];
BUILDSTDERR:       |                                             ~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3487:38: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3487 |       argstack[nargstack++] = value1 + value2*randomequal->gaussian();
BUILDSTDERR:       |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/variable.cpp:3382:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3382 |       argstack[nargstack++] = sqrt(value1);
BUILDSTDERR:       |                               ~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   139 |         inertia[0] = tbonus[tri[i]].inertia[0];
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |         length = lbonus[line[i]].length;
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   109 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/write_restart.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/compute_temp_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nh_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nph_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_npt_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    94 |       shape = bonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                 ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_line.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nvt_asphere.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/fix_nve_tri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_line_lj.cpp:306:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   306 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   307 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:466:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:469:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:473:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:477:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:478:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:479:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:511:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   511 |     fread(&gamma,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&upsilon,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:515:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:516:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   516 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:729:30: warning: '*((void*)& dchi2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   729 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:728:30: warning: '*((void*)& dchi2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   728 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:727:30: warning: 'dchi2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   727 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:729:45: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   729 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:728:45: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   728 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_gayberne.cpp:727:45: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   727 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:444:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
BUILDSTDERR:       |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:447:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:451:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   451 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:455:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   455 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:456:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   456 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:457:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:485:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   485 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_resquared.cpp:486:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   486 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE/pair_tri_lj.cpp:380:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   381 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_nparticle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polygon.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_body_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |   int nedges,nentries;
BUILDSTDERR:       |       ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/compute_temp_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nph_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nh_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_npt_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nvt_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_nve_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp:340:26: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   340 |       vertex_against_wall(i, wall_pos, x, f, torque, side,
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   341 |                           contact_list, num_contacts, facc);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polygon.cpp:303:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   303 |         if (delr > eradi) dz = cylradius;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/fix_wall_body_polyhedron.cpp:335:28: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   335 |         sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque);
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_nparticle.cpp:326:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   327 |                            evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.cpp:899:6: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without
BUILDSTDERR:   899 | void LAMMPS::init_pkg_lists()
BUILDSTDERR:       |      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:375:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:376:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:377:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:378:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:380:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:381:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:382:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:385:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/angle_class2.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:245:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   245 |       int interact, num_contacts, done;
BUILDSTDERR:       |           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:109:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   109 |   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
BUILDSTDERR:       |                                                   ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:602:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   602 |   double eradi,eradj,rradi,rradj;
BUILDSTDERR:       |          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:602:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   602 |   double eradi,eradj,rradi,rradj;
BUILDSTDERR:       |                ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:604:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   604 |   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
BUILDSTDERR:       |                                ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:604:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   604 |   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
BUILDSTDERR:       |                                      ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:707:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   707 |   int ni, npi, ifirst, nei, iefirst;
BUILDSTDERR:       |                        ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:707:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   707 |   int ni, npi, ifirst, nei, iefirst;
BUILDSTDERR:       |                             ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:708:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   708 |   int nj, npj, jfirst, nej, jefirst;
BUILDSTDERR:       |           ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:709:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   709 |   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
BUILDSTDERR:       |                                ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   107 |   int nei,nej,iefirst,jefirst;
BUILDSTDERR:       |               ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:107:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   107 |   int nei,nej,iefirst,jefirst;
BUILDSTDERR:       |       ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   106 |   int ni,nj,npi,npj,ifirst,jfirst;
BUILDSTDERR:       |                     ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polygon.cpp:213:15: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |       if (npi == 1 && npj == 1) {
BUILDSTDERR:       |           ~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:186:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   186 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:187:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:188:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   188 |     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/bond_class2.cpp:189:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:277:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   277 |       int interact, num_contacts;
BUILDSTDERR:       |           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:2347:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2347 |   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
BUILDSTDERR:       |                      ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:2347:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2347 |   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
BUILDSTDERR:       |                            ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:221:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   221 |       if (r > eradi + eradj + cut_inner) continue;
BUILDSTDERR:       |               ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                                           ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                                   ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:124:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
BUILDSTDERR:       |                     ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY/pair_body_rounded_polyhedron.cpp:269:14: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |       } else if (npi == 1) {
BUILDSTDERR:       |              ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:608:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   608 |     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:609:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:611:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   611 |     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:612:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   612 |     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:613:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   613 |     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:614:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:615:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   615 |     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:616:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   616 |     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/improper_class2.cpp:821:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   821 |       ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   822 |                fabcd[0],fabcd[2],fabcd[3],
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   823 |                delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   824 |                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:841:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:842:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:843:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:844:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:846:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:847:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:848:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:849:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:851:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   851 |     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:852:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   852 |     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:853:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:854:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:856:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   856 |     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:857:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   857 |     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:858:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   858 |     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:859:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   859 |     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:861:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   861 |     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:862:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   862 |     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:863:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   863 |     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:864:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   864 |     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:866:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   866 |     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:867:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:868:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:869:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:871:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:875:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   875 |     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:876:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   876 |     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/dihedral_class2.cpp:877:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   877 |     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:310:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   310 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2.cpp:348:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   348 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:366:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   371 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   372 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:373:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:407:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:464:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   465 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:464:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   145 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/fix_wall_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:406:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:410:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:411:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   411 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:412:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:445:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:538:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   539 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:538:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:531:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:534:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   534 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:176:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   185 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:178:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2/pair_lj_class2_coul_long.cpp:178:36: warning: 'itamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: ble' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:609:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   609 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:613:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   613 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:614:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:649:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   649 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:650:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   650 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:651:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   651 |     fread(&flagfld,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:652:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   652 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:653:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   653 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:654:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   654 |     fread(&t_target, sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:655:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   655 |     fread(&seed, sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:656:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   656 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:657:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   657 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:658:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   658 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:659:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   659 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:308:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |           Fbmag = prethermostat*sqrt(a_pu);
BUILDSTDERR:       |                                 ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian.cpp:96:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    96 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                     ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp:82:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_brownian_poly.cpp:82:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    82 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
BUILDSTDERR:       |                     ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:400:31: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:404:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |           fread(&a12[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:438:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:439:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   439 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:440:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:543:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |   return factor_lj*phi;
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_colloid.cpp:194:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   194 |       f[i][2] += delz*fpair;
BUILDSTDERR:       |                  ~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:689:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   689 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:693:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   693 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:694:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   694 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:727:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:728:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   728 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:729:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   729 |     fread(&flagfld,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:730:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   730 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:731:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   731 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:732:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   732 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:733:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:734:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate.cpp:735:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricate_poly.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU_poly.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_yukawa_colloid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1916:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1916 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1920:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1920 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1921:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1921 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1953:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1953 |     fread(&mu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1954:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1954 |     fread(&flaglog,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1955:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1955 |     fread(&cut_inner_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1956:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1956 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1957:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1957 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1958:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1958 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1959:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1959 |     fread(&flagHI,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID/pair_lubricateU.cpp:1960:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1960 |     fread(&flagVF,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:143:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:148:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:143:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:188:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:180:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:185:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:182:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_long_cs.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:149:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:146:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:150:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/compute_temp_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:186:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:178:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   178 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:186:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:180:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:180:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:168:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:168:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:170:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_long_cs.cpp:170:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_coul_wolf_cs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:517:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:540:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   540 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:543:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:543:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:188:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:192:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   192 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   193 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:185:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   245 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                                     ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:296:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   296 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:293:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:301:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   302 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/atom_vec_dipole.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |           fread(&epsilon_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |           fread(&sigma_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   357 |           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_freeze.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran_region.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hertz_history.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:680:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   680 |   int ninserted_mols = ninserted_atoms / natom;
BUILDSTDERR:       |       ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:696:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   696 |       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:654:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   654 |           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_pour.cpp:503:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   503 |         coords[0][3] = radtmp;
BUILDSTDERR:       |         ~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:14: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |                             ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1365:27: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1365 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
BUILDSTDERR:       |                ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1174:25: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1174 |   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
BUILDSTDERR:       |   ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/fix_wall_gran.cpp:1201:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1201 |     F_pulloff = 3*M_PI*coh*Reff;
BUILDSTDERR:       |                 ~~~~~~^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:546:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&kn,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   573 |     fread(&kt,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   574 |     fread(&gamman,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:575:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   575 |     fread(&gammat,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:576:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   576 |     fread(&xmu,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_gran_hooke_history.cpp:577:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   577 |     fread(&dampflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |               ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
BUILDSTDERR:    69 |   int i,total,length,offset,num;
BUILDSTDERR:       |                      ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fft3d_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1254:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1254 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1258:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1258 |           fread(&normal_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1259:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1259 |           fread(&damping_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1260:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1260 |           fread(&tangential_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1261:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1261 |           fread(&roll_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1262:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1262 |           fread(&twist_model[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1263:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1263 |           fread(&normal_coeffs[i][j],sizeof(double),4,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1264:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1264 |           fread(&tangential_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1265:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1265 |           fread(&roll_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1266:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1266 |           fread(&twist_coeffs[i][j],sizeof(double),3,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1267:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1267 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1645:14: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1645 |   svector[8] = magtortwist;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1643:14: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1643 |   svector[6] = fr3;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1642:14: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1642 |   svector[5] = fr2;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1641:14: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1641 |   svector[4] = fr1;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1644:14: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1644 |   svector[7] = fr;
BUILDSTDERR:       |   ~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:14: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                             ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1616:27: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1616 |     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1327:11: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1327 |   double *history,*allhistory;
BUILDSTDERR:       |           ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1462:25: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1462 |   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
BUILDSTDERR:       |   ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1427:13: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1427 |     t0 = coh*coh*R2*R2*E;
BUILDSTDERR:       |          ~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1427:20: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1427 |     t0 = coh*coh*R2*R2*E;
BUILDSTDERR:       |          ~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:385:19: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |           history = &allhistory[size_history*jj];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:440:24: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             history[1] += vtr2*dt;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:312:21: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |           touch[jj] = 1;
BUILDSTDERR:       |           ~~~~~~~~~~^~~
/buildmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: dir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |           F_pulloff = 3*MY_PI*coh*Reff;
BUILDSTDERR:       |                       ~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:20: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |           ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:42: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                                   ~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:556:33: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |           magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
BUILDSTDERR:       |                      ~~~~~~~~~~~^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:356:31: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:229:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   229 |       allhistory = firsthistory[i];
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:228:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   228 |       touch = firsttouch[i];
BUILDSTDERR:       |                           ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:918:36: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   918 |           FOURTHIRDS*mix_stiffnessE(Emod[i][j],Emod[i][j],
BUILDSTDERR:       |                      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   919 |                                     poiss[i][j],poiss[i][j]);
BUILDSTDERR:       |                                     ~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:913:30: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   913 |       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:924:32: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:933:36: warning: 'tangential_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   933 |         tangential_coeffs[i][j][0] = tangential_coeffs[j][i][0] =
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   934 |           tangential_coeffs_one[0];
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~~  
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:915:20: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   915 |         Emod[i][j] = Emod[j][i] = normal_coeffs_one[0];
BUILDSTDERR:       |         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:937:36: warning: 'tangential_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   937 |         tangential_coeffs[i][j][k] = tangential_coeffs[j][i][k] =
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   938 |           tangential_coeffs_one[k];
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~~  
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:937:36: warning: 'tangential_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR/pair_granular.cpp:1214:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1214 |   return cutoff;
BUILDSTDERR:       |          ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/gridcomm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/ewald_disp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp: In member function 'virtual void LAMMPS_NS::FixTuneKspace::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:158:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   158 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:163:33: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   163 |       sprintf(new_pair_style,"%s/msm",base_pair_style);
BUILDSTDERR:       |                                 ^~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 24 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:148:31: warning: '/msm' directive writing 4 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   148 |     sprintf(new_pair_style,"%s/msm",base_pair_style);
BUILDSTDERR:       |                               ^~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 24 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:141:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   141 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:134:31: warning: '/long' directive writing 5 bytes into a region of size between 1 and 20 [-Wformat-overflow=]
BUILDSTDERR:   134 |     sprintf(new_pair_style,"%s/long",base_pair_style);
BUILDSTDERR:       |                               ^~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/fix_tune_kspace.cpp:20:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 25 bytes into a destination of size 20
BUILDSTDERR:    36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    37 |       __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:247:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   247 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:247:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   247 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   248 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:243:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   243 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:242:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:188:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:185:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:184:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_msm.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:426:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:430:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:431:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:432:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:433:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   433 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:434:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   434 |           fread(&d[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:435:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:469:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:470:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:471:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   471 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:472:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:567:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:567:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   568 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   560 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:560:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   560 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:563:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   563 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:190:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                    make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR:                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:191:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_born_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:242:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:242:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:238:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:237:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:184:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:181:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:180:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_msm.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:403:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:409:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   409 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:410:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:445:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   445 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:538:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:538:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:531:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:531:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   531 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:534:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   534 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:529:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   529 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:183:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:183:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_coul_long.cpp:177:36: warning: 'itable' may be used uninitiamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: lized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:206:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:208:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:208:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:206:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |     phicoul = prefactor*egamma;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:146:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:146:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:148:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_msm.cpp:148:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:296:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   296 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:299:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   299 |         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:376:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:378:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                          ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:378:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |     table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:376:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:162:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_coul_long.cpp:162:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:360:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |           fread(&buck_a_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:366:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |           fread(&buck_c_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:367:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&cut_buck_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:404:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_buck_long_coul_long.cpp:405:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:522:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   522 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   514 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   514 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:517:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:512:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   512 |       phicoul = prefactor*egamma;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:216:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   216 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:211:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   211 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:220:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:213:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:213:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:220:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:386:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:413:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   413 |               forcecoul = prefactor * fgamma;
BUILDSTDERR:       |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:385:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:416:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:416:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1642:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1642 |                 v5sum += v5_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1641:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1641 |                 v4sum += v4_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1640:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1640 |                 v3sum += v3_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1639:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1639 |                 v2sum += v2_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1638:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1638 |                 v1sum += v1_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1637:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1637 |                 v0sum += v0_directn[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1997:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |                 v5sum += v5_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1996:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1996 |                 v4sum += v4_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1995:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1995 |                 v3sum += v3_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1994:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1994 |                 v2sum += v2_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1993:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1993 |                 v1sum += v1_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/msm.cpp:1992:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1992 |                 v0sum += v0_direct_top[k] * qtmp2;
BUILDSTDERR:       |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:828:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   828 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   832 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:833:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   833 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   834 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   835 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   870 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:972:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   972 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:967:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   967 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:962:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   962 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:520:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   520 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   547 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |              make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR:  table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:196:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:201:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:205:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:205:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   896 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   900 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:901:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   901 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:902:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   902 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:903:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   903 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   935 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   936 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   937 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:938:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   938 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   939 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   940 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   941 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1049:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1049 |       philj6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  1050 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1044:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1044 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1032:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1032:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1032 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1035:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1035 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1030:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1030 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:572:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   572 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:608:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: fsw_coul_long.cpp:611:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   611 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   611 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   218 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:223:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:239:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               evdwl6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   240 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:220:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:220:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   220 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:115:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   115 |   int i,j,ii,jj,inum,jnum,itype,jtype,itable;
BUILDSTDERR:       |                                 ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:474:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   474 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   475 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   466 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   466 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:469:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   464 |       phicoul = prefactor*egamma;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:365:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   365 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:388:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   388 |               forcecoul = prefactor * fgamma;
BUILDSTDERR:       |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:364:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   364 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:391:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:391:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   391 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:208:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:203:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:212:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   213 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:205:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:798:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   798 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   802 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:803:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:804:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   804 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   835 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   836 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:841:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:932:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   932 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   933 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:924:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:924:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   924 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:927:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   927 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   922 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:512:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   512 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:535:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:538:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:538:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   538 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:21: warning: 'erfcmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: ' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:191:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   192 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:536:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   536 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   537 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   538 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   548 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   414 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:416:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:393:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   393 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:389:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   389 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:336:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:332:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   332 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:416:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   416 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:360:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |           fread(&epsilon_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:365:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |           fread(&sigma_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:366:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   398 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_coul_long.cpp:403:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   403 |     fread(&ewald_order,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:478:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:479:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:382:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   382 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:382:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:384:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   384 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:361:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   361 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:357:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   357 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   304 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   300 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_tip4p_long.cpp:384:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   384 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_cg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1547 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1548 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1549 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1550 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1551 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1553 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1554:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1554 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1555 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1556 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1557 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1558 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:979:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   979 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:975:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   975 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:948:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   948 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:944:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   944 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   450 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:452:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:429:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   429 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:425:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   425 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:372:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   372 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:368:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   368 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:452:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   452 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:718:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   718 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:714:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   714 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:687:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   687 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:683:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialimake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: zed]
BUILDSTDERR:   683 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1390:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1390 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1386:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1386 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1321:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1321 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1317:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1317 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp_tip4p.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_stagger.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_tip4p.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap_wrap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/remap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp:264:9: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   264 |       i = ilist[ii];
BUILDSTDERR:       |       ~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/fix_qeq_comb.cpp:263:21: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   263 |     for (ii = 0; ii < inum; ii++) {
BUILDSTDERR:       |                  ~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo_morse.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_adp.cpp:641:24: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   641 |       if (me == 0) grab(fp,filename,file->nr,&file->w2r[i][j][1]);
BUILDSTDERR:       |                    ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:312:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:315:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:340:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_atm.cpp:341:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |     fread(&cut_triple,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.cpp:25:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairComb::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairComb::Short_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3398:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  3398 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3399:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  3399 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairAIREBO::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairAIREBO::REBO_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:1241:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1241 |             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:3283:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3283 |   return piRC;
BUILDSTDERR:       |          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:811:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   811 |           fpair = dC*dwij / rij;
BUILDSTDERR:       |                   ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:855:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   855 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:850:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   850 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:826:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   826 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:822:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   822 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:873:18: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   873 |           f[atomm][0] += fm[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.cpp:837:18: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   837 |           f[atomk][0] -= fi[0] + fj[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:469:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   469 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:470:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:472:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam.cpp:787:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   787 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE/pppm_disp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:143:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:168:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_alloy.cpp:192:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   192 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4981:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4981 |     fgets(s,MAXLINE,fp);  // skip first comment line
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4982:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4982 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4987:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  4987 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5016:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5016 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5084:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5084 |     fgets(s,MAXLINE,fp);  // skip first comment line
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5086:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5086 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5088:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5088 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5092:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5092 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5097:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5097 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5101:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5101 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5103:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5103 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5105:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5105 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5114:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5114 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5121:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5121 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5125:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5125 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5129:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5129 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5131:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5131 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5135:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5135 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5137:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5137 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5141:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5141 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5143:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5143 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5147:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5147 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5149:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5149 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5153:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5153 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5155:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5155 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5159:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5159 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5161:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5161 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5163:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 516make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: 3 |                 fgets(s,MAXLINE,fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5172:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5172 |             fgets(s,MAXLINE,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5179:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5179 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5187:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5187 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5195:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5195 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5203:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5203 |         fgets(s,MAXLINE,fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5210:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5210 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5214:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5214 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5231:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  5231 |             fgets(s,MAXLINE,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:5222:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  5222 |     if(nws==3) {
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:4967:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  4967 |   int i,j,k,n,m;
BUILDSTDERR:       |             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3752 |               ev_tally_xyz(bt_i,bt_j,nlocal,newton_pair,0.0,0.0,ftmp[0],ftmp[1]
BUILDSTDERR:       |               ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  3753 |                   ,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3752:27: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1775:56: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1775 |                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
BUILDSTDERR:       |                                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
BUILDSTDERR:  1776 |                         *-dis_jk[2]*r_ik*r_ik)/(r_ik*r_ik*r_jk*r_jk);
BUILDSTDERR:       |                         ~~~~~~~~~~~~~~~~~~~~~~          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1500:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1500 |             bt_sg[nb_jk].temp=temp_jk;
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1763:52: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1763:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                                     ~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:1764:25: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1763 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
BUILDSTDERR:       |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:  1764 |                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
BUILDSTDERR:       |                         ^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_bop.cpp:3489:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3489 |               else if(temp_kk==temp_ji&&setting==0) {
BUILDSTDERR:       |                       ~~~~~~~^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:326:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:327:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:338:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:350:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:358:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:366:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:375:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   375 |       fgets(s,MAXLIB,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:384:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fgets(s,MAXLIB,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:391:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |       fgets(s,MAXLIB,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:404:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:422:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   422 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:431:19: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |              fgets(s,MAXLIB,fp);
BUILDSTDERR:       |              ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:446:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:464:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:473:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |               fgets(s,MAXLIB,fp);
BUILDSTDERR:       |               ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:488:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   488 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:506:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |             fgets(s,MAXLIB,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:515:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |               fgets(s,MAXLIB,fp);
BUILDSTDERR:       |               ~~~~~^~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairComb3::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairComb3::Short_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:2309:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2309 |             {com6+=prefac_ij2*pcrossk*dfc_k;}
BUILDSTDERR:       |              ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:1794:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1794 |      prady  += 1.0 *  btor[2] * bbtor * att_eng;
BUILDSTDERR:       |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb3.cpp:1793:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1793 |      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
BUILDSTDERR:       |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:143:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:168:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_fs.cpp:194:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   194 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eam_cd.cpp:387:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   387 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_gw_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:970:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   970 |           fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:974:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   974 |           fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp: In member function 'void LAMMPS_NS::PairEIM::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_eim.cpp:500:22: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |       if (!grabsingle(fptr,i))
BUILDSTDERR:       |            ~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_rebo.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_nb3b_harmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:987:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:993:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:994:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   994 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:995:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:996:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:997:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:998:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:999:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1000:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1001:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1002:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1003:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1004:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1005:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1006:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1007:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1008:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1009:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1010:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1011:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1011 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1012:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1013:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1014:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1015:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1016:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1017:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1017 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1018:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 1018 |     fgets(s,Mmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: AXLINE,fp);    sscanf(s,"%lg",&lambda_2);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1019:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1020:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1023:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1023 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1032:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fgets(s,MAXLINE,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1039:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1039 |         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
BUILDSTDERR:       |                     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1046:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1046 |     fgets(s,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:1052:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1052 |       fgets(s,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_lcbop.cpp:24:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairLCBOP::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairLCBOP::SR_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_sw.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:579:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   579 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:580:43: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   580 |     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                      ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:596:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   596 |       fgets(line,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:614:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   614 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:650:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   650 |       fgets(line,MAXLINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:881:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   881 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:199:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |         if (emb > epsilon) {
BUILDSTDERR:       |         ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   290 |         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_polymorphic.cpp:290:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_mod_c.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_tersoff_zbl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_vashishta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_atom_swap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_break.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   629 |   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   607 |   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   202 |   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
BUILDSTDERR:       |                         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   618 |   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:596:44: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   596 |   for (iangle = 0; iangle < num_angle[iprev]; iangle++) {
BUILDSTDERR:       |                                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   202 |   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:420:24: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   420 |               angle_eng(jnextangletype,j,jnext,jlast);
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:419:24: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |               angle_eng(jangletype,jprev,j,jnext) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:418:24: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |               angle_eng(inextangletype,i,inext,ilast) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:417:24: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   417 |               angle_eng(iangletype,iprev,i,inext) -
BUILDSTDERR:       |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_swap.cpp:201:9: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |   int i,j,ii,jj,m,inum,jnum;
BUILDSTDERR:       |         ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_bond_create.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp: In member function 'virtual void LAMMPS_NS::FixTFMC::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_tfmc.cpp:255:15: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   255 |     group->xcm(igroup,masstotal,cm);
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/message.cpp:47:63: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    47 |     lmp->cslib = new CSlib(clientserver-1,arg[2],arg[3],&world);
BUILDSTDERR:       |                                                               ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    43 |   if (protocol == MD) {
BUILDSTDERR:       |   ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/fix_client_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:350:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   350 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:354:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:355:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:383:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:384:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |     fread(&max_cell_size,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:385:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:386:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/pair_dsmc.cpp:387:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:116:19: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |           x[m][2] = xold[2];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:115:19: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   115 |           x[m][1] = xold[1];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:114:19: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   114 |           x[m][0] = xold[0];
BUILDSTDERR:       |           ~~~~~~~~^~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:15:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/atom.h:299:48: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   299 |     if (map_style == 1) return map_array[global];
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
BUILDSTDERR:    42 |   tagint atomid;
BUILDSTDERR:       |          ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_msd_nongauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE/server_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MC/fix_gcmc.cpp:2297:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2297 |           if (imolecule == molecule[j]) continue;
BUILDSTDERR:       |           ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/compute_ti.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_efield.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:559:15: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   559 |   while (size >= num && num_of_bits < 32) {
BUILDSTDERR:       |          ~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:600:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:   600 |   while (bytes[num_of_bytes] >= num) {
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:654:19: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   654 |   if (num_of_bits >= num_of_bytes * 8) {
BUILDSTDERR:       |       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:655:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   655 |     for (i = 0; i < num_of_bytes; i++) {
BUILDSTDERR:       |                 ~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:660:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   660 |     for (i = 0; i < num_of_bytes-1; i++) {
BUILDSTDERR:       |                 ~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:695:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:   695 |     if (lastbits < num_of_bits) {
BUILDSTDERR:       |         ~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:935:21: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
BUILDSTDERR:   935 |     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
BUILDSTDERR:       |                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:46:25: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:    46 | #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
BUILDSTDERR:       |                     ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
BUILDSTDERR:   939 |     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
BUILDSTDERR:       |              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:46:25: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
BUILDSTDERR:    46 | #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
BUILDSTDERR:       |                     ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
BUILDSTDERR:  1115 |     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
BUILDSTDERR:       |              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1141:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1141 |         thiscoord[2] = receivebits(buf, bitsizeint[2]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1140:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1140 |         thiscoord[1] = receivebits(buf, bitsizeint[1]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:1139:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1139 |         thiscoord[0] = receivebits(buf, bitsizeint[0]);
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:950:28: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   950 |           abs(thiscoord[0] - prevcoord[0]) < larger &&
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:951:28: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   951 |           abs(thiscoord[1] - prevcoord[1]) < larger &&
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/dump_xtc.cpp:952:28: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   952 |           abs(thiscoord[2] - prevcoord[2]) < larger) {
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   324 |         } else if (me == proc && i == iatom) {
BUILDSTDERR:       |                    ~~~~~~~~~~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_deposit.cpp:589:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   589 |       atom->nbonds += onemols[imol]->nbonds;
BUILDSTDERR:       |                                   ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_oneway.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_gld.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_bcc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_orient_fcc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_thermal_conductivity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_viscosity.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:322:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:326:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:327:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:328:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:329:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:330:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:360:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:361:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   361 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:362:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/fix_ttm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/xdr_compat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:373:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   373 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:382:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   414 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   415 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:478:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   478 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
BUILDSTDERR:       |                                           ~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:150:65: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |             evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~~~~~       
BUILDSTDERR:   150 |                                         r0n[itype][jtype]*rninv -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   151 |                                         nn[itype][jtype] *
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~       
BUILDSTDERR:   152 |                                         r0m[itype][jtype]*rminv) -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~~~~~~~ 
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_cut.cpp:152:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   151 |                                         nn[itype][jtype] *
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   152 |                                         r0m[itype][jtype]*rminv) -
BUILDSTDERR:       |                                         ~~~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:248:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   248 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:249:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:250:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   250 |     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_charmm.cpp:251:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine.cpp:196:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   196 |   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:420:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:424:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |           fread(&e0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:425:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:426:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |           fread(&nn[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&mm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:466:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:467:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   467 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:553:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   553 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:553:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   553 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:556:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   556 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:551:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   551 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:563:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   563 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
BUILDSTDERR:       |                                           ~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:186:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:191:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:196:57: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   197 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:188:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
   make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR:    |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC/pair_nm_cut_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_delta.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:249:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   249 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:250:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   250 |     fread(&b[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_periodic.cpp:251:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   251 |     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp:218:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_cosine_squared.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp:218:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_harmonic.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp:292:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   292 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/angle_table.cpp:293:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   293 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_bond.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_angle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_full.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:219:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:220:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   220 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:221:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   221 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene.cpp:222:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   222 |     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_molecular.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/atom_vec_template.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:228:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:229:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:230:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:231:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   231 |     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_fene_expand.cpp:232:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   232 |     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_gromos.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_harmonic.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:175:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   175 |     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:176:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   176 |     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_morse.cpp:177:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   177 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:170:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   170 |     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:171:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   171 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_nonlinear.cpp:172:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   172 |     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:281:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_quartic.cpp:284:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/bond_table.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:430:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmm.cpp:432:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |     fread(&weightflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   471 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_charmmfsw.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&weightflag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_harmonic.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_helix.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   325 |     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_multi_harmonic.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/dihedral_opls.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:338:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:339:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   339 |     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:340:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   340 |     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:208:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |       pd = -pd;
BUILDSTDERR:       |       ~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_cvff.cpp:207:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |       p = 2.0 - p;
BUILDSTDERR:       |       ~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp:279:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   279 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_harmonic.cpp:280:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:321:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/improper_umbrella.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/fix_cmap.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:374:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   374 |         if (donor_flag == 0) type2param[i][j][k] = nparams;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:301:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   301 |         if (donor_flag == 0) type2param[i][j][k] = nparams;
BUILDSTDERR:       |         ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:200:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   200 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:133:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:133:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   133 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:378:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   382 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   439 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   441 |     fread(&cut_coul_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:501:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   501 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:167:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:436:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   436 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   440 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   441 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   475 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   476 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   477 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:533:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   533 |       philj6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   534 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:528:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:195:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |               evdwl6 = -lj4[itype][jtype]*r6inv +
BUILDSTDERR:       |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   196 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:99:33: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    99 |   int i,j,ii,jj,inum,jnum,itype,jtype;
BUILDSTDERR:       |                                 ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:479:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:506:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:507:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   507 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:508:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   508 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:509:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   509 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:510:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:321:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   321 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:317:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:264:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   264 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_tip4p_cut.cpp:260:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   260 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   620 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   624 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   625 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   626 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   662 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   663 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   665 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   666 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   668 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   669 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   670 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   671 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   672 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:361:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   361 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:357:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   357 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   304 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   300 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/atom_vec_peri.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_damage_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_dilatation_atom.cpp:116:52: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |     if (mask[i] & groupbit) dilatation[i] = theta[i];
BUILDSTDERR:       |                                             ~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/compute_plasticity_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/fix_peri_neigh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:569:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:573:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   573 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:574:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   574 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:575:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   575 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:576:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   576 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:577:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   577 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_eps.cpp:578:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   578 |           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:501:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_lps.cpp:502:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   502 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:423:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&kspring[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:429:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_pmb.cpp:430:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_dynamic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:551:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   551 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:555:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   555 |           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:556:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   556 |           fread(&shearmodulus[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:557:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   557 |           fread(&s00[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:558:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   558 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:559:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   559 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:560:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   560 |           fread(&m_lambdai[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI/pair_peri_ves.cpp:561:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   561 |           fread(&m_taubi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq.cpp:490:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   490 |   return m;
BUILDSTDERR:       |          ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_point.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_fire.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_shielded.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS/fix_poems.cpp:967:33: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   967 |     if (me == 0) nlen = readline(fp,&line,&maxline);
BUILDSTDERR:       |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/compute_event_displace.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ/fix_qeq_slater.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_prd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_event_tad.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:307:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |     fbiasr = fbias / r0max / rmax;
BUILDSTDERR:       |              ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:307:12: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |     fbiasr = fbias / r0max / rmax;
BUILDSTDERR:       |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:326:29: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |   outvec[4] = atom->tag[jmax];
BUILDSTDERR:       |                             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_global.cpp:325:29: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   325 |   outvec[3] = atom->tag[imax];
BUILDSTDERR:       |                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/hyper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   616 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
BUILDSTDERR:       |                                  ~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_neb.cpp:616:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   616 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
BUILDSTDERR:       |                                                        ~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp:480:19: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   480 |     maxhalf[iold] = ijhalf;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/fix_hyper_local.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixHyperLocal::unpack_reverse_comm(int, int*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In constructor 'LAMMPS_NS::FixHyperLocal::FixHyperLocal(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::FixHyperLocal::build_bond_list(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/neb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/prd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/temper.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/tad.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA/verlet_split.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_erotate_rigid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_ke_rigid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/compute_rigid_local.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |      fshake = ((FixShake*) modify->fix[id_shake]);
BUILDSTDERR:       |                                                ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nh_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nph_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nve_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_npt_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_nvt_small.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:397:23: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   397 |         tflag[m-1][2] = zflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:390:60: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |       if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
BUILDSTDERR:       |                                                      ~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:390:44: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |       if (domain->dimension == 2 && (xflag == 1.0 || yflag == 1.0))
BUILDSTDERR:       |                                      ~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:359:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   359 |       if (domain->dimension == 2 && zflag == 1.0)
BUILDSTDERR:       |           ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:365:23: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   365 |         fflag[m-1][1] = yflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:364:23: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   364 |         fflag[m-1][0] = xflag;
BUILDSTDERR:       |         ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:342:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   342 |     if (strcmp(arg[iarg],"force") == 0) {
BUILDSTDERR:       |                        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:225:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |     if (custom_flag) delete [] molecule;
BUILDSTDERR:       |                                ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1483:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1483 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1478:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1478 |         lbonus[line[i]].theta = theta;
BUILDSTDERR:       |                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1462:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1462 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1406:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1406 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1405:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1405 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1405:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1405 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1628:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1628 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1615:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1615 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1577:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1577 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1576:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1576 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:1576:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1576 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2224:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2224 |           radone = lbonus[line[i]].length;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2297:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2297 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2123:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2123 |     if (infile && inbody[ibody]) continue;
BUILDSTDERR:       |                   ~~~~~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2104:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2104 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2021:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2021 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid.cpp:2086:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2086 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_append_atoms.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_msst.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_nphug.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp: In member function 'virtual void LAMMPS_NS::FixWallPiston::post_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK/fix_wall_piston.cpp:289:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   289 |       if (zloflag && x[i][2] < zlo - roughoff) {
BUILDSTDERR:       |                                ~~~~^~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_shake.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/compute_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/atom_vec_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2561:60: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 93 [-Wformat-truncation=]
BUILDSTDERR:  2561 |       snprintf(str,128,"Cannot open fix rigid restart file %s",outfile);
BUILDSTDERR:       |                                                            ^~  ~~~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:15:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 36 and 163 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2659:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2659 |   if (me == 0) fclose(fp);
BUILDSTDERR:       |                ~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1394 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1389 |         lbonus[line[i]].theta = theta;
BUILDSTDERR:       |                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1374 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1532 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1519 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   515 |   if (langflag) random = new RanMars(lmp,seed + comm->me);
BUILDSTDERR:       |                                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2380 |           radone = lbonus[line[i]].length;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2466:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2466 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2264:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2264 |     if (infile && inbody[ibody]) continue;
BUILDSTDERR:       |                   ~~~~~~~~~~~~^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2242 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2157 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
BUILDSTDERR:       |                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2224 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_langevin_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_precession_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_setforce_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_nve_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/fix_neb_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/min_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/neb_spin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:539:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:543:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |           fread(&DM[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:544:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |           fread(&v_dmx[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:545:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |           fread(&v_dmy[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:546:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |           fread(&v_dmz[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:547:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:548:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   548 |           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:549:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   549 |           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:550:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   550 |           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:584:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   584 |     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:585:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   585 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_dmi.cpp:586:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   586 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:523:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   523 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:527:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |           fread(&ME[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:528:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |           fread(&v_mex[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&v_mey[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&v_mez[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:561:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   561 |     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:562:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   562 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_magelec.cpp:563:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   563 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:506:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:510:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |           fread(&J1_mag[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:511:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   511 |           fread(&J1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:512:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |           fread(&J2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:513:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |           fread(&J2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:514:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_exchange.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:695:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   695 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:699:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |           fread(&g1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:700:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   700 |           fread(&g1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:701:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   701 |           fread(&g2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:702:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   702 |           fread(&g2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:703:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   703 |           fread(&q1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:704:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |           fread(&q1_mech[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:705:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   705 |           fread(&q2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:706:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   706 |           fread(&q2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:707:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   707 |           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:741:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   741 |     fread(&cut_spin_neel_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:742:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   742 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN/pair_spin_neel.cpp:743:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   743 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_sna_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snad_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/compute_snav_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_wall_srd.cpp:55:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    55 |       int newwall;
BUILDSTDERR:       |           ^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |         ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |                   ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/kim_query.cpp:90:30: warning: unused variable 'value' [-Wunused-variable]
BUILDSTDERR:    90 |   char *varname, *function, *value;
BUILDSTDERR:       |                              ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp: In function '_ZN9LAMMPS_NS8PairSNAP17compute_optimizedEii._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp:477:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   477 |     int ielem;
BUILDSTDERR:       |         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/pair_snap.cpp:521:12: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   521 |     double starttime, endtime;
BUILDSTDERR:       |            ^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP/sna.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:    91 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   108 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
BUILDSTDERR:       |              ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   146 |   PyObject * result = PyEval_CallObject(py_init, NULL);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   164 |   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   182 |   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   200 |   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   219 |   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
BUILDSTDERR:       |              ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable]
BUILDSTDERR:   237 |   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
BUILDSTDERR:       |              ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM/pair_kim.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2966:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2966 |       c1 = tbonus[tri[i]].c1;
BUILDSTDERR:       |                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2954:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2954 |       length = lbonus[line[i]].length;
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2938:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2938 |       shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3049:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3049 |       inertia = tbonus[tri[i]].inertia;
BUILDSTDERR:       |                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3036:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3036 |       biglist[k].theta = lbonus[line[i]].theta;
BUILDSTDERR:       |                                        ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:3024:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  3024 |       shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1017:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1017 |       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
BUILDSTDERR:       |                               ~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2549:22: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2549 |   AtomVecTri::Bonus *tbonus;
BUILDSTDERR:       |                      ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2703:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2703 |           double length = lbonus[line[i]].length;
BUILDSTDERR:       |                                         ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:2679:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2679 |           double *shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1548:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1548 |       xbcoll[2] = xbcollfirst[2];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1547:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1547 |       xbcoll[1] = xbcollfirst[1];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1544:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1544 |       xscoll[1] = xscollfirst[1];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1545:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1545 |       xscoll[2] = xscollfirst[2];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1546:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1546 |       xbcoll[0] = xbcollfirst[0];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1543:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1543 |       xscoll[0] = xscollfirst[0];
BUILDSTDERR:       |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1551:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1551 |       norm[2] = normfirst[2];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1550:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1550 |       norm[1] = normfirst[1];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1549:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1549 |       norm[0] = normfirst[0];
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1578:12: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1578 |       else if (type != WALL)
BUILDSTDERR:       |            ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD/fix_srd.cpp:1577:50: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1577 |         force_torque(v[i],vsnew,xscoll,xbcoll,f[j],NULL);
BUILDSTDERR:       |                                                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/pair_python.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp:410:37: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
BUILDSTDERR:   410 |   else if (format && strlen(format) != ninput+noutput)
BUILDSTDERR:       |                      ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON/python_impl.cpp:320:20: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |     PyTuple_SetItem(pArgs,i,pValue);
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:249:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |   return correction;
BUILDSTDERR:       |          ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:331:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   332 |                 virial[0] + virial[1] + virial[2]) / 3.0 *
BUILDSTDERR:       |                 ~~~~~~~~~                     
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/compute_pressure_bocs.cpp:393:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   393 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:516:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   516 |       for (j=0; j<narea.size(); ++j)
BUILDSTDERR:       |                 ~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:531:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   531 |       if (neighs != narea.size())
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:548:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   548 |         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
BUILDSTDERR:       |                   ~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI/compute_voronoi_atom.cpp:592:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   592 |       if (neighs != narea.size())
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:295:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   295 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:296:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   296 |     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/bond_oxdna_fene.cpp:297:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   297 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dot.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS/fix_bocs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_excv.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_stk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:371:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   371 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:457:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |           fread(&kappa_dh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:463:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:464:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |           fread(&b_dh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:465:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:466:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:499:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:500:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:501:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   685 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   832 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |           fread(&k_cxst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |           fread(&a_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   850 |           fread(&b_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   851 |           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |           fread(&a_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   855 |           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   856 |           fread(&b_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   857 |           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   859 |           fread(&a_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:860:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   860 |           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   861 |           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   862 |           fread(&b_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   863 |           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   865 |           fread(&a_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   866 |           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   867 |           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   868 |           fread(&b_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   869 |           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   871 |           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   936 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   937 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   938 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DenseMatrix.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/MatrixLibrary.h:4,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_TypeDefs.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/ATC_Method.h:5,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC/fix_atc.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/DependencyManager.h:167:18:   required from here
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
BUILDSTDERR:   612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
BUILDSTDERR:       |                                                  ~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:575:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   575 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:717:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   717 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   722 |           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   723 |           fread(&sigma_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   724 |           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   725 |           fread(&b_ss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   726 |           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   728 |           fread(&sigma_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   729 |           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   730 |           fread(&b_sb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   731 |           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   732 |           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:733:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |           fread(&sigma_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:734:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:735:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |           fread(&b_bb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:736:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   736 |           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:779:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   779 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:780:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   780 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_excv.cpp:781:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   781 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   831 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&k_cxst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |           fread(&a_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&b_cxst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |           fread(&a_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&b_cxst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |           fread(&a_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_comake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: axstk.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&b_cxst5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1024 |           fread(&a_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&b_cxst6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1030 |           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1031 |           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1033 |           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1034 |           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1035 |           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1036 |           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1037 |           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1107 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1108 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1109 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:799:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   799 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:978:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   978 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |           fread(&a_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   985 |           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   986 |           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   988 |           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   989 |           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   990 |           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:992:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   992 |           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |           fread(&shift_hb[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |           fread(&a_hb1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&b_hb1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&a_hb2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&b_hb2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: Wunused-result]
BUILDSTDERR:  1005 |           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&a_hb3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&b_hb3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1011 |           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&a_hb4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&b_hb4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1017 |           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&a_hb7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1022 |           fread(&b_hb7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1023 |           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&a_hb8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&b_hb8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1029:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1029 |           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1104 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1105:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1105 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1106:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1106 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_edpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:833:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   833 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:995:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1000:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1000 |           fread(&epsilon_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1001:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1001 |           fread(&a_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1002:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1002 |           fread(&cut_st_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1003:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |           fread(&cut_st_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1004:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1005:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1006:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1007:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1007 |           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1008:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1008 |           fread(&b_st_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1009:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1009 |           fread(&b_st_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1010:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1010 |           fread(&shift_st[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1012:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1012 |           fread(&a_st4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1013:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1013 |           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1014:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1014 |           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1015:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1015 |           fread(&b_st4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1016:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1016 |           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1018:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1018 |           fread(&a_st5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1019:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1020:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1021:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1021 |           fread(&b_st5[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1022:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
 1022 |           freamake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: d(&dtheta_st5_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1024:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1024 |           fread(&a_st6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1025:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1025 |           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1026:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1027:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |           fread(&b_st6[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1028:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1028 |           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1030:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1030 |           fread(&a_st1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1031:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1031 |           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1032:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1032 |           fread(&b_st1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1033:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1033 |           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1034:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1034 |           fread(&a_st2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1035:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1035 |           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1036:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1036 |           fread(&b_st2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1037:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1037 |           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1103 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1104:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1104 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1105 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   785 |   int irequest;
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   950 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   955 |           fread(&k_xst[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   956 |           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   957 |           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   958 |           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   959 |           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   960 |           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   961 |           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   962 |           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   963 |           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   965 |           fread(&a_xst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   966 |           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   967 |           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   968 |           fread(&b_xst1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   969 |           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   971 |           fread(&a_xst2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   972 |           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   973 |           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   974 |           fread(&b_xst2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   975 |           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   977 |           fread(&a_xst3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_resmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: ult [-Wunused-result]
BUILDSTDERR:   978 |           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   979 |           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   980 |           fread(&b_xst3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   981 |           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   983 |           fread(&a_xst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   984 |           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   985 |           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   986 |           fread(&b_xst4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   987 |           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   989 |           fread(&a_xst7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   990 |           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   991 |           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   992 |           fread(&b_xst7[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   993 |           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   995 |           fread(&a_xst8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |           fread(&b_xst8[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   999 |           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1072 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1073 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1074 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_mdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_edpd_temp_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/compute_tdpd_cc_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/atom_vec_tdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_edpd_source.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_edpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_mvv_tdpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/fix_tdpd_source.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:457:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:461:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:462:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:463:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |           fread(&power[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:464:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:465:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |           fread(&kappa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:466:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |           fread(&powerT[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:467:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   467 |           fread(&cutT[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:470:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   470 |             fread(&sc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:474:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |             fread(&kc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:512:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |           Q[j]    -= ( dQc - dQd + dQr );
BUILDSTDERR:       |                      ~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |           Q[j]    -= ( dQc - dQd + dQr );
BUILDSTDERR:       |                        ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_edpd.cpp:223:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd_rhosum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:352:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:356:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |           fread(&A_att[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:357:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   357 |           fread(&B_rep[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:358:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:359:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   359 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:360:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   360 |           fread(&cut_r[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:391:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_mdpd.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:400:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:404:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&power[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cutcc[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:410:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   410 |             fread(&kappa[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:411:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   411 |             fread(&epsilon[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:412:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   412 |             fread(&powercc[i][j][k],sizeof(double),1,fp);
BUILDSTDERR:       |             ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:450:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO/pair_tdpd.cpp:451:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   451 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/angle_sdk.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   383 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&lj_type[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:389:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:390:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:420:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   420 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:421:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   421 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:422:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   422 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk.cpp:423:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:478:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   478 |           fread(&lj_type[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:479:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:480:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   480 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:481:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   481 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:514:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   514 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:515:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   515 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:516:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   516 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:517:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   517 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:518:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   518 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:519:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, int, FILE*, FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp:124:7: warning: 'cols' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   124 |       if (j == cols) {
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/group_ndx.cpp:160:18: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |       write_group(fp,i,atom,group,comm->me,comm->nprocs,world,screen,logfile);
BUILDSTDERR:       |       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/ndx_group.cpp:148:30: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |           tags = read_section(fp,num);
BUILDSTDERR:       |                  ~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_saed.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/compute_xrd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/colvarproxy_lammps.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS/fix_colvars.cpp:543:33: warning: unused variable 'id' [-Wunused-variable]
BUILDSTDERR:   543 |     std::vector<int>           &id = *(proxy->modify_atom_ids());
BUILDSTDERR:       |                                 ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/compute_dpd_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::invoke_vector(LAMMPS_NS::bigint)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:434:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
BUILDSTDERR:   434 |         snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
BUILDSTDERR:       |                                                         ^~  ~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:22:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::options(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:561:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
BUILDSTDERR:   561 |           snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
BUILDSTDERR:       |                                                           ^~  ~~~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp:22:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/atom_vec_dpd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_dpd_energy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_cv.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:216:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   216 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:218:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:219:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:225:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   225 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:235:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table.cpp:237:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nbin_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:435:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   437 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:438:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:444:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:472:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   472 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_eos_table_rx.cpp:474:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   474 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_shardlow.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:23:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   208 |                                        onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   209 |                                        tag[j]-tagprev);
BUILDSTDERR:       |                                        ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |                   which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:19:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:35:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    35 | #define MAX(A,B) ((A) > (B) ? (A) : (B))
BUILDSTDERR:       |                   ~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
BUILDSTDERR:   324 |         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
BUILDSTDERR:       |                        ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:549:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   549 |             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:567:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   567 |             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/fix_rx.cpp:583:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   583 |     for (int i = 1; i < nu_bin.size(); ++i)
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:319:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   319 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:381:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   381 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:416:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   416 |     fread(&temperature,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:417:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   417 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:418:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   418 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt.cpp:419:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:412:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   412 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:482:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   482 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   486 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:487:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   487 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:488:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   488 |           fread(&kappa[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:489:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:519:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:520:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   520 |     fread(&seed,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:521:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   521 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:365:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:367:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:368:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   368 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:374:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   374 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:387:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:389:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:708:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   708 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:709:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   709 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |         f[i][2] += delz*fpair;
BUILDSTDERR:       |                    ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy.cpp:189:45: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
BUILDSTDERR:       |                                             ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:579:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   579 |     mixWtSite2 = nMolecules2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:574:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   574 |     mixWtSite2 = fraction2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:573:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   573 |     mixWtSite2old = fractionOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_table_rx.cpp:578:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   578 |     mixWtSite2old = nMoleculesOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:973:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   973 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:977:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   977 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1003:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1003 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1004:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1004 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1005:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1005 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1006:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1006 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1223:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1223 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1237:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1237 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1216:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1216 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
BUILDSTDERR:       |                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1230:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1230 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
BUILDSTDERR:       |                                   ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1223:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1223 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1237:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1237 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1216:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1216 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_exp6_rx.cpp:1230:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1230 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
BUILDSTDERR:       |     ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fgets(line,MAXLINE,fp);                         // no match, skip section
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   512 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   513 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
BUILDSTDERR:       |                                          ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   519 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |   fgets(line,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   534 |     fgets(line,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   853 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   854 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1009 |     mixWtSite2old = fractionOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1014 |     mixWtSite2old = nMoleculesOld2;
BUILDSTDERR:       |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1015 |     mixWtSite2 = nMolecules2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |     mixWtSite2 = fraction2;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/compute_temp_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude_transform.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_langevin_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:363:7: warning: unused variable 'irequest' [-Wunused-variable]
BUILDSTDERR:   363 |   int irequest = neighbor->request(this,instance_me);
BUILDSTDERR:       |       ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:494:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:499:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |           fread(&polar[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:501:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |           fread(&thole[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:503:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   503 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   539 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   541 |     fread(&thole_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   543 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   544 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:545:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:546:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   546 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:547:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   547 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   228 |             if (drudetype[type[i]] != NOPOL_TYPE &&
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   229 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:193:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   222 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   227 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  224 make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   236 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:225:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:671:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   671 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   672 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:664:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   664 |     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
BUILDSTDERR:   665 |         di_closest != j)
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~                                                       
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:666:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   666 |       phicoul += factor_e * dcoul;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:666:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   663 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:658:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   658 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/fix_drude.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:315:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&polar[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&thole[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:351:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   351 |     fread(&thole_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE/pair_thole.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_atom_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_ke_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/atom_vec_electron.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_deform_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/compute_temp_region_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nh_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nph_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_langevin_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_npt_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nve_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_nvt_sllod_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/fix_temp_rescale_eff.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/compute_fep.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:276:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   276 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   280 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:281:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   310 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:311:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:315:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_cut_soft.cpp:363:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   363 |     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/fix_adapt_fep.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   300 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:304:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:375:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_coul_long_soft.cpp:376:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:384:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:392:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   432 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   433 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   434 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:435:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:500:23: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   500 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:495:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   495 |     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:143:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   143 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:841:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   841 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   847 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:848:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   848 |           fread(&eps14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:849:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   849 |           fread(&sigma14[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   884 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:885:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   885 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   886 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   888 |     fread(&cut_lj_inner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   889 |     fread(&cut_lj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   890 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:891:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   891 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:892:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   892 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:982:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   982 |       (1.0/(denlj*denlj) - 1.0/denlj);
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:974:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   974 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:975:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   975 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:528:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   528 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:550:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   550 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
BUILDSTDERR:       |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: );
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:188:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               (1.0/(denlj*denlj) - 1.0/denlj);
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:181:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:182:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   182 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:969:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   969 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:972:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   972 |         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:996:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   996 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:997:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   997 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF/pair_eff_cut.cpp:998:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   998 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:77:10: warning: unused variable 'fraction' [-Wunused-variable]
BUILDSTDERR:    77 |   double fraction;
BUILDSTDERR:       |          ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:493:10: warning: unused variable 'fraction' [-Wunused-variable]
BUILDSTDERR:   493 |   double fraction,forcecoul,forcelj,phicoul,philj;
BUILDSTDERR:       |          ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:401:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   405 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   406 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:407:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   407 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:408:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   408 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   442 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:443:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   443 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   446 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   447 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   448 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:449:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   449 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:450:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:524:23: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   524 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:518:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   518 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:517:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   517 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:160:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:161:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:323:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:330:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   362 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   363 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   364 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   365 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   366 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_class2_soft.cpp:367:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   367 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:380:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   380 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   384 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:388:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:425:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   429 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   430 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:431:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   431 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:497:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:492:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:148:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:144:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:797:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   797 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   801 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   802 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:803:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:804:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   804 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:839:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |     fread(&alphac,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   842 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   843 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   844 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:845:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   845 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:846:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   846 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:928:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   928 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:920:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   920 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:921:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   921 |     phicoul = prefactor*erfc;
BUILDSTDERR:       |     ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:493:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   493 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:510:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   510 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
BUILDSTDERR:       |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   509 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:176:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR:   176 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:169:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:170:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:658:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   658 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   662 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   663 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:664:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:665:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   665 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:698:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   698 |     fread(&nlambda,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |     fread(&alphalj,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   701 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   702 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:703:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   703 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:704:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:756:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   756 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                            ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_soft.cpp:412:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
BUILDSTDERR:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   413 |                              evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:524:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   524 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   526 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:530:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:531:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:532:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:533:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   533 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:534:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   534 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:380:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:376:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   323 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:316:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:323:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   323 |           fread(&lambda[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_morse_soft.cpp:324:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   324 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&typeO,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&typeH,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&typeB,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&typeA,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&qdist,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:348:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   348 |             f[jH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:344:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   344 |             f[jH1][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:291:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   291 |             f[iH2][0] += fH[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP/pair_tip4p_long_soft.cpp:287:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |             f[iH1][0] += fH[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD/dump_h5md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_dumbbell.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_ellipsoid.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_gaussian_bump.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_factory.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_plane_wiggle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_spine.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_torus.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_final.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_funcs.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_dens_init.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp: In constructor 'LAMMPS_NS::MEAM::MEAM(LAMMPS_NS::Memory*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_impl.cpp:46:21: warning: operation on '((LAMMPS_NS::MEAM*)this)->LAMMPS_NS::MEAM::Ec_meam[i][j]' may be undefined [-Wsequence-point]
BUILDSTDERR:    46 |       Ec_meam[i][j] = re_meam[i][j] = alpha_meam[i][j] = delta_meam[i][j] = Ec_meam[i][j] = ebound_meam[i][j] = attrac_meam[i][j] = repuls_meam[i][j] = 0.0;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_global.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_force.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_param.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp:446:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   446 |     rhobar2 = rho02 / rho_bkgd2 * G2;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/meam_setup_done.cpp:445:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   445 |     rhobar1 = rho01 / rho_bkgd1 * G1;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_linalg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_splinetab.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   394 |    double f,dp;
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   375 |  double alp = al,alm = al;
BUILDSTDERR:       |                  ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   158 |   double x0,x1,dx,dr;
BUILDSTDERR:       |                   ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   203 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   246 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   306 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   343 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   109 |     fgets(line,sizeof(line),in);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   123 |       fgets(line,sizeof(line),in);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:    63 |     for( int i = 0; i < parts.size(); ++i ){
BUILDSTDERR:       |                     ~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC/pair_meamc.cpp:589:32: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   589 |     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
BUILDSTDERR:       |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:227:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   227 |        fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:228:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:229:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift.cpp:230:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   259 |          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   260 |          fread(&a[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   263 |          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |          ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp:208:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   208 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_dipole.cpp:209:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:234:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   234 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:235:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:240:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   240 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:241:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   241 |     fread(&C[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_fourier_simple.cpp:242:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   242 |     fread(&N[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:235:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   235 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:236:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   236 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:237:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   237 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/angle_quartic.cpp:238:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   238 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:180:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   180 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:181:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   181 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:184:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   184 |     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_ackland_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_cnp_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_basal_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_entropy_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_grem.cpp:89:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    89 |       scalar = (temperature->dof * boltz * t +
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:    90 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
BUILDSTDERR:       |                 ~~~~~~~~~                     
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_pressure_cylinder.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:24: warning: unused variable 'mx' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                        ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:27: warning: unused variable 'itag' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                           ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:594:32: warning: unused variable 'jtag' [-Wunused-variable]
BUILDSTDERR:   594 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
BUILDSTDERR:       |                                ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:10: warning: unused variable 'nbc' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |          ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:20: warning: unused variable 'tbl' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |                    ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:599:30: warning: unused variable 'tbm' [-Wunused-variable]
BUILDSTDERR:   599 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
BUILDSTDERR:       |                              ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:600:13: warning: unused variable 'lmax_local' [-Wunused-variable]
BUILDSTDERR:   600 |   const int lmax_local = lmax;
BUILDSTDERR:       |             ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:609:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   609 |   double t0,t1;
BUILDSTDERR:       |          ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:609:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:   609 |   double t0,t1;
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:618:18: warning: unused variable 'tsort' [-Wunused-variable]
BUILDSTDERR:   618 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
BUILDSTDERR:       |                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:618:42: warning: unused variable 'tlookup' [-Wunused-variable]
BUILDSTDERR:   618 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
BUILDSTDERR:       |                                          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:620:10: warning: unused variable 'ntsort' [-Wunused-variable]
BUILDSTDERR:   620 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
BUILDSTDERR:       |          ^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:620:36: warning: unused variable 'ntlookup' [-Wunused-variable]
BUILDSTDERR:   620 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
BUILDSTDERR:       |                                    ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:1838:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  1838 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
BUILDSTDERR:       |         ^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:1838:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  1838 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
BUILDSTDERR:       |                         ^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2253:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2253 |   MAKE_ELEMENT_5(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2288:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2288 |   MAKE_ELEMENT_5(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2316:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2316 |   MAKE_ELEMENT_5(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2337:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2337 |   MAKE_ELEMENT_5(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2149 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2150 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2151 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2152:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2152 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2351:3: note: in expansion of macro 'MAKE_ELEMENT_5'
BUILDSTDERR:  2351 |   MAKE_ELEMENT_5(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2473:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2473 |   MAKE_ELEMENT_7(1,1);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2578:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2578 |   MAKE_ELEMENT_7(2,2);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2668:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2668 |   MAKE_ELEMENT_7(3,3);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2743:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2743 |   MAKE_ELEMENT_7(4,4);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2803:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2803 |   MAKE_ELEMENT_7(5,5);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2847:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2847 |   MAKE_ELEMENT_7(6,6);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2168 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2169 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2170 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2171:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
BUILDSTDERR:  2171 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:2877:3: note: in expansion of macro 'MAKE_ELEMENT_7'
BUILDSTDERR:  2877 |   MAKE_ELEMENT_7(7,7);
BUILDSTDERR:       |   ^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT/pair_mgpt.cpp:576:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
BUILDSTDERR:   576 | static void tr_count(const double * restrict A,
BUILDSTDERR:       |             ^~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_stress_mop_profile.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/compute_temp_rotate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   326 |     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   328 |     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:330:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:370:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   370 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:385:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   385 |       fread(k[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:386:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   386 |       fread(multiplicity[i],sizeof(int),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_fourier.cpp:387:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   387 |       fread(shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_nharmonic.cpp:332:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |       fread(a[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp:329:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   329 |     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_quadratic.cpp:330:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   330 |     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:761:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   761 |     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:781:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   781 |       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:782:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   782 |       fread(phi_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:783:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   783 |       fread(phi_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:784:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   784 |       fread(phi_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:785:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   785 |       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:786:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   786 |       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:787:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   787 |       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:788:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   788 |       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:789:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   789 |       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_spherical.cpp:790:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   790 |       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_addtorque.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ave_correlate_long.cpp:506:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   506 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
BUILDSTDERR:       |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp:1026:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1026 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table.cpp:1027:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1027 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_electron_stopping.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp:1019:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1019 |     fread(&tabstyle,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/dihedral_table_cut.cpp:1020:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:  1020 |     fread(&tablength,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ffl.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_flow_gauss.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_gle.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_grem.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_filter_corotate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ipi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_imd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_nvk.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_rhok.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:2763:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:  2763 |   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
BUILDSTDERR:       |                      ^~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:39:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/memory.h:120:50: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |     bigint nbytes = ((bigint) sizeof(TYPE)) * n1*n2;
BUILDSTDERR:       |                                                  ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1798:7: note: 'dedup_size' was declared here
BUILDSTDERR:  1798 |   int dedup_size;
BUILDSTDERR:       |       ^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1997:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
BUILDSTDERR:       |                                                                               ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:1974:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1974 |     delete [] temp_limit_glove;
BUILDSTDERR:       |               ^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_bond_react.cpp:2032:54: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2032 |       if (stabilization_flag == 1) i_statted_tags[i] = 1;
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_pimd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_smd.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_srp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ti_spring.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_ees.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp:306:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   306 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_cossq.cpp:307:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_wall_region_ees.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:123:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   123 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:124:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   124 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:128:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   128 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:129:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   129 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:133:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   133 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:134:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   134 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:138:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   138 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:139:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:143:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   143 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:144:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   144 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:148:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   148 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:149:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   149 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:153:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   153 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:154:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   154 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:158:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   158 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:159:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   159 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:163:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   163 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:164:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   164 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:168:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   168 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:169:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   169 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:173:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   173 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:174:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:178:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   178 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:179:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   179 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:183:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:184:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   184 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:188:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   188 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:189:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: mps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:193:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   193 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:194:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   194 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:198:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   198 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:199:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   199 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:203:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   203 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:204:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   204 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:208:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   208 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:209:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   209 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:213:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   213 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:214:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   214 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:218:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   218 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:219:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:223:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   223 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:224:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   224 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:228:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   228 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/fix_ttm_mod.cpp:229:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |   fgets(linee,MAXLINE,fpr_2);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp:252:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   252 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_distance.cpp:253:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   253 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   334 |     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_fourier.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   335 |     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/improper_ring.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:308:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   308 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&a[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&rho[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:344:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_buck_mdf.cpp:347:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   347 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   222 |     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:222:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:462:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   462 |     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
BUILDSTDERR:       |                                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_agni.cpp:458:22: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   458 |       params[curparam].numeta = nwords-1;
BUILDSTDERR:       |                      ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |           fread(&rme[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:288:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   288 |           fread(&sigmae[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:289:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   289 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:316:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:317:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_diel.cpp:318:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:304:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   304 |           fread(&sigmae[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:305:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   305 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:331:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   332 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_coul_shield.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   333 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_drip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp:618:7: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   618 |   rc3 *= lconv;
BUILDSTDERR:       |   ~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_e3b.cpp:613:6: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |   e2 *= econv;
BUILDSTDERR:       |   ~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_edip_multi.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:308:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   308 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&hgauss[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&rmh[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&sigmah[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:344:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   344 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:345:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   345 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_gauss_cut.cpp:346:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   346 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_extep.cpp:22:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairExTeP::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairExTeP::SR_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairKolmogorovCrespiFull::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::KC_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:28:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'virtual void LAMMPS_NS::PairILPGrapheneHBN::init_style()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::ILP_neigh()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lebedeva_z.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:307:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   307 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:311:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |           fread(&aparm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:312:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |           fread(&bparm[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:313:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   313 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:314:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   314 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lennard_mdf.cpp:341:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   341 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_list.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:833:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   833 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   837 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   838 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:839:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   839 |           fread(&shift[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:840:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   840 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   872 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   873 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   874 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   875 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   876 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:877:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   877 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:878:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   878 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:969:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   969 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   970 |       offset[itype][jtype];
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   961 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:961:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   961 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:964:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   964 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   959 |       phicoul = prefactor*erfc;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:532:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   532 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:555:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   555 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
BUILDSTDERR:       |                                                      ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:558:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Jun2019/srmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: c/USER-MISC/pair_lj_expand_coul_long.cpp:558:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   558 |               table = vtable[itable] + fraction*dvtable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   198 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:315:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:321:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   321 |           fread(&cut_inner[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:322:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   322 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_mdf.cpp:349:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   349 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   493 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   494 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   495 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   496 |           fread(&cut_coul[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   497 |           fread(&scale[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   526 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   527 |     fread(&cut_coul_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:11: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   622 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~
BUILDSTDERR:   625 |       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   622 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   623 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   624 |       rsq*rcutlj2inv+
BUILDSTDERR:       |       ~~~~~~~~~~~~~~                                          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   617 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   615 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:13: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:13: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   617 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:13: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   615 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |           make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR:   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~
BUILDSTDERR:   280 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   270 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   268 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   278 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   279 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:444:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   444 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:450:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   450 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:480:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   480 |       fgets(line, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:644:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   644 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:647:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   647 |   fgets(line, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:653:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   653 |   fgets(line, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:660:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   660 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_spline.cpp:664:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   664 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:311:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:315:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   315 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:316:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   316 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:317:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:318:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   318 |           fread(&c[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:319:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |           fread(&rr[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:320:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:352:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   352 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:353:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   353 |     fread(&sscale,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:354:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   354 |     fread(&dscale,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:355:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   355 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_momb.cpp:356:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   356 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:277:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   277 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   281 |           fread(&d0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |           fread(&alpha[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |           fread(&r0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:284:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   311 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_morse_smooth_linear.cpp:312:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   312 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:473:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   473 |     fgets(line, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:605:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   605 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:611:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   611 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:617:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   617 |         fgets(line, MAXLINE, fp);
BUILDSTDERR:       |         ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_meam_sw_spline.cpp:621:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   621 |                 fgets(line, MAXLINE, fp);
BUILDSTDERR:       |                 ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:699:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   699 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:704:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   704 |           fread(&a0[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:705:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   705 |           fread(&cut[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:733:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   733 |     fread(&cut_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:734:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   734 |     fread(&bptype,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:735:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |     fread(&btype,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:736:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   736 |     fread(&min,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:737:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   737 |     fread(&midpoint,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_srp.cpp:738:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   738 |     fread(&exclude,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_grem.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp: In member function 'void LAMMPS_NS::TemperNPT::command(int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/temper_npt.cpp:292:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   292 |         fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
BUILDSTDERR:       |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   293 |                me_universe,partner,swap,my_set_temp,partner_set_temp,
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   294 |                pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
BUILDSTDERR:       |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:388:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   388 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:389:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   389 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:390:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   390 |     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:391:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   391 |     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:392:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   392 |     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:393:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   393 |     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:395:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   395 |     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:396:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   396 |     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:397:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   397 |     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:399:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   399 |     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:400:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   400 |     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:401:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   401 |     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_class2_p6.cpp:402:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   402 |     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC/pair_tersoff_table.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   336 |     fread(&k[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:337:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   337 |     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:338:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   338 |     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:180:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |         evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:165:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |     fpair = forcebuck6d * r32inv;
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:319:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   319 |     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:320:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   320 |     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:419:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   419 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   423 |           fread(&buck6d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   424 |           fread(&buck6d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   425 |           fread(&buck6d3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |           fread(&buck6d4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:427:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   427 |           fread(&alpha_ij[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:428:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   428 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |     fread(&vdwl_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   462 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   463 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   464 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:465:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   465 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:466:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   466 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:559:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   559 |     eng += phicoul;
BUILDSTDERR:       |     ~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:557:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   557 |     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
BUILDSTDERR:       |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:552:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   552 |     phibuck6d = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:188:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/dynamical_matrix.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:452:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   452 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   456 |           fread(&buck6d1[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   457 |           fread(&buck6d2[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   458 |           fread(&buck6d3[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:459:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   459 |           fread(&buck6d4[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:460:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   460 |           fread(&alpha_ij[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:461:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   461 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   495 |     fread(&vdwl_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   496 |     fread(&coul_smooth,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   497 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   498 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:499:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   499 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:500:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   500 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:501:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:42: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:213:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:207:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   207 |             evdwl = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:614:36: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   614 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:608:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |     phibuck6d = ebuck6d - offset[itype][jtype];
BUILDSTDERR:       |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_canonical_coloured.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_alloy_types.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_deformation_gradient.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_convex_hull_incremental.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_graph_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp:825:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   825 |     indxr[i] = irow;
BUILDSTDERR:       |     ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON/fix_phonon.cpp:815:16: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   815 |     ipiv[icol] += 1;
BUILDSTDERR:       |     ~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp:191:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
BUILDSTDERR:   191 |   if (atom_index < data->nlocal) {
BUILDSTDERR:       |       ~~~~~~~~~~~^~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/compute_ptm_atom.cpp:205:11: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
BUILDSTDERR:   205 |     if (j == atom_index)
BUILDSTDERR:       |         ~~^~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_index.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_initialize_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_normalize_vertices.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_polar.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_quat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_neighbour_ordering.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_structure_matcher.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/compute_spec_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qtb.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB/fix_qbmsst.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp: In member function 'void ptm_voro::voronoicell_base::add_memory_vorder(vc_class&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:213:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   213 |         for(j=0;j<current_vertex_order;j++) p1[j]=mem[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:213:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   213 |         for(j=0;j<current_vertex_order;j++) p1[j]=mem[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |                                                          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:219:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   219 |         for(j=0;j<current_vertex_order;j++) p1[j]=mec[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:219:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   219 |         for(j=0;j<current_vertex_order;j++) p1[j]=mec[j];while(j<i) p1[j++]=0;
BUILDSTDERR:       |                                                          ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp: In member function 'void ptm_voro::voronoicell_base::init_base(double, double, double, double, double, double)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:260:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
BUILDSTDERR:   260 |         for(int i=0;i<current_vertex_order;i++) mec[i]=0;up=0;
BUILDSTDERR:       |         ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM/ptm_voronoi_cell.cpp:260:58: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
BUILDSTDERR:   260 |         for(int i=0;i<current_vertex_order;i++) mec[i]=0;up=0;
BUILDSTDERR:       |                                                          ^~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pertype_parameters(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp:219:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   219 |       fscanf(pf,"%d %lg %lg %lg",&itype,&v1,&v2,&v3);
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_qeq_reax.cpp:513:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   513 |     qeq_time = t_end - t_start;
BUILDSTDERR:       |                ~~~~~~^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.cpp:543:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   543 |     data->timing.nbrs = t_end - t_start;
BUILDSTDERR:       |                         ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/fix_reaxc_species.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_allocate.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bond_orders.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_control.cpp:119:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   119 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_forces.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_init_md.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:54:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    54 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:57:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    57 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:76:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    76 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:88:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    88 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:93:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    93 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:94:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    94 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:95:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    95 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:148:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   148 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:174:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   174 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:193:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   193 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:212:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   212 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:232:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   232 |       fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:317:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   317 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:327:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   327 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   331 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   358 |       fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:479:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   479 |   fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:484:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   484 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:540:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   540 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:545:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   545 |     fgets(s,MAX_LINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:598:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   598 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:603:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   603 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:669:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   669 |   fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_ffield.cpp:679:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   679 |     fgets( s, MAX_LINE, fp );
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_io_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_list.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:40:16: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    40 |   for(i = 1; i < n; i++){
BUILDSTDERR:       |              ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:67:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    67 |   for( i = 2; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:71:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    71 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:75:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    75 |   for( i = 1; i < n-2; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:79:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    79 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:86:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:    86 |   for( i = 1; i < n; ++i ){
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:117:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   117 |   for( i = 1; i < n; ++i )
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:121:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   121 |   for( i = 1; i < n; ++i )
BUILDSTDERR:       |               ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:125:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   125 |   for( i = 0; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:130:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   130 |   for( i = 1; i < n-1; ++i )
BUILDSTDERR:       |               ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_lookup.cpp:135:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
BUILDSTDERR:   135 |   for( i = 1; i < n; ++i ){
BUILDSTDERR:       |               ~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_multi_body.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_reset_tools.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_system_props.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_nonbonded.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_tool_box.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_vector.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_torsion_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_valence_angles.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/reaxc_traj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:337:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   337 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:336:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:336:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   336 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:457:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   457 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:456:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   456 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_rigid_meso.cpp:456:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   456 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
BUILDSTDERR:       |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:706:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   706 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:675:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   675 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:644:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   644 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
BUILDSTDERR:       |                                             ~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD/fix_meso_move.cpp:174:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |     if (strcmp(arg[iarg],"units") == 0) {
BUILDSTDERR:       |                        ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_e_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_rho_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/compute_meso_t_atom.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/atom_vec_meso.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/fix_meso_stationary.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_heatconduction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_idealgas.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_rhosum.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_lj.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH/pair_sph_taitwater_morris.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_force_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_heat_flux_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_mol_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_pe_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY/compute_stress_tally.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_pressure_uef.cpp:150:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
BUILDSTDERR:       |                    ~~~~~~~~~~~^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/compute_temp_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:435:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   435 |   fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:438:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   438 |     fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:489:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   489 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:493:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   493 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:501:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   501 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:510:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   510 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:528:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   528 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:542:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   542 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:565:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:568:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:621:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   621 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:633:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   633 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:655:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   655 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:668:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   668 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:675:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   675 |       fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:695:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   695 |     fgets(ptr,MAXLINE,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:698:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   698 |     fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:708:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   708 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:719:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   719 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:722:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   722 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:727:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   727 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:735:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   735 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:738:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   738 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:745:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   745 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:748:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   748 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:758:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   758 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:761:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   761 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:766:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   766 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:792:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   792 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:795:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   795 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:803:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   803 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:813:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   813 |   fgets( ptr, MAXLINE, fp);
BUILDSTDERR:       |   ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:1459:43: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1459 |             ddij = aCoeff*(r- rc-nang) *(2+bCoeff*(r-rc-nang))*exp(bCoeff*r);
BUILDSTDERR:       |                                         ~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:1458:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1458 |           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
BUILDSTDERR:       |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:2594:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2594 |     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
BUILDSTDERR:       |                                                             ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ/pair_smtbq.cpp:2813:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2813 |     dt = t_end - t_init;
BUILDSTDERR:       |     ~~~^~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_npt_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nvt_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/dump_cfg_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/uef_utils.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF/fix_nh_uef.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:282:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   282 |     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:283:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   283 |     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:284:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   284 |     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:285:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   285 |     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:286:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   286 |     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_cross.cpp:287:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   287 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp:229:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   229 |     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/angle_mm3.cpp:230:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   230 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp:182:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   182 |     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/bond_mm3.cpp:183:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   183 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp:261:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_distharm.cpp:262:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp:261:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   261 |     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/improper_sqdistharm.cpp:262:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   262 |     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_data.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:525:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:532:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   566 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   567 |     fread(&truncw,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   570 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:571:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   571 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:660:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   660 |     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
BUILDSTDERR:       |               ~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:694:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   694 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:677:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   677 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   678 |         offset[itype][jtype];
BUILDSTDERR:       |         ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:668:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:671:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   671 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   666 |       phicoul = prefactor*erfc1;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:685:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   685 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             ecoul = prefactor*erfc1;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:191:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:213:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   213 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:196:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   196 |           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   197 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:204:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:188:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:188:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:525:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   525 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
BUILDSTDERR:       |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   529 |           fread(&epsilon[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   530 |           fread(&sigma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:531:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   531 |           fread(&gamma[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:532:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   532 |           fread(&cut_lj[i][j],sizeof(double),1,fp);
BUILDSTDERR:       |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   565 |     fread(&cut_lj_global,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   566 |     fread(&cut_coul,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   567 |     fread(&truncw,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   568 |     fread(&offset_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   569 |     fread(&mix_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   570 |     fread(&tail_flag,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:571:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   571 |     fread(&ncoultablebits,sizeof(int),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:572:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   572 |     fread(&tabinner,sizeof(double),1,fp);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:679:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   679 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:695:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   695 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:679:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   679 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:670:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   670 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                            ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:670:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   670 |       table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:673:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   673 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   668 |       phicoul = prefactor*erfc1;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:686:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   686 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:199:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-stable_5Junmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: 2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   189 |             ecoul = prefactor*erfc1;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   198 |           ecoul += prefactor2*erfc2*factor_coul;
BUILDSTDERR:       |                    ~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:194:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   194 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:215:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   215 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:199:23: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   199 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
BUILDSTDERR:       |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:206:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:191:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:191:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                  ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/thr_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/domain_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_delta_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_periodic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_squared_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_sdk_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_dipole_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_cosine_shift_exp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_fourier_simple_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/angle_quartic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_gromos_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp:140:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_omp.cpp:140:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   140 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
BUILDSTDERR:       |                  ~~~~~~~~~~~~~~~~~^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_nonlinear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_quartic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_charmm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_helix_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_opls_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_gravity_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_nharmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_quadratic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/dihedral_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/fix_neigh_history.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_neigh_history_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP13post_neighborEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP19pre_exchange_newtonEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP21pre_exchange_onesidedEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS18FixNeighHistoryOMP22pre_exchange_no_newtonEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nve_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sllod_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_sphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_npt_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nph_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nvt_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_comb_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_peri_neigh_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nve_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nph_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nvt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_npt_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:497:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   497 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:492:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   492 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:476:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   476 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:674:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   674 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_omp.cpp:661:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   661 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_qeq_reax_omp.cpp:351:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   351 |     qeq_time = t_end - t_start;
BUILDSTDERR:       |                ~~~~~~^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:438:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:433:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   433 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:418:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   418 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:612:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   612 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_small_omp.cpp:599:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   599 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |       p = 2.0 - p;
BUILDSTDERR:       |       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |       p = 2.0 - p;
BUILDSTDERR:       |       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       pd = -pd;
BUILDSTDERR:       |       ^~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_harmonic_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_umbrella_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_cossq_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/respa_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_fourier_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/improper_ring_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/ewald_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_cg_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_cg_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS15NPairFullBinOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:50:10: note: 'tagprev' was declared here
BUILDSTDERR:    50 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:49:43: note: 'iatom' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_omp.cpp:49:38: note: 'imol' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_tip4p_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairFullBinAtomonlyOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS20NPairFullBinGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   119 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   120 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:43: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   118 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:38: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS17NPairFullMultiOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   121 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:50:46: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_multi_omp.cpp:50:41: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS15NPairFullNsqOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:51:36: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_omp.cpp:51:31: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS20NPairFullNsqGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:36: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:31: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS29NPairHalfBinAtomonlyNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalfBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   117 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   118 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   116 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfBinNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   126 |                                      onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   127 |                                      tag[j]-tagprev);
BUILDSTDERR:       |                                      ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   125 |                 which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS21NPairHalfBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   150 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   151 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:43: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:149:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   149 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:38: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS24NPairHalfBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   123 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   124 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
BUILDSTDERR:    50 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   122 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
BUILDSTDERR:    49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
BUILDSTDERR:       |                                      ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS24NPairHalfMultiNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   124 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   125 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   123 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfMultiNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   133 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   134 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   132 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairHalfMultiNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   157 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   158 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
BUILDSTDERR:    51 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   156 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
BUILDSTDERR:    50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalfNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   113 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   114 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
BUILDSTDERR:    53 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
BUILDSTDERR:    52 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   112 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
BUILDSTDERR:    52 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfNsqNewtoffGhostOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   121 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   122 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
BUILDSTDERR:    56 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
BUILDSTDERR:    55 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   120 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
BUILDSTDERR:    55 |   int i,j,n,itype,jtype,which,imol,iatom;
BUILDSTDERR:       |                               ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS21NPairHalfNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   131 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   132 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
BUILDSTDERR:    52 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
BUILDSTDERR:       |                                              ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   130 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
BUILDSTDERR:    51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
BUILDSTDERR:       |                                         ^~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfRespaBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   148 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   149 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
BUILDSTDERR:    56 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
BUILDSTDERR:    55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   166 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    58 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:95:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    95 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:192:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   192 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:191:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS29NPairHalfRespaBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   155 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   156 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    94 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfRespaBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   194 |                                    onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   195 |                                    tag[j]-tagprev);
BUILDSTDERR:       |                                    ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
BUILDSTDERR:    55 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                      ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   193 |               which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                 ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   167 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
BUILDSTDERR:    54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                        ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   212 |             if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                       ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:94:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    94 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:238:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:237:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS27NPairHalfRespaNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   145 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   146 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
BUILDSTDERR:    57 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   144 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                          ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
BUILDSTDERR:    56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                 ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   161 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    59 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:98:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    98 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:186:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:185:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfSizeBinNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfRespaNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   163 |                                  onemols[imol]->nspecial[iatom],
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   164 |                                  tag[j]-tagprev);
BUILDSTDERR:       |                                  ~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
BUILDSTDERR:    58 |   tagint tagprev;
BUILDSTDERR:       |          ^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                         ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   162 |             which = find_special(onemols[imol]->special[iatom],
BUILDSTDERR:       |                                              ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                                    ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
BUILDSTDERR:    57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
BUILDSTDERR:       |                                           ^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (which == 0) neighptr_middle[n_middle++] = j;
BUILDSTDERR:       |                                                     ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
BUILDSTDERR:    60 |   int *neighptr,*neighptr_inner,*neighptr_middle;
BUILDSTDERR:       |                                  ^~~~~~~~~~~~~~~
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         errorflag = 2;
BUILDSTDERR:       |         ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:99:16: note: 'ipage_middle' was declared here
BUILDSTDERR:    99 |   MyPage<int> *ipage_middle;
BUILDSTDERR:       |                ^~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:205:26: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   205 |       numneigh_middle[i] = n_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: note: 'numneigh_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                      ^~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:204:28: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       firstneigh_middle[i] = neighptr_middle;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: note: 'firstneigh_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |                                        ^~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:23: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   203 |       ilist_middle[i] = i;
BUILDSTDERR:       |       ~~~~~~~~~~~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: note: 'ilist_middle' was declared here
BUILDSTDERR:    86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
BUILDSTDERR:       |        ^~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS25NPairHalfSizeBinNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS28NPairHalfSizeBinNewtonTriOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS26NPairHalfSizeNsqNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp:18:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS25NPairHalfSizeNsqNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newton_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS22NPairHalffullNewtonOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/neigh_list.h:18,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/npair_halffull_newtoff_omp.cpp:17:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS23NPairHalffullNewtoffOmp5buildEPNS_9NeighListE._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_beck_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   155 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_debye_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_dsf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_wolf_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_dpd_tstat_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj96_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:148:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:148:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   148 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   145 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   157 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   160 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                  ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_expand_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   146 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:181:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:181:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |             evdwl += ljsw5[itype][jtype];
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:152:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   152 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:152:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   152 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   150 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_ufm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:188:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   185 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp:147:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               (sw3i[jtype] + sw4i[jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_zbl_omp.cpp:147:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   147 |               (sw3i[jtype] + sw4i[jtype]*t);
BUILDSTDERR:       |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_resquared_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gayberne_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_poly_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_brownian_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:208:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |         f[j].z -= delz*fpair;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_colloid_omp.cpp:204:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   204 |       fztmp += delz*fpair;
BUILDSTDERR:       |                ~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   254 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   259 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   254 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   259 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   170 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   165 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   164 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   168 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   176 |             table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   169 |             ecoul = prefactor*egamma;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   171 |             table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   191 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   195 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   188 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   181 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   190 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   183 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   461 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   461 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   463 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMPmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   469 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   436 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   383 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   379 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninmake[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: itialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   438 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   440 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   411 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   352 |             f[iH1].x += fHx;
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_adp_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_airebo.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.h:22,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS13PairAIREBOOMP14REBO_neigh_thrEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:999:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   999 |             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
BUILDSTDERR:       |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   569 |           fpair = dC*dwij / rij;
BUILDSTDERR:       |                   ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |                    ~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |                    ~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:613:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   613 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:608:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   608 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:584:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   584 |           fpair2 = dC*wikS*dwkjS / rkjS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:580:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   580 |           fpair1 = dC*dwikS*wkjS / rikS;
BUILDSTDERR:       |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:631:18: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   631 |           f[atomm][0] += fm[0];
BUILDSTDERR:       |                  ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_omp.cpp:595:18: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   595 |           f[atomk][0] -= fi[0] + fj[0];
BUILDSTDERR:       |                  ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_airebo_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp
BUILDSTDERR: In file included from /builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY/pair_comb.h:24,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.h:22,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_comb_omp.cpp:16:
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h: In function '_ZN9LAMMPS_NS11PairCombOMP15Short_neigh_thrEv._omp_fn.0':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:225:7: warning: 'ptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |       pages[i] = (T *) ptr;
BUILDSTDERR:       |       ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/my_page.h:222:13: note: 'ptr' was declared here
BUILDSTDERR:   222 |       void *ptr;
BUILDSTDERR:       |             ^~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   167 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   187 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   139 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   140 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   141 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   142 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   167 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   189 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_rebo_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eim_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_sw_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   481 |           fpair += D_i * rhojp * t1;
BUILDSTDERR:       |                    ~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_vashishta_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   341 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   345 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   404 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   400 |             f[jH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   375 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   371 |             f[jH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_lps_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_peri_pmb_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:240:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:237:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   244 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:240:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |               ecoul = qi*qj * table;
BUILDSTDERR:       |                       ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   245 |               ecoul += factor_e * dcoul;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:237:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   250 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
      |                  make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR:      ~~~~~~~^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:201:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   201 |             if (j != di_closest){
BUILDSTDERR:       |             ^~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:208:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |               dcoul = qqrd2e * dqi * dqj / r;
BUILDSTDERR:       |                       ~~~~~~~^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:158:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   158 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:158:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   158 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   154 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:180:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                                    ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:180:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
BUILDSTDERR:       |                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   173 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
BUILDSTDERR:       |             ^~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   174 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   159 |     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR:   160 |                                       fxtmp,fytmp,fztmp,
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   161 |                                       delx,dely,delz,thr);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_agni_omp.cpp:159:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   419 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   415 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   360 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   356 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   390 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   331 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   327 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_coul_diel_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_gauss_cut_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_edip_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   277 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   287 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               rsq*rcutlj2inv+
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                          
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_meam_spline_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_nh_asphere_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.cpp:226:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   226 |     data->timing.nbrs = t_end - t_start;
BUILDSTDERR:       |                         ~~~~~~^~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_tersoff_table_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:779:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   779 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:774:25: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   774 |         lbonus[line[i]].theta = theta;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:758:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   758 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:956:38: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   956 |         inertiaatom = tbonus[tri[i]].inertia;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/fix_rigid_nh_omp.cpp:943:38: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   943 |         shape = ebonus[ellipsoid[i]].shape;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_bonds_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:56:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:    56 |   MPI_Comm comm;
BUILDSTDERR:       |            ^~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'void InitializeOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, output_controls*, mpi_datatypes*, int)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:134:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   134 |     snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   135 |     "System could not be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                      ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 58 and 1081 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:140:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   140 |     snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   141 |     "Sim_data couldn't be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                       ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 59 and 1082 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:153:41: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   153 |       snprintf( errmsg, 512, "Error on: %s. "
BUILDSTDERR:       |                                         ^~
BUILDSTDERR:   154 |       "System could not be initialized! Terminating.", msg );
BUILDSTDERR:       |                                                        ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 58 and 1081 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:159:39: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   159 |     snprintf( errmsg, 512, "Error on: %s"
BUILDSTDERR:       |                                       ^~
BUILDSTDERR:   160 |     "Could not open output files! Terminating.", msg );
BUILDSTDERR:       |                                                  ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 52 and 1075 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:166:41: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 502 [-Wformat-truncation=]
BUILDSTDERR:   166 |       snprintf( errmsg, 512, "Error on: %s."
BUILDSTDERR:       |                                         ^~
BUILDSTDERR:   167 |       " Couldn't create lookup table! Terminating.", msg );
BUILDSTDERR:       |                                                      ~~~
BUILDSTDERR: In file included from /usr/include/stdio.h:867,
BUILDSTDERR:                  from /usr/include/c++/9/cstdio:42,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/lammps.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pointers.h:26,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/pair.h:17,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC/pair_reaxc.h:33,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_reaxc_omp.h:23,
BUILDSTDERR:                  from /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_init_md_omp.cpp:29:
BUILDSTDERR: /usr/include/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 55 and 1078 bytes into a destination of size 512
BUILDSTDERR:    67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:       |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:    68 |        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:       |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_forces_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_multi_body_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/reaxc_valence_angles_omp.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_morse_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_ufm_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |                 ecoul = prefactor*erfc;
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   206 |                 ecoul = prefactor*erfc;
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                 ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   208 |                 table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   175 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   177 |               table = etable[itable] + fraction*detable[itable];
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   432 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   432 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   434 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |             f[jH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   350 |             f[iH2][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   346 |             f[iH1][0] += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             f[jH2][0] += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_alloy_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_eam_fs_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/fix_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pppm_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_beck_gpu.cpp:240:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   240 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1335 |             f[jH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1331 |             f[jH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1304 |             f[iH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1300 |             f[iH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1597 |             f[jH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1593 |             f[jH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1566 |             f[iH2].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1562 |             f[iH1].x += fHx;
BUILDSTDERR:       |             ~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1075 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1073 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ^~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1081:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1081 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1010 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   991 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1052 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1048 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   995 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2033:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2033 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
BUILDSTDERR:       |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1959 |               vlist[n++] = iH2;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  2001 |             f[jH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1997 |             f[jH1].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1931 |             f[iH2].x += fHx;
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:  1927 |             f[iH1].x += fHx;
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_gpu.cpp:242:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   242 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   249 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_cut_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_debye_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_dsf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_gpu.cpp:405:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   405 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_dpd_tstat_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gauss_gpu.cpp:230:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   230 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj96_cut_gpu.cpp:226:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   226 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:234:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   234 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
BUILDSTDERR:       |                ~~~~~^~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:231:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   231 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cubic_gpu.cpp:238:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   238 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_gpu.cpp:236:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   236 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   248 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   249 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   252 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   255 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   256 |             offset[itype][jtype];
BUILDSTDERR:       |             ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   269 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   277 |                     offset[itype][jtype];
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
BUILDSTDERR:       |                                  ~~~~~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_gpu.cpp:239:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   239 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
BUILDSTDERR:       |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:40: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   241 |               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_mie_cut_gpu.cpp:225:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   225 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_morse_gpu.cpp:221:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   221 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_soft_gpu.cpp:232:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   232 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   333 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                                           ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   333 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
BUILDSTDERR:       |                ~~~~~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:330:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   330 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_table_gpu.cpp:338:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_ufm_gpu.cpp:235:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_gpu.cpp:224:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   224 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp:232:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   232 |                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_zbl_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_resquared_gpu.cpp:312:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   312 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   313 |                                       fforce[2],-r12[0],-r12[1],-r12[2]);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_gayberne_gpu.cpp:337:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   337 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],fforce[2],
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   338 |                                       -r12[0],-r12[1],-r12[2]);
BUILDSTDERR:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_gpu.cpp:223:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   223 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   272 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   273 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   277 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   276 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   235 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp:302:15: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   302 |       f[i][2] += delz*fpair;
BUILDSTDERR:       |       ~~~~~~~~^~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_colloid_gpu.cpp:298:24: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   298 |       if (eflag) evdwl *= factor_lj;
BUILDSTDERR:       |                  ~~~~~~^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   306 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   308 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   325 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   330 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   329 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   284 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   285 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   353 |               ecoul += qtmp*r3inv*pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   351 |               ecoul += -q[j]*r3inv*pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                                      ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   349 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   358 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   359 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                    ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                                     ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                            ~~~~~~~~~~~~~~~^~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   412 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
BUILDSTDERR:       |                                                            ~~^~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   409 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
BUILDSTDERR:       |                             ~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   417 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   418 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:282:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   282 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
BUILDSTDERR:       |                 ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_born_coul_long_gpu.cpp:286:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   286 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   274 |             ecoul = prefactor*erfc;
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   275 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                                            ~~~~~~~~~~~~~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   279 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:281:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   281 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:281:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:283:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   317 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   322 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   319 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   326 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
BUILDSTDERR:       |                                            ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   305 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   310 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   314 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   315 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   307 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   283 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   278 |               ecoul = prefactor*egamma;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   287 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   288 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   280 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:34: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   293 |         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
BUILDSTDERR:       |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   280 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_sw_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_alloy_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:376:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   376 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:377:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   377 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:378:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   378 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:379:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   379 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:404:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   404 |     fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |     ~~~~~^~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_eam_fs_gpu.cpp:426:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   426 |       fgets(line,MAXLINE,fptr);
BUILDSTDERR:       |       ~~~~~^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_mod_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_tersoff_zbl_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_vashishta_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 1; int <anonymous> = 1]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 1; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute(int, int, int*, int*, int**) [with int <anonymous> = 0; int <anonymous> = 0]':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:338:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   338 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
BUILDSTDERR:       |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT/pair_lj_long_coul_long_opt.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   311 |               ecoul = prefactor*erfc;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   316 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
BUILDSTDERR:       |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   320 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   321 |               offset[itype][jtype];
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   313 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   313 |               table = etable[itable] + fraction*detable[itable];
BUILDSTDERR:       |                                    ^
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
BUILDSTDERR:       |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~
BUILDSTDERR:   388 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~^~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
BUILDSTDERR:       |                        ~~~~~~~~~~~~^~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   380 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   378 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
BUILDSTDERR:       |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                                              ~~~^~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   376 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
BUILDSTDERR:       |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: /builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:71: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:   385 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
BUILDSTDERR:       |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
BUILDSTDERR:   386 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
BUILDSTDERR:       |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:   387 |               rsq*rcutlj2inv +
BUILDSTDERR:       |               ~~~~~~~~~~~~~~                                           
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Linking CXX shared library liblammps_openmpi.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -shared -Wl,-soname,liblammps_openmpi.so.0 -o liblammps_openmpi.so.0 @CMakeFiles/lammps.dir/objects1.rsp libmpi_stubs.a -lfftw3 -lpython3.7m -ljpeg -lpng -lz -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a libcolvars.a libh5md.a libgpu.a -lopenblas -lhdf5 -lsz -lz -ldl -lm -lOpenCL 
/usr/bin/cmake -E cmake_symlink_library liblammps_openmpi.so.0 liblammps_openmpi.so.0 liblammps_openmpi.so
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Built target lammps
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target lmp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/STUBS -I/usr/include/python3.7m -I/usr/include/kim-api -I/usr/lib64/kim-api/mod -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/BODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PERI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/SRD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/KIM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/OPT -I/builddir/build/BUILD/lammps-stable_5Jun2019/src/GPU -I/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/poems -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/atc -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_5Jun2019/lib/h5md/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Linking CXX executable lmp_openmpi
/usr/bin/cmake -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_5Jun2019/src/main.cpp.o  -o lmp_openmpi -Wl,-rpath,/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi: liblammps_openmpi.so.0 libmpi_stubs.a -lfftw3 -lpython3.7m -ljpeg -lpng -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Built target lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles 0
+ popd
~/build/BUILD/lammps-stable_5Jun2019
+ test -n openmpi
+ module unload mpi/openmpi-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-aarch64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ unset LD_LIBRARY_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ unset LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ unset MPI_BIN
BUILDSTDERR: ++ unset MPI_COMPILER
BUILDSTDERR: ++ unset MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ unset MPI_HOME
BUILDSTDERR: ++ unset MPI_INCLUDE
BUILDSTDERR: ++ unset MPI_LIB
BUILDSTDERR: ++ unset MPI_MAN
BUILDSTDERR: ++ unset MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ unset MPI_SUFFIX
BUILDSTDERR: ++ unset MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ unset _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.3g0d7h
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64
BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64
+ cd lammps-stable_5Jun2019
+ . /etc/profile.d/modules.sh
BUILDSTDERR: ++ '[' -z '' ']'
BUILDSTDERR: ++ '[' -z /usr/share/modulefiles ']'
BUILDSTDERR: ++ PS_CMD=/usr/bin/ps
BUILDSTDERR: ++ '[' '!' -x /usr/bin/ps ']'
BUILDSTDERR: ++ EXPR_CMD=/usr/bin/expr
BUILDSTDERR: ++ '[' '!' -x /usr/bin/expr ']'
BUILDSTDERR: ++ BASENAME_CMD=/usr/bin/basename
BUILDSTDERR: ++ '[' '!' -x /usr/bin/basename ']'
BUILDSTDERR: +++ /usr/bin/ps -p 26462 -ocomm=
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/expr sh : '-*\(.*\)'
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/basename sh
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: ++ '[' -f /usr/share/lmod/lmod/init/sh ']'
BUILDSTDERR: ++ . /usr/share/lmod/lmod/init/sh
BUILDSTDERR: +++ LMOD_PKG=/usr/share/lmod/lmod
BUILDSTDERR: +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
BUILDSTDERR: +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
BUILDSTDERR: +++ MODULESHOME=/usr/share/lmod/lmod
BUILDSTDERR: +++ export LMOD_CMD
BUILDSTDERR: +++ export LMOD_PKG
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: +++ export MODULESHOME
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ for mpi in '' mpich openmpi
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64 'INSTALL=/usr/bin/install -p' -C serial
make: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/cmake -S/builddir/build/BUILD/lammps-stable_5Jun2019/cmake -B/builddir/build/BUILD/lammps-stable_5Jun2019/serial --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/msi2lmp.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Built target msi2lmp
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/mpi_stubs.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  1%] Built target mpi_stubs
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/poems.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/poems.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  4%] Built target poems
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/colvars.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/colvars.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[  6%] Built target colvars
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/atc.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/atc.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Built target atc
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/cslib.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/cslib.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Built target cslib
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/h5md.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/h5md.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Built target h5md
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/ocl_get_devices.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 11%] Built target ocl_get_devices
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/gpu.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Built target gpu
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/serial/styles" -P /builddir/build/BUILD/lammps-stable_5Jun2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[ 19%] Built target gitversion
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/lammps.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/lammps.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Built target lammps
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles/lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[2]: Nothing to be done for 'CMakeFiles/lmp.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
[100%] Built target lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/serial/CMakeFiles 0
/usr/bin/make -f CMakeFiles/Makefile2 preinstall
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
make[1]: Nothing to be done for 'preinstall'.
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/liblammps.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/liblammps.so
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/pkgconfig/liblammps.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/cmake/Modules/FindLAMMPS.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/lmp
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/lmp" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/man1/lmp.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/man1/msi2lmp.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.AuO
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.cho
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Au_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNC.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1989.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH_taper.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_mishin1.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_u6.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/WL.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlO.streitz
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN_tersoff.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1997.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_smf7.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ag_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.b.meam.sw.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ge.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_He_JW2013.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaAs.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CoAl.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BN.extep
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.KC-full
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni.adp
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1994.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuTa.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.eim
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiCGe.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTe.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.budzien
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.edip
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/README
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si_1.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_Erhart-Albe.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN_sw.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.gw
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTeSe.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/InP.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/C.lcbop
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/FeCr.cdeam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.Al
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/library.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff.mod
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1990.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/C.drip
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ti.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuNi.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/charmm22.cmap
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff.modc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuH.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/VFe_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.FC
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlO.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Pd_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.gw.zbl
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_jnp.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/He_He_JW2013.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.comb
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.rdx
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CCu_v2.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/TiO.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/lib.comb3
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/README.reax
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.airebo-m
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.comb3
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1990.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.adp
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Pt_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_prb.agni
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNCH.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNCH-old.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.mattsson
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.Lebedeva
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni_smf7.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.rebo
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTe.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuTa_eam.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.airebo
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.edip
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_jpc.agni
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.ci-reax.CH
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mg_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si_2.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/charmm36.cmap
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1994.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.AB
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.lg
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cvff.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/oplsaa.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cvff_aug.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/clayff.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/README
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cff91.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff_templates.dat
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff.rlb
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/compass_published.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/etc/profile.d/lammps.sh
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/etc/profile.d/lammps.csh
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib/python3.7/site-packages/lammps.py
make: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
+ for mpi in '' mpich openmpi
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64 'INSTALL=/usr/bin/install -p' -C mpich
make: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/cmake -S/builddir/build/BUILD/lammps-stable_5Jun2019/cmake -B/builddir/build/BUILD/lammps-stable_5Jun2019/mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/msi2lmp.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Built target msi2lmp
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/mpi_stubs.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  1%] Built target mpi_stubs
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/poems.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/poems.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  4%] Built target poems
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/colvars.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/colvars.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[  6%] Built target colvars
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/atc.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/atc.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Built target atc
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/cslib.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/cslib.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Built target cslib
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/h5md.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/h5md.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Built target h5md
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/ocl_get_devices.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 11%] Built target ocl_get_devices
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/gpu.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/gpu.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Built target gpu
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/mpich/styles" -P /builddir/build/BUILD/lammps-stable_5Jun2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[ 19%] Built target gitversion
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/lammps.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/lammps.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Built target lammps
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles/lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[2]: Nothing to be done for 'CMakeFiles/lmp.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
[100%] Built target lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/mpich/CMakeFiles 0
/usr/bin/make -f CMakeFiles/Makefile2 preinstall
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
make[1]: Nothing to be done for 'preinstall'.
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/lib/liblammps_mpich.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/lib/liblammps_mpich.so
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/lib/pkgconfig/liblammps_mpich.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/cmake/Modules/FindLAMMPS_mpich.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/lmp_mpich
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/lmp_mpich" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/mpich-aarch64/man1/lmp_mpich.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/mpich-aarch64/man1/msi2lmp.1
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.AuO
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.cho
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Au_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1989.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH_taper.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_mishin1.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_u6.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/WL.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlO.streitz
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN_tersoff.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1997.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ag_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.b.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ge.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaAs.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CoAl.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BN.extep
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.KC-full
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1994.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuTa.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.eim
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiCGe.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTe.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.budzien
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si_1.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_Erhart-Albe.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN_sw.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.gw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTeSe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/InP.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/C.lcbop
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/FeCr.cdeam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.Al
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/library.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff.mod
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1990.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/C.drip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ti.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuNi.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/charmm22.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff.modc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuH.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/VFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.FC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlO.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Pd_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.gw.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_jnp.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/He_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.comb
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.rdx
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CCu_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/TiO.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/lib.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/README.reax
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.airebo-m
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1990.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Pt_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_prb.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNCH.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNCH-old.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.mattsson
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.Lebedeva
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.rebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuTa_eam.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.airebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_jpc.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.ci-reax.CH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mg_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si_2.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/charmm36.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1994.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.AB
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.lg
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cvff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/oplsaa.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cvff_aug.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/clayff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cff91.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff_templates.dat
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff.rlb
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/compass_published.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/etc/profile.d/lammps.sh
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/etc/profile.d/lammps.csh
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib/python3.7/site-packages/lammps.py
make: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
+ for mpi in '' mpich openmpi
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64 'INSTALL=/usr/bin/install -p' -C openmpi
make: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/cmake -S/builddir/build/BUILD/lammps-stable_5Jun2019/cmake -B/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/msi2lmp.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Built target msi2lmp
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/mpi_stubs.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  1%] Built target mpi_stubs
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/poems.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/poems.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  4%] Built target poems
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/colvars.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/colvars.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[  6%] Built target colvars
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/atc.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/atc.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Built target atc
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/cslib.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/cslib.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Built target cslib
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/h5md.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/h5md.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Built target h5md
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/ocl_get_devices.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 11%] Built target ocl_get_devices
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/gpu.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Built target gpu
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/styles" -P /builddir/build/BUILD/lammps-stable_5Jun2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[ 19%] Built target gitversion
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/lammps.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/lammps.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Built target lammps
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/cmake /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles/lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[2]: Nothing to be done for 'CMakeFiles/lmp.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
[100%] Built target lmp
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi/CMakeFiles 0
/usr/bin/make -f CMakeFiles/Makefile2 preinstall
make[1]: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
make[1]: Nothing to be done for 'preinstall'.
make[1]: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/lib/liblammps_openmpi.so
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/lib/pkgconfig/liblammps_openmpi.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/cmake/Modules/FindLAMMPS_openmpi.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/lmp_openmpi
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/lmp_openmpi" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/openmpi-aarch64/man1/lmp_openmpi.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/openmpi-aarch64/man1/msi2lmp.1
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.AuO
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.cho
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Au_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1989.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH_taper.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_mishin1.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_u6.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/WL.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlO.streitz
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN_tersoff.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1997.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ag_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.b.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ge.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaAs.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CoAl.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BN.extep
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.KC-full
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1994.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuTa.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.eim
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiCGe.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTe.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.budzien
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si_1.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_Erhart-Albe.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN_sw.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.gw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTeSe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/InP.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/C.lcbop
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/FeCr.cdeam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.Al
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/library.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff.mod
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1990.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/C.drip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ti.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuNi.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/charmm22.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff.modc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuH.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/VFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.FC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlO.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Pd_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.gw.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_jnp.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/He_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.comb
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.rdx
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CCu_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/TiO.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/lib.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/README.reax
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.airebo-m
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiC_1990.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/AlCu.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Pt_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_prb.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNCH.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/BNCH-old.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.mattsson
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CC.Lebedeva
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/GaN.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.rebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CdTe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CuTa_eam.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ni.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/CH.airebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Al_jpc.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.ci-reax.CH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Mg_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Si_2.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/charmm36.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/SiO.1994.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Cu_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.AB
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/ffield.reax.lg
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/potentials/Ta4.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cvff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/oplsaa.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cvff_aug.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/clayff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/cff91.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff_templates.dat
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/pcff.rlb
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/lammps/frc_files/compass_published.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/etc/profile.d/lammps.sh
-- Installing: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/etc/profile.d/lammps.csh
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib/python3.7/site-packages/lammps.py
make: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
removed '/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/msi2lmp'
removed '/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/msi2lmp'
removed '/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/mpich-aarch64/man1/msi2lmp.1'
removed '/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/openmpi-aarch64/man1/msi2lmp.1'
+ rm -v /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/msi2lmp /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/msi2lmp /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/mpich-aarch64/man1/msi2lmp.1 /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/man/openmpi-aarch64/man1/msi2lmp.1
+ /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 20190605-3.fc30 --unique-debug-suffix -20190605-3.fc30.aarch64 --unique-debug-src-base lammps-20190605-3.fc30.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/lammps-stable_5Jun2019
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/lmp_openmpi
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/lmp_mpich
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/lib/liblammps_mpich.so.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/bin/lmp_openmpi
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/bin/lmp_mpich
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/mpich/lib/liblammps_mpich.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/msi2lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/msi2lmp
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/liblammps.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib64/liblammps.so.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/bin/lmp
/usr/lib/rpm/sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match.
BUILDSTDERR: 69964 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 0
Bytecompiling .py files below /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/lib/python3.7 using /usr/bin/python3.7
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.lwbomj
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ . /etc/profile.d/modules.sh
BUILDSTDERR: ++ '[' -z '' ']'
BUILDSTDERR: ++ '[' -z /usr/share/modulefiles ']'
BUILDSTDERR: ++ PS_CMD=/usr/bin/ps
BUILDSTDERR: ++ '[' '!' -x /usr/bin/ps ']'
BUILDSTDERR: ++ EXPR_CMD=/usr/bin/expr
BUILDSTDERR: ++ '[' '!' -x /usr/bin/expr ']'
BUILDSTDERR: ++ BASENAME_CMD=/usr/bin/basename
BUILDSTDERR: ++ '[' '!' -x /usr/bin/basename ']'
BUILDSTDERR: +++ /usr/bin/ps -p 31476 -ocomm=
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/expr sh : '-*\(.*\)'
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: +++ /usr/bin/basename sh
BUILDSTDERR: ++ my_shell=sh
BUILDSTDERR: ++ '[' -f /usr/share/lmod/lmod/init/sh ']'
BUILDSTDERR: ++ . /usr/share/lmod/lmod/init/sh
BUILDSTDERR: +++ LMOD_PKG=/usr/share/lmod/lmod
BUILDSTDERR: +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
BUILDSTDERR: +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
BUILDSTDERR: +++ MODULESHOME=/usr/share/lmod/lmod
BUILDSTDERR: +++ export LMOD_CMD
BUILDSTDERR: +++ export LMOD_PKG
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: +++ export MODULESHOME
BUILDSTDERR: +++ export LMOD_DIR
BUILDSTDERR: ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ for mpi in '' mpich openmpi
+ test -n ''
+ make -C serial -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
Running tests...
/usr/bin/ctest --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_5Jun2019/serial
      Start  1: test_core_balance_001_serial
 1/54 Test  #1: test_core_balance_001_serial ..........   Passed    0.29 sec
      Start  2: test_core_balance_002_serial
 2/54 Test  #2: test_core_balance_002_serial ..........   Passed    0.27 sec
      Start  3: test_core_balance_003_serial
 3/54 Test  #3: test_core_balance_003_serial ..........   Passed    0.27 sec
      Start  4: test_core_balance_004_serial
 4/54 Test  #4: test_core_balance_004_serial ..........   Passed    0.27 sec
      Start  5: test_core_balance_005_serial
 5/54 Test  #5: test_core_balance_005_serial ..........   Passed    0.27 sec
      Start  6: test_core_balance_006_serial
 6/54 Test  #6: test_core_balance_006_serial ..........   Passed    0.27 sec
      Start  7: test_core_comm_style_001_serial
 7/54 Test  #7: test_core_comm_style_001_serial .......   Passed    0.27 sec
      Start  8: test_core_comm_style_002_serial
 8/54 Test  #8: test_core_comm_style_002_serial .......   Passed    0.27 sec
      Start  9: test_core_displace_atoms_000_serial
 9/54 Test  #9: test_core_displace_atoms_000_serial ...   Passed    1.60 sec
      Start 10: test_core_displace_atoms_001_serial
10/54 Test #10: test_core_displace_atoms_001_serial ...   Passed    1.61 sec
      Start 11: test_core_displace_atoms_002_serial
11/54 Test #11: test_core_displace_atoms_002_serial ...   Passed    1.61 sec
      Start 12: test_core_empty_000_serial
12/54 Test #12: test_core_empty_000_serial ............   Passed    0.05 sec
      Start 13: test_core_empty_001_serial
13/54 Test #13: test_core_empty_001_serial ............   Passed    0.04 sec
      Start 14: test_core_empty_002_serial
14/54 Test #14: test_core_empty_002_serial ............   Passed    0.05 sec
      Start 15: test_core_min_001_serial
15/54 Test #15: test_core_min_001_serial ..............   Passed    2.15 sec
      Start 16: test_core_min_002_serial
16/54 Test #16: test_core_min_002_serial ..............   Passed   10.64 sec
      Start 17: test_core_min_003_serial
17/54 Test #17: test_core_min_003_serial ..............   Passed    2.25 sec
      Start 18: test_core_min_004_serial
18/54 Test #18: test_core_min_004_serial ..............   Passed    1.17 sec
      Start 19: test_core_min_005_serial
19/54 Test #19: test_core_min_005_serial ..............   Passed    1.17 sec
      Start 20: test_core_min_006_serial
20/54 Test #20: test_core_min_006_serial ..............   Passed    1.16 sec
      Start 21: test_core_min_007_serial
21/54 Test #21: test_core_min_007_serial ..............   Passed    2.25 sec
      Start 22: test_core_min_008_serial
22/54 Test #22: test_core_min_008_serial ..............   Passed    1.16 sec
      Start 23: test_core_min_009_serial
23/54 Test #23: test_core_min_009_serial ..............   Passed    2.33 sec
      Start 24: test_core_processors_001_serial
24/54 Test #24: test_core_processors_001_serial .......   Passed    0.27 sec
      Start 25: test_core_processors_002_serial
25/54 Test #25: test_core_processors_002_serial .......   Passed    0.27 sec
      Start 26: test_core_read_data_001_serial
26/54 Test #26: test_core_read_data_001_serial ........   Passed    0.04 sec
      Start 27: test_core_read_data_002_serial
27/54 Test #27: test_core_read_data_002_serial ........   Passed    0.04 sec
      Start 28: test_core_read_data_003_serial
28/54 Test #28: test_core_read_data_003_serial ........   Passed    0.04 sec
      Start 29: test_core_read_data_004_serial
29/54 Test #29: test_core_read_data_004_serial ........   Passed    0.04 sec
      Start 30: test_core_read_data_005_serial
30/54 Test #30: test_core_read_data_005_serial ........   Passed    0.04 sec
      Start 31: test_core_read_data_006_serial
31/54 Test #31: test_core_read_data_006_serial ........   Passed    0.05 sec
      Start 32: test_core_rerun_001_serial
32/54 Test #32: test_core_rerun_001_serial ............   Passed    2.00 sec
      Start 33: test_core_rerun_002_serial
33/54 Test #33: test_core_rerun_002_serial ............   Passed    2.47 sec
      Start 34: test_core_rerun_003_serial
34/54 Test #34: test_core_rerun_003_serial ............   Passed    1.99 sec
      Start 35: test_core_rerun_004_serial
35/54 Test #35: test_core_rerun_004_serial ............   Passed    2.06 sec
      Start 36: test_core_rerun_005_serial
36/54 Test #36: test_core_rerun_005_serial ............   Passed    2.06 sec
      Start 37: test_core_rerun_006_serial
37/54 Test #37: test_core_rerun_006_serial ............   Passed    2.00 sec
      Start 38: test_core_respa_000_serial
38/54 Test #38: test_core_respa_000_serial ............   Passed   12.82 sec
      Start 39: test_core_respa_001_serial
39/54 Test #39: test_core_respa_001_serial ............   Passed   12.91 sec
      Start 40: test_core_respa_002_serial
40/54 Test #40: test_core_respa_002_serial ............   Passed    0.04 sec
      Start 41: test_core_respa_003_serial
41/54 Test #41: test_core_respa_003_serial ............   Passed    0.04 sec
      Start 42: test_core_respa_004_serial
42/54 Test #42: test_core_respa_004_serial ............   Passed    0.04 sec
      Start 43: test_core_respa_005_serial
43/54 Test #43: test_core_respa_005_serial ............   Passed    0.04 sec
      Start 44: test_core_respa_006_serial
44/54 Test #44: test_core_respa_006_serial ............   Passed    0.04 sec
      Start 45: test_core_respa_007_serial
45/54 Test #45: test_core_respa_007_serial ............   Passed    0.04 sec
      Start 46: test_core_respa_008_serial
46/54 Test #46: test_core_respa_008_serial ............   Passed    0.04 sec
      Start 47: test_core_respa_100_serial
47/54 Test #47: test_core_respa_100_serial ............   Passed   13.56 sec
      Start 48: test_core_respa_101_serial
48/54 Test #48: test_core_respa_101_serial ............   Passed   13.57 sec
      Start 49: test_core_respa_102_serial
49/54 Test #49: test_core_respa_102_serial ............   Passed   13.56 sec
      Start 50: test_core_respa_103_serial
50/54 Test #50: test_core_respa_103_serial ............   Passed   10.75 sec
      Start 51: test_core_respa_200_serial
51/54 Test #51: test_core_respa_200_serial ............   Passed    0.60 sec
      Start 52: test_core_respa_201_serial
52/54 Test #52: test_core_respa_201_serial ............   Passed    0.66 sec
      Start 53: test_core_respa_202_serial
53/54 Test #53: test_core_respa_202_serial ............   Passed    0.73 sec
      Start 54: ShowHelp
54/54 Test #54: ShowHelp ..............................   Passed    0.05 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 124.41 sec
make: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/serial'
+ test -n ''
+ for mpi in '' mpich openmpi
+ test -n mpich
+ module load mpi/mpich-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-aarch64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-aarch64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-aarch64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-aarch64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-aarch64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-aarch64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-aarch64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-aarch64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-aarch64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-aarch64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/etc/modulefiles/mpi/mpich-aarch64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=aWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
BUILDSTDERR: ++ export LD_LIBRARY_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ LOADEDMODULES=mpi/mpich-aarch64
BUILDSTDERR: ++ export LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-aarch64:1;/usr/share/lmod/lmod/share/man:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=:/usr/share/man/mpich-aarch64:/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MODULEPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ MPI_BIN=/usr/lib64/mpich/bin
BUILDSTDERR: ++ export MPI_BIN
BUILDSTDERR: ++ MPI_COMPILER=mpich-aarch64
BUILDSTDERR: ++ export MPI_COMPILER
BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ MPI_HOME=/usr/lib64/mpich
BUILDSTDERR: ++ export MPI_HOME
BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/mpich-aarch64
BUILDSTDERR: ++ export MPI_INCLUDE
BUILDSTDERR: ++ MPI_LIB=/usr/lib64/mpich/lib
BUILDSTDERR: ++ export MPI_LIB
BUILDSTDERR: ++ MPI_MAN=/usr/share/man/mpich-aarch64
BUILDSTDERR: ++ export MPI_MAN
BUILDSTDERR: ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich
BUILDSTDERR: ++ export MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/mpich
BUILDSTDERR: ++ export MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich
BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ MPI_SUFFIX=_mpich
BUILDSTDERR: ++ export MPI_SUFFIX
BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/mpich-aarch64
BUILDSTDERR: ++ export MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ _LMFILES_=/etc/modulefiles/mpi/mpich-aarch64
BUILDSTDERR: ++ export _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=aWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ make -C mpich -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
Running tests...
/usr/bin/ctest --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_5Jun2019/mpich
      Start  1: test_core_balance_001_serial
 1/54 Test  #1: test_core_balance_001_serial ..........   Passed    0.27 sec
      Start  2: test_core_balance_002_serial
 2/54 Test  #2: test_core_balance_002_serial ..........   Passed    0.27 sec
      Start  3: test_core_balance_003_serial
 3/54 Test  #3: test_core_balance_003_serial ..........   Passed    0.27 sec
      Start  4: test_core_balance_004_serial
 4/54 Test  #4: test_core_balance_004_serial ..........   Passed    0.27 sec
      Start  5: test_core_balance_005_serial
 5/54 Test  #5: test_core_balance_005_serial ..........   Passed    0.27 sec
      Start  6: test_core_balance_006_serial
 6/54 Test  #6: test_core_balance_006_serial ..........   Passed    0.27 sec
      Start  7: test_core_comm_style_001_serial
 7/54 Test  #7: test_core_comm_style_001_serial .......   Passed    0.27 sec
      Start  8: test_core_comm_style_002_serial
 8/54 Test  #8: test_core_comm_style_002_serial .......   Passed    0.27 sec
      Start  9: test_core_displace_atoms_000_serial
 9/54 Test  #9: test_core_displace_atoms_000_serial ...   Passed    1.59 sec
      Start 10: test_core_displace_atoms_001_serial
10/54 Test #10: test_core_displace_atoms_001_serial ...   Passed    1.60 sec
      Start 11: test_core_displace_atoms_002_serial
11/54 Test #11: test_core_displace_atoms_002_serial ...   Passed    1.60 sec
      Start 12: test_core_empty_000_serial
12/54 Test #12: test_core_empty_000_serial ............   Passed    0.05 sec
      Start 13: test_core_empty_001_serial
13/54 Test #13: test_core_empty_001_serial ............   Passed    0.04 sec
      Start 14: test_core_empty_002_serial
14/54 Test #14: test_core_empty_002_serial ............   Passed    0.04 sec
      Start 15: test_core_min_001_serial
15/54 Test #15: test_core_min_001_serial ..............   Passed    2.18 sec
      Start 16: test_core_min_002_serial
16/54 Test #16: test_core_min_002_serial ..............   Passed   10.64 sec
      Start 17: test_core_min_003_serial
17/54 Test #17: test_core_min_003_serial ..............   Passed    2.25 sec
      Start 18: test_core_min_004_serial
18/54 Test #18: test_core_min_004_serial ..............   Passed    1.17 sec
      Start 19: test_core_min_005_serial
19/54 Test #19: test_core_min_005_serial ..............   Passed    1.19 sec
      Start 20: test_core_min_006_serial
20/54 Test #20: test_core_min_006_serial ..............   Passed    1.16 sec
      Start 21: test_core_min_007_serial
21/54 Test #21: test_core_min_007_serial ..............   Passed    2.26 sec
      Start 22: test_core_min_008_serial
22/54 Test #22: test_core_min_008_serial ..............   Passed    1.16 sec
      Start 23: test_core_min_009_serial
23/54 Test #23: test_core_min_009_serial ..............   Passed    2.38 sec
      Start 24: test_core_processors_001_serial
24/54 Test #24: test_core_processors_001_serial .......   Passed    0.27 sec
      Start 25: test_core_processors_002_serial
25/54 Test #25: test_core_processors_002_serial .......   Passed    0.27 sec
      Start 26: test_core_read_data_001_serial
26/54 Test #26: test_core_read_data_001_serial ........   Passed    0.04 sec
      Start 27: test_core_read_data_002_serial
27/54 Test #27: test_core_read_data_002_serial ........   Passed    0.04 sec
      Start 28: test_core_read_data_003_serial
28/54 Test #28: test_core_read_data_003_serial ........   Passed    0.04 sec
      Start 29: test_core_read_data_004_serial
29/54 Test #29: test_core_read_data_004_serial ........   Passed    0.05 sec
      Start 30: test_core_read_data_005_serial
30/54 Test #30: test_core_read_data_005_serial ........   Passed    0.05 sec
      Start 31: test_core_read_data_006_serial
31/54 Test #31: test_core_read_data_006_serial ........   Passed    0.05 sec
      Start 32: test_core_rerun_001_serial
32/54 Test #32: test_core_rerun_001_serial ............   Passed    1.99 sec
      Start 33: test_core_rerun_002_serial
33/54 Test #33: test_core_rerun_002_serial ............   Passed    2.47 sec
      Start 34: test_core_rerun_003_serial
34/54 Test #34: test_core_rerun_003_serial ............   Passed    2.00 sec
      Start 35: test_core_rerun_004_serial
35/54 Test #35: test_core_rerun_004_serial ............   Passed    2.06 sec
      Start 36: test_core_rerun_005_serial
36/54 Test #36: test_core_rerun_005_serial ............   Passed    2.07 sec
      Start 37: test_core_rerun_006_serial
37/54 Test #37: test_core_rerun_006_serial ............   Passed    2.01 sec
      Start 38: test_core_respa_000_serial
38/54 Test #38: test_core_respa_000_serial ............   Passed   12.83 sec
      Start 39: test_core_respa_001_serial
39/54 Test #39: test_core_respa_001_serial ............   Passed   12.94 sec
      Start 40: test_core_respa_002_serial
40/54 Test #40: test_core_respa_002_serial ............   Passed    0.04 sec
      Start 41: test_core_respa_003_serial
41/54 Test #41: test_core_respa_003_serial ............   Passed    0.04 sec
      Start 42: test_core_respa_004_serial
42/54 Test #42: test_core_respa_004_serial ............   Passed    0.04 sec
      Start 43: test_core_respa_005_serial
43/54 Test #43: test_core_respa_005_serial ............   Passed    0.04 sec
      Start 44: test_core_respa_006_serial
44/54 Test #44: test_core_respa_006_serial ............   Passed    0.04 sec
      Start 45: test_core_respa_007_serial
45/54 Test #45: test_core_respa_007_serial ............   Passed    0.04 sec
      Start 46: test_core_respa_008_serial
46/54 Test #46: test_core_respa_008_serial ............   Passed    0.04 sec
      Start 47: test_core_respa_100_serial
47/54 Test #47: test_core_respa_100_serial ............   Passed   13.50 sec
      Start 48: test_core_respa_101_serial
48/54 Test #48: test_core_respa_101_serial ............   Passed   13.52 sec
      Start 49: test_core_respa_102_serial
49/54 Test #49: test_core_respa_102_serial ............   Passed   13.81 sec
      Start 50: test_core_respa_103_serial
50/54 Test #50: test_core_respa_103_serial ............   Passed   10.98 sec
      Start 51: test_core_respa_200_serial
51/54 Test #51: test_core_respa_200_serial ............   Passed    0.60 sec
      Start 52: test_core_respa_201_serial
52/54 Test #52: test_core_respa_201_serial ............   Passed    0.67 sec
      Start 53: test_core_respa_202_serial
53/54 Test #53: test_core_respa_202_serial ............   Passed    0.74 sec
      Start 54: ShowHelp
54/54 Test #54: ShowHelp ..............................   Passed    0.05 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 124.91 sec
make: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/mpich'
+ test -n mpich
+ module unload mpi/mpich-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-aarch64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ unset LD_LIBRARY_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ unset LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ unset MPI_BIN
BUILDSTDERR: ++ unset MPI_COMPILER
BUILDSTDERR: ++ unset MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ unset MPI_HOME
BUILDSTDERR: ++ unset MPI_INCLUDE
BUILDSTDERR: ++ unset MPI_LIB
BUILDSTDERR: ++ unset MPI_MAN
BUILDSTDERR: ++ unset MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ unset MPI_SUFFIX
BUILDSTDERR: ++ unset MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ unset _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ for mpi in '' mpich openmpi
+ test -n openmpi
+ module load mpi/openmpi-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-aarch64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-aarch64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-aarch64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-aarch64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-aarch64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-aarch64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-aarch64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-aarch64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64;' export '_LMFILES_;' '_ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXttcGk9e1siZm4iXT0iL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9tcGkvb3Blbm1waS1hYXJjaDY0IixbImZ1bGxOYW1lIl09Im1waS9vcGVubXBpLWFhcmNoNjQiLFsibG9hZE9yZGVyIl09MSxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0wLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJtcGkvb3Blbm1waS1hYXJjaDY0Iix9LH0sbXBhdGhBPXsiL2V0Yy9tb2R1bGVmaWxlcyIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4IiwiL3Vzci9z;' export '_ModuleTable001_;' '_ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
BUILDSTDERR: ++ export LD_LIBRARY_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ LOADEDMODULES=mpi/openmpi-aarch64
BUILDSTDERR: ++ export LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-aarch64:1;/usr/share/lmod/lmod/share/man:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/man/openmpi-aarch64:/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ MPI_BIN=/usr/lib64/openmpi/bin
BUILDSTDERR: ++ export MPI_BIN
BUILDSTDERR: ++ MPI_COMPILER=openmpi-aarch64
BUILDSTDERR: ++ export MPI_COMPILER
BUILDSTDERR: ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
BUILDSTDERR: ++ export MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ MPI_HOME=/usr/lib64/openmpi
BUILDSTDERR: ++ export MPI_HOME
BUILDSTDERR: ++ MPI_INCLUDE=/usr/include/openmpi-aarch64
BUILDSTDERR: ++ export MPI_INCLUDE
BUILDSTDERR: ++ MPI_LIB=/usr/lib64/openmpi/lib
BUILDSTDERR: ++ export MPI_LIB
BUILDSTDERR: ++ MPI_MAN=/usr/share/man/openmpi-aarch64
BUILDSTDERR: ++ export MPI_MAN
BUILDSTDERR: ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
BUILDSTDERR: ++ export MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ MPI_SUFFIX=_openmpi
BUILDSTDERR: ++ export MPI_SUFFIX
BUILDSTDERR: ++ MPI_SYSCONFIG=/etc/openmpi-aarch64
BUILDSTDERR: ++ export MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-aarch64
BUILDSTDERR: ++ export _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
+ make -C openmpi -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
Running tests...
/usr/bin/ctest --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_5Jun2019/openmpi
      Start  1: test_core_balance_001_serial
 1/54 Test  #1: test_core_balance_001_serial ..........   Passed    0.27 sec
      Start  2: test_core_balance_002_serial
 2/54 Test  #2: test_core_balance_002_serial ..........   Passed    0.27 sec
      Start  3: test_core_balance_003_serial
 3/54 Test  #3: test_core_balance_003_serial ..........   Passed    0.27 sec
      Start  4: test_core_balance_004_serial
 4/54 Test  #4: test_core_balance_004_serial ..........   Passed    0.27 sec
      Start  5: test_core_balance_005_serial
 5/54 Test  #5: test_core_balance_005_serial ..........   Passed    0.27 sec
      Start  6: test_core_balance_006_serial
 6/54 Test  #6: test_core_balance_006_serial ..........   Passed    0.27 sec
      Start  7: test_core_comm_style_001_serial
 7/54 Test  #7: test_core_comm_style_001_serial .......   Passed    0.27 sec
      Start  8: test_core_comm_style_002_serial
 8/54 Test  #8: test_core_comm_style_002_serial .......   Passed    0.27 sec
      Start  9: test_core_displace_atoms_000_serial
 9/54 Test  #9: test_core_displace_atoms_000_serial ...   Passed    1.60 sec
      Start 10: test_core_displace_atoms_001_serial
10/54 Test #10: test_core_displace_atoms_001_serial ...   Passed    1.60 sec
      Start 11: test_core_displace_atoms_002_serial
11/54 Test #11: test_core_displace_atoms_002_serial ...   Passed    1.60 sec
      Start 12: test_core_empty_000_serial
12/54 Test #12: test_core_empty_000_serial ............   Passed    0.05 sec
      Start 13: test_core_empty_001_serial
13/54 Test #13: test_core_empty_001_serial ............   Passed    0.05 sec
      Start 14: test_core_empty_002_serial
14/54 Test #14: test_core_empty_002_serial ............   Passed    0.05 sec
      Start 15: test_core_min_001_serial
15/54 Test #15: test_core_min_001_serial ..............   Passed    2.16 sec
      Start 16: test_core_min_002_serial
16/54 Test #16: test_core_min_002_serial ..............   Passed   10.76 sec
      Start 17: test_core_min_003_serial
17/54 Test #17: test_core_min_003_serial ..............   Passed    2.26 sec
      Start 18: test_core_min_004_serial
18/54 Test #18: test_core_min_004_serial ..............   Passed    1.17 sec
      Start 19: test_core_min_005_serial
19/54 Test #19: test_core_min_005_serial ..............   Passed    1.19 sec
      Start 20: test_core_min_006_serial
20/54 Test #20: test_core_min_006_serial ..............   Passed    1.18 sec
      Start 21: test_core_min_007_serial
21/54 Test #21: test_core_min_007_serial ..............   Passed    2.27 sec
      Start 22: test_core_min_008_serial
22/54 Test #22: test_core_min_008_serial ..............   Passed    1.16 sec
      Start 23: test_core_min_009_serial
23/54 Test #23: test_core_min_009_serial ..............   Passed    2.36 sec
      Start 24: test_core_processors_001_serial
24/54 Test #24: test_core_processors_001_serial .......   Passed    0.27 sec
      Start 25: test_core_processors_002_serial
25/54 Test #25: test_core_processors_002_serial .......   Passed    0.30 sec
      Start 26: test_core_read_data_001_serial
26/54 Test #26: test_core_read_data_001_serial ........   Passed    0.05 sec
      Start 27: test_core_read_data_002_serial
27/54 Test #27: test_core_read_data_002_serial ........   Passed    0.06 sec
      Start 28: test_core_read_data_003_serial
28/54 Test #28: test_core_read_data_003_serial ........   Passed    0.05 sec
      Start 29: test_core_read_data_004_serial
29/54 Test #29: test_core_read_data_004_serial ........   Passed    0.06 sec
      Start 30: test_core_read_data_005_serial
30/54 Test #30: test_core_read_data_005_serial ........   Passed    0.06 sec
      Start 31: test_core_read_data_006_serial
31/54 Test #31: test_core_read_data_006_serial ........   Passed    0.05 sec
      Start 32: test_core_rerun_001_serial
32/54 Test #32: test_core_rerun_001_serial ............   Passed    2.13 sec
      Start 33: test_core_rerun_002_serial
33/54 Test #33: test_core_rerun_002_serial ............   Passed    2.52 sec
      Start 34: test_core_rerun_003_serial
34/54 Test #34: test_core_rerun_003_serial ............   Passed    2.01 sec
      Start 35: test_core_rerun_004_serial
35/54 Test #35: test_core_rerun_004_serial ............   Passed    2.09 sec
      Start 36: test_core_rerun_005_serial
36/54 Test #36: test_core_rerun_005_serial ............   Passed    2.09 sec
      Start 37: test_core_rerun_006_serial
37/54 Test #37: test_core_rerun_006_serial ............   Passed    2.03 sec
      Start 38: test_core_respa_000_serial
38/54 Test #38: test_core_respa_000_serial ............   Passed   13.45 sec
      Start 39: test_core_respa_001_serial
39/54 Test #39: test_core_respa_001_serial ............   Passed   13.38 sec
      Start 40: test_core_respa_002_serial
40/54 Test #40: test_core_respa_002_serial ............   Passed    0.05 sec
      Start 41: test_core_respa_003_serial
41/54 Test #41: test_core_respa_003_serial ............   Passed    0.05 sec
      Start 42: test_core_respa_004_serial
42/54 Test #42: test_core_respa_004_serial ............   Passed    0.05 sec
      Start 43: test_core_respa_005_serial
43/54 Test #43: test_core_respa_005_serial ............   Passed    0.05 sec
      Start 44: test_core_respa_006_serial
44/54 Test #44: test_core_respa_006_serial ............   Passed    0.05 sec
      Start 45: test_core_respa_007_serial
45/54 Test #45: test_core_respa_007_serial ............   Passed    0.05 sec
      Start 46: test_core_respa_008_serial
46/54 Test #46: test_core_respa_008_serial ............   Passed    0.05 sec
      Start 47: test_core_respa_100_serial
47/54 Test #47: test_core_respa_100_serial ............   Passed   14.02 sec
      Start 48: test_core_respa_101_serial
48/54 Test #48: test_core_respa_101_serial ............   Passed   13.85 sec
      Start 49: test_core_respa_102_serial
49/54 Test #49: test_core_respa_102_serial ............   Passed   14.09 sec
      Start 50: test_core_respa_103_serial
50/54 Test #50: test_core_respa_103_serial ............   Passed   11.06 sec
      Start 51: test_core_respa_200_serial
51/54 Test #51: test_core_respa_200_serial ............   Passed    0.60 sec
      Start 52: test_core_respa_201_serial
52/54 Test #52: test_core_respa_201_serial ............   Passed    0.67 sec
      Start 53: test_core_respa_202_serial
53/54 Test #53: test_core_respa_202_serial ............   Passed    0.74 sec
      Start 54: ShowHelp
54/54 Test #54: ShowHelp ..............................   Passed    0.05 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 127.74 sec
make: Leaving directory '/builddir/build/BUILD/lammps-stable_5Jun2019/openmpi'
+ test -n openmpi
+ module unload mpi/openmpi-aarch64
BUILDSTDERR: ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-aarch64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
BUILDSTDERR: ++ unset LD_LIBRARY_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT_LOADEDMODULES
BUILDSTDERR: ++ unset LOADEDMODULES
BUILDSTDERR: ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
BUILDSTDERR: ++ export __LMOD_REF_COUNT_MANPATH
BUILDSTDERR: ++ MANPATH=/usr/share/lmod/lmod/share/man
BUILDSTDERR: ++ export MANPATH
BUILDSTDERR: ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
BUILDSTDERR: ++ export MODULEPATH
BUILDSTDERR: ++ unset MPI_BIN
BUILDSTDERR: ++ unset MPI_COMPILER
BUILDSTDERR: ++ unset MPI_FORTRAN_MOD_DIR
BUILDSTDERR: ++ unset MPI_HOME
BUILDSTDERR: ++ unset MPI_INCLUDE
BUILDSTDERR: ++ unset MPI_LIB
BUILDSTDERR: ++ unset MPI_MAN
BUILDSTDERR: ++ unset MPI_PYTHON2_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON3_SITEARCH
BUILDSTDERR: ++ unset MPI_PYTHON_SITEARCH
BUILDSTDERR: ++ unset MPI_SUFFIX
BUILDSTDERR: ++ unset MPI_SYSCONFIG
BUILDSTDERR: ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PATH
BUILDSTDERR: ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
BUILDSTDERR: ++ export PATH
BUILDSTDERR: ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
BUILDSTDERR: ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
BUILDSTDERR: ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
BUILDSTDERR: ++ export PKG_CONFIG_PATH
BUILDSTDERR: ++ unset __LMOD_REF_COUNT__LMFILES_
BUILDSTDERR: ++ unset _LMFILES_
BUILDSTDERR: ++ _ModuleTable001_=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
BUILDSTDERR: ++ export _ModuleTable001_
BUILDSTDERR: ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
BUILDSTDERR: ++ export _ModuleTable002_
BUILDSTDERR: ++ _ModuleTable_Sz_=2
BUILDSTDERR: ++ export _ModuleTable_Sz_
Processing files: lammps-20190605-3.fc30.aarch64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Lc4kV7
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ DOCDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/doc/lammps
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/doc/lammps
+ cp -pr README /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/doc/lammps
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.hSawzV
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps
+ exit 0
Provides: lammps = 20190605-3.fc30 lammps(aarch-64) = 20190605-3.fc30 liblammps.so.0()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libOpenCL.so.1(OPENCL_2.0)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(GOMP_5.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libhdf5.so.10()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libkim-api.so.2()(64bit) liblammps.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libopenblas.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.17)(64bit) libpython3.7m.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) rtld(GNU_HASH)
Processing files: lammps-openmpi-20190605-3.fc30.aarch64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.pYbq4n
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-openmpi
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-openmpi
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-openmpi
+ exit 0
Provides: lammps-openmpi = 20190605-3.fc30 lammps-openmpi(aarch-64) = 20190605-3.fc30 liblammps_openmpi.so.0()(64bit)(openmpi-aarch64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libOpenCL.so.1(OPENCL_2.0)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(GOMP_5.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libhdf5.so.10()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libkim-api.so.2()(64bit) liblammps_openmpi.so.0()(64bit)(openmpi-aarch64) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libopenblas.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.17)(64bit) libpython3.7m.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) rtld(GNU_HASH)
Processing files: lammps-mpich-20190605-3.fc30.aarch64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Cl5rDm
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-mpich
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-mpich
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-mpich
+ exit 0
Provides: lammps-mpich = 20190605-3.fc30 lammps-mpich(aarch-64) = 20190605-3.fc30 liblammps_mpich.so.0()(64bit)(mpich-aarch64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libOpenCL.so.1(OPENCL_2.0)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(GOMP_5.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libhdf5.so.10()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libkim-api.so.2()(64bit) liblammps_mpich.so.0()(64bit)(mpich-aarch64) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libopenblas.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.17)(64bit) libpython3.7m.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) rtld(GNU_HASH)
Processing files: python3-lammps-20190605-3.fc30.aarch64
Provides: python3-lammps = 20190605-3.fc30 python3-lammps(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.7
Processing files: lammps-headers-20190605-3.fc30.aarch64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ZLSkpV
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-headers
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-headers
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-headers
+ exit 0
Provides: lammps-headers = 20190605-3.fc30 lammps-headers(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-devel-20190605-3.fc30.aarch64
Provides: lammps-devel = 20190605-3.fc30 lammps-devel(aarch-64) = 20190605-3.fc30 pkgconfig(liblammps) = 20190605
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config liblammps.so.0()(64bit)
Processing files: lammps-mpich-devel-20190605-3.fc30.aarch64
Provides: lammps-mpich-devel = 20190605-3.fc30 lammps-mpich-devel(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_mpich.so.0()(64bit)(mpich-aarch64)
Processing files: lammps-openmpi-devel-20190605-3.fc30.aarch64
Provides: lammps-openmpi-devel = 20190605-3.fc30 lammps-openmpi-devel(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_openmpi.so.0()(64bit)(openmpi-aarch64)
Processing files: lammps-data-20190605-3.fc30.noarch
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.CzIO0z
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-data
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-data
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64/usr/share/licenses/lammps-data
+ exit 0
Provides: config(lammps-data) = 20190605-3.fc30 lammps-data = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-debugsource-20190605-3.fc30.aarch64
Provides: lammps-debugsource = 20190605-3.fc30 lammps-debugsource(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-debuginfo-20190605-3.fc30.aarch64
Provides: debuginfo(build-id) = 1040156d8de37febd5e14a941577428b05337d15 debuginfo(build-id) = 1502881d96fd9a5591a8da977b788f7f84b2ed96 debuginfo(build-id) = 3fca4e26b6ff0b83eaf2608cc229ca8424ac6d8f lammps-debuginfo = 20190605-3.fc30 lammps-debuginfo(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: lammps-debugsource(aarch-64) = 20190605-3.fc30
Processing files: lammps-openmpi-debuginfo-20190605-3.fc30.aarch64
Provides: debuginfo(build-id) = c8dca5160585352b2cf5dcfe7eab9a3c262cf6fe debuginfo(build-id) = f80d625ea8cdad950908ccba84d5c5ff92deb920 lammps-openmpi-debuginfo = 20190605-3.fc30 lammps-openmpi-debuginfo(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: lammps-debugsource(aarch-64) = 20190605-3.fc30
Processing files: lammps-mpich-debuginfo-20190605-3.fc30.aarch64
Provides: debuginfo(build-id) = 58ae28a4be59d61146d5471b455efd7ce50704d3 debuginfo(build-id) = 9502a86a282315273a0f85f130c6a3b454ed75eb lammps-mpich-debuginfo = 20190605-3.fc30 lammps-mpich-debuginfo(aarch-64) = 20190605-3.fc30
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: lammps-debugsource(aarch-64) = 20190605-3.fc30
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64
Wrote: /builddir/build/RPMS/lammps-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/python3-lammps-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-headers-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-devel-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-devel-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-devel-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-data-20190605-3.fc30.noarch.rpm
Wrote: /builddir/build/RPMS/lammps-debugsource-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-debuginfo-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-debuginfo-20190605-3.fc30.aarch64.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-debuginfo-20190605-3.fc30.aarch64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.vPJcBm
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_5Jun2019
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/lammps-20190605-3.fc30.aarch64
+ exit 0
Child return code was: 0